EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003950 (Gene tree)
Gene ID: 101487742
Gene Symbol: tdp2b (1 of many)
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 67737 bases
Position: chrLG22:16170888-16238624
Accession: 101487742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005102	Exo_endo_phos	PF03372.23	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005326	-	1305	-	ENSMZEP00005005102	361 (aa)	-	-
ENSMZET00005005333	-	1477	XM_004549223	ENSMZEP00005005109	361 (aa)	XP_004549280	UPI000329AF81
ENSMZET00005005312	-	5670	-	ENSMZEP00005005088	361 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005003950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003950	tdp2b	95	53.890	ENSG00000111802	TDP2	93	53.890	Homo_sapiens
ENSMZEG00005003950	tdp2b	71	66.795	ENSAPOG00000018379	-	91	66.795	Acanthochromis_polyacanthus
ENSMZEG00005003950	tdp2b	73	57.143	ENSAMEG00000010230	TDP2	94	57.143	Ailuropoda_melanoleuca
ENSMZEG00005003950	tdp2b	73	65.019	ENSAPEG00000004208	-	94	65.019	Amphiprion_percula
ENSMZEG00005003950	tdp2b	84	60.194	ENSATEG00000010663	-	99	60.194	Anabas_testudineus
ENSMZEG00005003950	tdp2b	94	51.585	ENSACAG00000002332	TDP2	92	51.841	Anolis_carolinensis
ENSMZEG00005003950	tdp2b	95	55.620	ENSANAG00000020033	TDP2	96	54.144	Aotus_nancymaae
ENSMZEG00005003950	tdp2b	74	80.075	ENSACLG00000016148	tdp2b	95	80.075	Astatotilapia_calliptera
ENSMZEG00005003950	tdp2b	80	79.931	ENSACLG00000016132	tdp2b	96	79.931	Astatotilapia_calliptera
ENSMZEG00005003950	tdp2b	82	76.768	ENSACLG00000016174	tdp2b	99	76.768	Astatotilapia_calliptera
ENSMZEG00005003950	tdp2b	98	62.963	ENSAMXG00000011775	tdp2b	99	62.963	Astyanax_mexicanus
ENSMZEG00005003950	tdp2b	71	50.186	ENSAMXG00000036549	tdp2a	87	50.186	Astyanax_mexicanus
ENSMZEG00005003950	tdp2b	95	54.391	ENSBTAG00000000365	TDP2	93	54.391	Bos_taurus
ENSMZEG00005003950	tdp2b	99	54.294	ENSCJAG00000006074	TDP2	96	54.294	Callithrix_jacchus
ENSMZEG00005003950	tdp2b	99	53.699	ENSCJAG00000021963	-	96	53.699	Callithrix_jacchus
ENSMZEG00005003950	tdp2b	95	54.227	ENSCAFG00000010428	TDP2	98	54.227	Canis_familiaris
ENSMZEG00005003950	tdp2b	74	56.929	ENSCAFG00020009994	TDP2	91	56.929	Canis_lupus_dingo
ENSMZEG00005003950	tdp2b	78	54.770	ENSCHIG00000015294	-	90	56.929	Capra_hircus
ENSMZEG00005003950	tdp2b	86	52.244	ENSTSYG00000037199	TDP2	99	52.244	Carlito_syrichta
ENSMZEG00005003950	tdp2b	95	51.685	ENSCPOG00000006390	TDP2	94	52.235	Cavia_porcellus
ENSMZEG00005003950	tdp2b	99	54.294	ENSCCAG00000022734	TDP2	96	54.294	Cebus_capucinus
ENSMZEG00005003950	tdp2b	95	54.755	ENSCATG00000022076	TDP2	92	56.028	Cercocebus_atys
ENSMZEG00005003950	tdp2b	98	52.329	ENSCLAG00000002072	TDP2	98	52.329	Chinchilla_lanigera
ENSMZEG00005003950	tdp2b	99	53.444	ENSCSAG00000007769	TDP2	97	53.444	Chlorocebus_sabaeus
ENSMZEG00005003950	tdp2b	95	52.422	ENSCPBG00000006551	TDP2	86	52.422	Chrysemys_picta_bellii
ENSMZEG00005003950	tdp2b	95	53.890	ENSCANG00000040122	TDP2	97	52.342	Colobus_angolensis_palliatus
ENSMZEG00005003950	tdp2b	95	50.997	ENSCGRG00001000384	Tdp2	95	49.591	Cricetulus_griseus_chok1gshd
ENSMZEG00005003950	tdp2b	95	49.565	ENSCGRG00000010250	Tdp2	97	48.626	Cricetulus_griseus_crigri
ENSMZEG00005003950	tdp2b	99	78.056	ENSCVAG00000003114	tdp2b	99	78.056	Cyprinodon_variegatus
ENSMZEG00005003950	tdp2b	96	63.342	ENSDARG00000035954	tdp2b	96	63.342	Danio_rerio
ENSMZEG00005003950	tdp2b	68	51.822	ENSDARG00000069941	tdp2a	55	51.822	Danio_rerio
ENSMZEG00005003950	tdp2b	95	53.353	ENSDNOG00000044082	TDP2	92	53.353	Dasypus_novemcinctus
ENSMZEG00005003950	tdp2b	73	56.877	ENSETEG00000019096	TDP2	96	56.877	Echinops_telfairi
ENSMZEG00005003950	tdp2b	68	47.773	ENSEBUG00000006535	tdp2a	58	47.773	Eptatretus_burgeri
ENSMZEG00005003950	tdp2b	95	52.991	ENSEASG00005007656	TDP2	93	52.991	Equus_asinus_asinus
ENSMZEG00005003950	tdp2b	95	52.991	ENSECAG00000014264	TDP2	93	52.991	Equus_caballus
ENSMZEG00005003950	tdp2b	95	53.623	ENSEEUG00000010776	TDP2	93	54.179	Erinaceus_europaeus
ENSMZEG00005003950	tdp2b	96	69.003	ENSELUG00000016449	tdp2b	97	69.003	Esox_lucius
ENSMZEG00005003950	tdp2b	73	49.811	ENSELUG00000009321	tdp2a	82	48.496	Esox_lucius
ENSMZEG00005003950	tdp2b	95	54.416	ENSFCAG00000025612	TDP2	93	54.416	Felis_catus
ENSMZEG00005003950	tdp2b	96	48.011	ENSFALG00000004710	TDP2	96	47.091	Ficedula_albicollis
ENSMZEG00005003950	tdp2b	75	55.160	ENSFDAG00000006512	TDP2	96	55.160	Fukomys_damarensis
ENSMZEG00005003950	tdp2b	76	58.545	ENSFHEG00000013560	-	92	58.545	Fundulus_heteroclitus
ENSMZEG00005003950	tdp2b	95	51.567	ENSGALG00000013637	TDP2	94	51.111	Gallus_gallus
ENSMZEG00005003950	tdp2b	95	53.276	ENSGAGG00000002853	TDP2	86	53.276	Gopherus_agassizii
ENSMZEG00005003950	tdp2b	95	53.890	ENSGGOG00000014237	TDP2	92	55.319	Gorilla_gorilla
ENSMZEG00005003950	tdp2b	57	80.676	ENSHBUG00000005421	-	87	80.676	Haplochromis_burtoni
ENSMZEG00005003950	tdp2b	100	96.122	ENSHBUG00000002714	tdp2b	100	96.122	Haplochromis_burtoni
ENSMZEG00005003950	tdp2b	95	54.000	ENSHGLG00000008655	TDP2	94	54.000	Heterocephalus_glaber_female
ENSMZEG00005003950	tdp2b	95	54.000	ENSHGLG00100019087	TDP2	94	54.000	Heterocephalus_glaber_male
ENSMZEG00005003950	tdp2b	99	64.611	ENSIPUG00000013691	tdp2b	99	64.611	Ictalurus_punctatus
ENSMZEG00005003950	tdp2b	95	49.858	ENSJJAG00000021685	Tdp2	97	49.858	Jaculus_jaculus
ENSMZEG00005003950	tdp2b	72	63.218	ENSKMAG00000015485	-	83	63.218	Kryptolebias_marmoratus
ENSMZEG00005003950	tdp2b	96	53.760	ENSLACG00000008852	TDP2	95	53.760	Latimeria_chalumnae
ENSMZEG00005003950	tdp2b	75	61.151	ENSLOCG00000005817	tdp2b	99	61.151	Lepisosteus_oculatus
ENSMZEG00005003950	tdp2b	95	53.561	ENSLAFG00000002567	TDP2	95	53.561	Loxodonta_africana
ENSMZEG00005003950	tdp2b	95	54.755	ENSMFAG00000045296	TDP2	97	53.168	Macaca_fascicularis
ENSMZEG00005003950	tdp2b	95	54.755	ENSMMUG00000009803	TDP2	97	53.168	Macaca_mulatta
ENSMZEG00005003950	tdp2b	95	54.755	ENSMNEG00000038003	TDP2	97	53.168	Macaca_nemestrina
ENSMZEG00005003950	tdp2b	95	55.043	ENSMLEG00000028883	TDP2	94	55.043	Mandrillus_leucophaeus
ENSMZEG00005003950	tdp2b	99	76.602	ENSMAMG00000013654	tdp2b	99	76.602	Mastacembelus_armatus
ENSMZEG00005003950	tdp2b	69	72.289	ENSMZEG00005003980	-	80	72.289	Maylandia_zebra
ENSMZEG00005003950	tdp2b	82	77.778	ENSMZEG00005004126	tdp2b	99	77.778	Maylandia_zebra
ENSMZEG00005003950	tdp2b	72	81.226	ENSMZEG00005004055	tdp2b	87	81.226	Maylandia_zebra
ENSMZEG00005003950	tdp2b	77	76.895	ENSMZEG00005004153	tdp2b	96	76.895	Maylandia_zebra
ENSMZEG00005003950	tdp2b	74	79.323	ENSMZEG00005004103	tdp2b	89	79.323	Maylandia_zebra
ENSMZEG00005003950	tdp2b	75	80.297	ENSMZEG00005004077	tdp2b	91	80.297	Maylandia_zebra
ENSMZEG00005003950	tdp2b	95	52.137	ENSMGAG00000008014	TDP2	91	52.137	Meleagris_gallopavo
ENSMZEG00005003950	tdp2b	95	50.142	ENSMAUG00000014451	Tdp2	99	48.303	Mesocricetus_auratus
ENSMZEG00005003950	tdp2b	99	52.514	ENSMICG00000000039	TDP2	96	52.514	Microcebus_murinus
ENSMZEG00005003950	tdp2b	95	52.137	ENSMOCG00000002823	Tdp2	99	50.131	Microtus_ochrogaster
ENSMZEG00005003950	tdp2b	85	55.521	ENSMODG00000011653	TDP2	94	55.873	Monodelphis_domestica
ENSMZEG00005003950	tdp2b	81	57.627	ENSMALG00000005368	-	99	57.627	Monopterus_albus
ENSMZEG00005003950	tdp2b	95	51.567	MGP_CAROLIEiJ_G0018354	Tdp2	99	49.479	Mus_caroli
ENSMZEG00005003950	tdp2b	95	51.282	ENSMUSG00000035958	Tdp2	99	49.219	Mus_musculus
ENSMZEG00005003950	tdp2b	95	50.142	MGP_PahariEiJ_G0019417	Tdp2	99	48.177	Mus_pahari
ENSMZEG00005003950	tdp2b	98	49.864	MGP_SPRETEiJ_G0019220	Tdp2	94	49.864	Mus_spretus
ENSMZEG00005003950	tdp2b	95	53.561	ENSMPUG00000004516	TDP2	94	53.561	Mustela_putorius_furo
ENSMZEG00005003950	tdp2b	94	48.571	ENSMLUG00000013506	TDP2	93	49.429	Myotis_lucifugus
ENSMZEG00005003950	tdp2b	97	48.199	ENSNGAG00000001375	Tdp2	93	48.199	Nannospalax_galili
ENSMZEG00005003950	tdp2b	95	54.179	ENSNLEG00000002447	TDP2	95	54.179	Nomascus_leucogenys
ENSMZEG00005003950	tdp2b	95	54.391	ENSOPRG00000016299	TDP2	97	54.391	Ochotona_princeps
ENSMZEG00005003950	tdp2b	71	57.143	ENSODEG00000014018	TDP2	87	57.143	Octodon_degus
ENSMZEG00005003950	tdp2b	95	52.975	ENSOCUG00000013773	TDP2	93	52.975	Oryctolagus_cuniculus
ENSMZEG00005003950	tdp2b	74	58.889	ENSORLG00000001661	-	99	58.889	Oryzias_latipes
ENSMZEG00005003950	tdp2b	74	58.889	ENSORLG00020004634	-	99	58.889	Oryzias_latipes_hni
ENSMZEG00005003950	tdp2b	74	50.554	ENSORLG00015008190	-	99	50.554	Oryzias_latipes_hsok
ENSMZEG00005003950	tdp2b	71	59.144	ENSOMEG00000015899	-	93	59.127	Oryzias_melastigma
ENSMZEG00005003950	tdp2b	99	52.877	ENSOGAG00000025303	TDP2	93	53.315	Otolemur_garnettii
ENSMZEG00005003950	tdp2b	95	53.602	ENSPPAG00000029023	TDP2	93	54.965	Pan_paniscus
ENSMZEG00005003950	tdp2b	95	53.561	ENSPPRG00000015398	TDP2	93	53.561	Panthera_pardus
ENSMZEG00005003950	tdp2b	74	55.805	ENSPTIG00000018574	TDP2	91	55.805	Panthera_tigris_altaica
ENSMZEG00005003950	tdp2b	95	53.602	ENSPTRG00000017778	TDP2	92	54.965	Pan_troglodytes
ENSMZEG00005003950	tdp2b	95	54.519	ENSPANG00000017590	TDP2	97	53.134	Papio_anubis
ENSMZEG00005003950	tdp2b	96	66.295	ENSPKIG00000006483	tdp2b	96	66.295	Paramormyrops_kingsleyae
ENSMZEG00005003950	tdp2b	74	56.934	ENSPSIG00000004948	TDP2	94	56.934	Pelodiscus_sinensis
ENSMZEG00005003950	tdp2b	96	50.562	ENSPEMG00000001788	Tdp2	99	49.479	Peromyscus_maniculatus_bairdii
ENSMZEG00005003950	tdp2b	71	44.364	ENSPMAG00000001570	tdp2b	99	44.280	Petromyzon_marinus
ENSMZEG00005003950	tdp2b	95	53.561	ENSPCIG00000007316	TDP2	91	52.603	Phascolarctos_cinereus
ENSMZEG00005003950	tdp2b	73	56.654	ENSPFOG00000017990	-	95	56.654	Poecilia_formosa
ENSMZEG00005003950	tdp2b	73	55.894	ENSPLAG00000019439	-	83	55.894	Poecilia_latipinna
ENSMZEG00005003950	tdp2b	83	52.961	ENSPMEG00000010824	-	98	52.961	Poecilia_mexicana
ENSMZEG00005003950	tdp2b	95	53.602	ENSPPYG00000016282	TDP2	86	53.561	Pongo_abelii
ENSMZEG00005003950	tdp2b	95	53.890	ENSPCOG00000021415	TDP2	94	56.506	Propithecus_coquereli
ENSMZEG00005003950	tdp2b	100	92.798	ENSPNYG00000011532	tdp2b	100	92.798	Pundamilia_nyererei
ENSMZEG00005003950	tdp2b	77	72.355	ENSPNYG00000011504	tdp2b	94	72.355	Pundamilia_nyererei
ENSMZEG00005003950	tdp2b	69	57.028	ENSPNAG00000022162	tdp2a	63	57.028	Pygocentrus_nattereri
ENSMZEG00005003950	tdp2b	95	49.709	ENSRNOG00000018246	Tdp2	99	48.257	Rattus_norvegicus
ENSMZEG00005003950	tdp2b	95	54.179	ENSRBIG00000037119	TDP2	97	52.617	Rhinopithecus_bieti
ENSMZEG00005003950	tdp2b	95	54.467	ENSRROG00000005025	TDP2	92	56.028	Rhinopithecus_roxellana
ENSMZEG00005003950	tdp2b	99	53.501	ENSSBOG00000028734	TDP2	92	56.383	Saimiri_boliviensis_boliviensis
ENSMZEG00005003950	tdp2b	94	54.701	ENSSHAG00000002506	TDP2	90	54.701	Sarcophilus_harrisii
ENSMZEG00005003950	tdp2b	70	52.756	ENSSFOG00015011322	-	71	51.765	Scleropages_formosus
ENSMZEG00005003950	tdp2b	76	52.708	ENSSARG00000013547	TDP2	97	52.708	Sorex_araneus
ENSMZEG00005003950	tdp2b	95	51.275	ENSSPUG00000008288	TDP2	95	51.275	Sphenodon_punctatus
ENSMZEG00005003950	tdp2b	95	52.991	ENSSSCG00000001092	TDP2	93	52.991	Sus_scrofa
ENSMZEG00005003950	tdp2b	70	55.294	ENSTGUG00000009035	TDP2	97	55.294	Taeniopygia_guttata
ENSMZEG00005003950	tdp2b	99	76.323	ENSTRUG00000014347	tdp2b	99	76.323	Takifugu_rubripes
ENSMZEG00005003950	tdp2b	73	58.672	ENSTRUG00000012218	-	94	58.672	Takifugu_rubripes
ENSMZEG00005003950	tdp2b	71	61.303	ENSTNIG00000010260	TDP2	99	61.303	Tetraodon_nigroviridis
ENSMZEG00005003950	tdp2b	99	76.389	ENSTNIG00000017792	tdp2b	99	76.389	Tetraodon_nigroviridis
ENSMZEG00005003950	tdp2b	95	53.409	ENSTTRG00000016376	TDP2	93	54.261	Tursiops_truncatus
ENSMZEG00005003950	tdp2b	95	51.895	ENSUAMG00000025939	TDP2	94	51.895	Ursus_americanus
ENSMZEG00005003950	tdp2b	73	57.143	ENSUMAG00000020111	TDP2	88	57.143	Ursus_maritimus
ENSMZEG00005003950	tdp2b	95	54.958	ENSXETG00000014826	tdp2	93	54.958	Xenopus_tropicalis
ENSMZEG00005003950	tdp2b	69	60.000	ENSXCOG00000010778	-	69	60.000	Xiphophorus_couchianus
ENSMZEG00005003950	tdp2b	69	60.159	ENSXMAG00000022252	-	73	60.159	Xiphophorus_maculatus