EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005003980 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 17677 bases
Position: chrLG22:16176142-16193818
Accession: 105940876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005128	Exo_endo_phos	PF03372.23	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005352	-	1548	XM_024798257	ENSMZEP00005005128	307 (aa)	XP_024654025	-
ENSMZET00005005429	-	1107	-	ENSMZEP00005005203	368 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005003980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005003980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005003980	-	82	47.244	ENSG00000111802	TDP2	83	47.244	Homo_sapiens
ENSMZEG00005003980	-	72	62.162	ENSAPOG00000018379	-	78	62.162	Acanthochromis_polyacanthus
ENSMZEG00005003980	-	80	46.371	ENSAMEG00000010230	TDP2	88	46.371	Ailuropoda_melanoleuca
ENSMZEG00005003980	-	64	55.838	ENSAOCG00000010081	-	86	55.838	Amphiprion_ocellaris
ENSMZEG00005003980	-	73	60.444	ENSAPEG00000004208	-	80	60.444	Amphiprion_percula
ENSMZEG00005003980	-	83	54.864	ENSATEG00000010663	-	83	54.864	Anabas_testudineus
ENSMZEG00005003980	-	80	50.397	ENSACAG00000002332	TDP2	69	50.397	Anolis_carolinensis
ENSMZEG00005003980	-	82	47.222	ENSANAG00000020033	TDP2	69	47.222	Aotus_nancymaae
ENSMZEG00005003980	-	83	94.922	ENSACLG00000016132	tdp2b	86	94.922	Astatotilapia_calliptera
ENSMZEG00005003980	-	74	84.581	ENSACLG00000016148	tdp2b	81	84.581	Astatotilapia_calliptera
ENSMZEG00005003980	-	83	93.750	ENSACLG00000016174	tdp2b	86	93.750	Astatotilapia_calliptera
ENSMZEG00005003980	-	83	56.471	ENSAMXG00000011775	tdp2b	66	56.471	Astyanax_mexicanus
ENSMZEG00005003980	-	77	46.862	ENSAMXG00000036549	tdp2a	76	46.862	Astyanax_mexicanus
ENSMZEG00005003980	-	86	43.820	ENSBTAG00000000365	TDP2	73	43.820	Bos_taurus
ENSMZEG00005003980	-	67	30.986	WBGene00013405	tdpt-1	64	30.802	Caenorhabditis_elegans
ENSMZEG00005003980	-	82	48.016	ENSCJAG00000006074	TDP2	82	48.207	Callithrix_jacchus
ENSMZEG00005003980	-	85	46.415	ENSCJAG00000021963	-	73	46.415	Callithrix_jacchus
ENSMZEG00005003980	-	81	46.586	ENSCAFG00000010428	TDP2	85	46.774	Canis_familiaris
ENSMZEG00005003980	-	80	46.774	ENSCAFG00020009994	TDP2	85	46.774	Canis_lupus_dingo
ENSMZEG00005003980	-	79	46.721	ENSCHIG00000015294	-	82	46.721	Capra_hircus
ENSMZEG00005003980	-	86	45.660	ENSTSYG00000037199	TDP2	85	45.660	Carlito_syrichta
ENSMZEG00005003980	-	83	46.304	ENSCPOG00000006390	TDP2	72	46.304	Cavia_porcellus
ENSMZEG00005003980	-	82	47.222	ENSCCAG00000022734	TDP2	82	47.012	Cebus_capucinus
ENSMZEG00005003980	-	82	46.850	ENSCATG00000022076	TDP2	83	46.457	Cercocebus_atys
ENSMZEG00005003980	-	84	46.154	ENSCLAG00000002072	TDP2	72	46.154	Chinchilla_lanigera
ENSMZEG00005003980	-	82	46.850	ENSCSAG00000007769	TDP2	71	46.850	Chlorocebus_sabaeus
ENSMZEG00005003980	-	78	50.622	ENSCPBG00000006551	TDP2	61	50.622	Chrysemys_picta_bellii
ENSMZEG00005003980	-	82	46.457	ENSCANG00000040122	TDP2	83	46.614	Colobus_angolensis_palliatus
ENSMZEG00005003980	-	74	48.018	ENSCGRG00001000384	Tdp2	61	48.018	Cricetulus_griseus_chok1gshd
ENSMZEG00005003980	-	74	48.018	ENSCGRG00000010250	Tdp2	64	48.018	Cricetulus_griseus_crigri
ENSMZEG00005003980	-	79	64.344	ENSCVAG00000003114	tdp2b	70	62.308	Cyprinodon_variegatus
ENSMZEG00005003980	-	78	58.130	ENSDARG00000035954	tdp2b	64	58.130	Danio_rerio
ENSMZEG00005003980	-	82	46.825	ENSDNOG00000044082	TDP2	68	46.825	Dasypus_novemcinctus
ENSMZEG00005003980	-	80	47.177	ENSETEG00000019096	TDP2	89	47.177	Echinops_telfairi
ENSMZEG00005003980	-	81	40.800	ENSEBUG00000006535	tdp2a	60	40.800	Eptatretus_burgeri
ENSMZEG00005003980	-	86	44.361	ENSEASG00005007656	TDP2	72	44.361	Equus_asinus_asinus
ENSMZEG00005003980	-	86	44.361	ENSECAG00000014264	TDP2	72	44.361	Equus_caballus
ENSMZEG00005003980	-	79	44.747	ENSEEUG00000010776	TDP2	72	44.747	Erinaceus_europaeus
ENSMZEG00005003980	-	77	61.017	ENSELUG00000016449	tdp2b	62	61.017	Esox_lucius
ENSMZEG00005003980	-	82	46.388	ENSELUG00000009321	tdp2a	73	46.383	Esox_lucius
ENSMZEG00005003980	-	86	45.489	ENSFCAG00000025612	TDP2	72	45.489	Felis_catus
ENSMZEG00005003980	-	80	51.210	ENSFALG00000004710	TDP2	68	51.210	Ficedula_albicollis
ENSMZEG00005003980	-	80	47.984	ENSFDAG00000006512	TDP2	85	47.984	Fukomys_damarensis
ENSMZEG00005003980	-	77	53.975	ENSFHEG00000013560	-	82	53.975	Fundulus_heteroclitus
ENSMZEG00005003980	-	80	47.581	ENSGALG00000013637	TDP2	71	45.283	Gallus_gallus
ENSMZEG00005003980	-	78	49.793	ENSGAGG00000002853	TDP2	61	49.793	Gopherus_agassizii
ENSMZEG00005003980	-	83	47.059	ENSGGOG00000014237	TDP2	82	47.410	Gorilla_gorilla
ENSMZEG00005003980	-	69	82.160	ENSHBUG00000005421	-	100	76.151	Haplochromis_burtoni
ENSMZEG00005003980	-	80	77.912	ENSHBUG00000002714	tdp2b	69	77.912	Haplochromis_burtoni
ENSMZEG00005003980	-	82	47.619	ENSHGLG00000008655	TDP2	70	47.619	Heterocephalus_glaber_female
ENSMZEG00005003980	-	82	47.619	ENSHGLG00100019087	TDP2	70	47.619	Heterocephalus_glaber_male
ENSMZEG00005003980	-	80	57.317	ENSIPUG00000013691	tdp2b	64	57.317	Ictalurus_punctatus
ENSMZEG00005003980	-	67	49.519	ENSJJAG00000021685	Tdp2	60	49.519	Jaculus_jaculus
ENSMZEG00005003980	-	70	60.829	ENSKMAG00000015485	-	69	60.829	Kryptolebias_marmoratus
ENSMZEG00005003980	-	83	45.914	ENSLACG00000008852	TDP2	69	45.914	Latimeria_chalumnae
ENSMZEG00005003980	-	79	51.440	ENSLOCG00000005817	tdp2b	86	51.440	Lepisosteus_oculatus
ENSMZEG00005003980	-	86	47.744	ENSLAFG00000002567	TDP2	74	47.744	Loxodonta_africana
ENSMZEG00005003980	-	82	46.850	ENSMFAG00000045296	TDP2	83	46.457	Macaca_fascicularis
ENSMZEG00005003980	-	82	46.850	ENSMMUG00000009803	TDP2	71	46.850	Macaca_mulatta
ENSMZEG00005003980	-	82	46.850	ENSMNEG00000038003	TDP2	83	46.457	Macaca_nemestrina
ENSMZEG00005003980	-	82	46.850	ENSMLEG00000028883	TDP2	82	47.012	Mandrillus_leucophaeus
ENSMZEG00005003980	-	82	62.451	ENSMAMG00000013654	tdp2b	68	62.451	Mastacembelus_armatus
ENSMZEG00005003980	-	89	80.935	ENSMZEG00005004055	tdp2b	91	80.935	Maylandia_zebra
ENSMZEG00005003980	-	83	92.969	ENSMZEG00005004126	tdp2b	86	92.969	Maylandia_zebra
ENSMZEG00005003980	-	74	85.022	ENSMZEG00005004103	tdp2b	75	85.022	Maylandia_zebra
ENSMZEG00005003980	-	80	72.289	ENSMZEG00005003950	tdp2b	69	72.289	Maylandia_zebra
ENSMZEG00005003980	-	78	78.740	ENSMZEG00005004077	tdp2b	86	78.740	Maylandia_zebra
ENSMZEG00005003980	-	77	79.237	ENSMZEG00005004153	tdp2b	83	79.237	Maylandia_zebra
ENSMZEG00005003980	-	84	46.899	ENSMGAG00000008014	TDP2	69	46.899	Meleagris_gallopavo
ENSMZEG00005003980	-	81	45.635	ENSMAUG00000014451	Tdp2	65	45.635	Mesocricetus_auratus
ENSMZEG00005003980	-	85	46.415	ENSMICG00000000039	TDP2	84	47.581	Microcebus_murinus
ENSMZEG00005003980	-	81	46.988	ENSMOCG00000002823	Tdp2	66	47.082	Microtus_ochrogaster
ENSMZEG00005003980	-	70	52.535	ENSMODG00000011653	TDP2	66	52.535	Monodelphis_domestica
ENSMZEG00005003980	-	69	59.906	ENSMALG00000005368	-	71	59.906	Monopterus_albus
ENSMZEG00005003980	-	81	47.390	MGP_CAROLIEiJ_G0018354	Tdp2	60	51.339	Mus_caroli
ENSMZEG00005003980	-	85	46.388	ENSMUSG00000035958	Tdp2	67	46.388	Mus_musculus
ENSMZEG00005003980	-	85	44.487	MGP_PahariEiJ_G0019417	Tdp2	67	44.487	Mus_pahari
ENSMZEG00005003980	-	85	46.768	MGP_SPRETEiJ_G0019220	Tdp2	67	46.768	Mus_spretus
ENSMZEG00005003980	-	76	50.000	ENSMPUG00000004516	TDP2	65	50.000	Mustela_putorius_furo
ENSMZEG00005003980	-	79	47.951	ENSMLUG00000013506	TDP2	70	47.059	Myotis_lucifugus
ENSMZEG00005003980	-	71	47.489	ENSNGAG00000001375	Tdp2	59	47.489	Nannospalax_galili
ENSMZEG00005003980	-	82	47.244	ENSNLEG00000002447	TDP2	80	47.410	Nomascus_leucogenys
ENSMZEG00005003980	-	85	47.148	ENSOPRG00000016299	TDP2	75	47.148	Ochotona_princeps
ENSMZEG00005003980	-	80	46.774	ENSODEG00000014018	TDP2	84	46.774	Octodon_degus
ENSMZEG00005003980	-	82	45.669	ENSOCUG00000013773	TDP2	70	45.669	Oryctolagus_cuniculus
ENSMZEG00005003980	-	74	54.585	ENSORLG00000001661	-	84	54.585	Oryzias_latipes
ENSMZEG00005003980	-	74	54.585	ENSORLG00020004634	-	84	54.585	Oryzias_latipes_hni
ENSMZEG00005003980	-	74	44.493	ENSORLG00015008190	-	81	44.493	Oryzias_latipes_hsok
ENSMZEG00005003980	-	80	51.822	ENSOMEG00000015899	-	84	53.778	Oryzias_melastigma
ENSMZEG00005003980	-	82	47.244	ENSOGAG00000025303	TDP2	69	47.244	Otolemur_garnettii
ENSMZEG00005003980	-	82	46.850	ENSPPAG00000029023	TDP2	83	47.012	Pan_paniscus
ENSMZEG00005003980	-	86	44.737	ENSPPRG00000015398	TDP2	72	44.737	Panthera_pardus
ENSMZEG00005003980	-	80	45.968	ENSPTIG00000018574	TDP2	85	45.968	Panthera_tigris_altaica
ENSMZEG00005003980	-	82	46.850	ENSPTRG00000017778	TDP2	82	47.012	Pan_troglodytes
ENSMZEG00005003980	-	82	47.244	ENSPANG00000017590	TDP2	82	47.410	Papio_anubis
ENSMZEG00005003980	-	79	59.671	ENSPKIG00000006483	tdp2b	66	59.671	Paramormyrops_kingsleyae
ENSMZEG00005003980	-	78	51.037	ENSPSIG00000004948	TDP2	83	51.037	Pelodiscus_sinensis
ENSMZEG00005003980	-	75	48.707	ENSPEMG00000001788	Tdp2	62	48.707	Peromyscus_maniculatus_bairdii
ENSMZEG00005003980	-	70	42.466	ENSPMAG00000001570	tdp2b	80	42.466	Petromyzon_marinus
ENSMZEG00005003980	-	73	50.222	ENSPCIG00000007316	TDP2	59	50.222	Phascolarctos_cinereus
ENSMZEG00005003980	-	75	53.043	ENSPFOG00000017990	-	83	53.043	Poecilia_formosa
ENSMZEG00005003980	-	74	53.070	ENSPLAG00000019439	-	72	53.070	Poecilia_latipinna
ENSMZEG00005003980	-	74	54.148	ENSPMEG00000010824	-	76	54.148	Poecilia_mexicana
ENSMZEG00005003980	-	82	47.244	ENSPPYG00000016282	TDP2	65	47.244	Pongo_abelii
ENSMZEG00005003980	-	85	46.038	ENSPCOG00000021415	TDP2	87	46.988	Propithecus_coquereli
ENSMZEG00005003980	-	78	72.180	ENSPNYG00000011504	tdp2b	87	72.180	Pundamilia_nyererei
ENSMZEG00005003980	-	60	92.391	ENSPNYG00000001944	-	73	92.045	Pundamilia_nyererei
ENSMZEG00005003980	-	80	77.108	ENSPNYG00000011532	tdp2b	69	77.108	Pundamilia_nyererei
ENSMZEG00005003980	-	69	53.521	ENSPNAG00000022162	tdp2a	54	53.521	Pygocentrus_nattereri
ENSMZEG00005003980	-	86	45.113	ENSRNOG00000018246	Tdp2	69	45.113	Rattus_norvegicus
ENSMZEG00005003980	-	82	46.457	ENSRBIG00000037119	TDP2	83	46.063	Rhinopithecus_bieti
ENSMZEG00005003980	-	82	46.850	ENSRROG00000005025	TDP2	83	46.457	Rhinopithecus_roxellana
ENSMZEG00005003980	-	82	47.222	ENSSBOG00000028734	TDP2	82	47.012	Saimiri_boliviensis_boliviensis
ENSMZEG00005003980	-	71	52.752	ENSSHAG00000002506	TDP2	58	52.752	Sarcophilus_harrisii
ENSMZEG00005003980	-	76	52.535	ENSSFOG00015011322	-	62	52.535	Scleropages_formosus
ENSMZEG00005003980	-	80	46.988	ENSSARG00000013547	TDP2	89	46.988	Sorex_araneus
ENSMZEG00005003980	-	80	44.141	ENSSPUG00000008288	TDP2	70	44.141	Sphenodon_punctatus
ENSMZEG00005003980	-	82	46.429	ENSSSCG00000001092	TDP2	69	46.429	Sus_scrofa
ENSMZEG00005003980	-	71	52.294	ENSTGUG00000009035	TDP2	84	52.294	Taeniopygia_guttata
ENSMZEG00005003980	-	73	66.667	ENSTRUG00000014347	tdp2b	63	66.667	Takifugu_rubripes
ENSMZEG00005003980	-	69	57.547	ENSTRUG00000012218	-	74	57.547	Takifugu_rubripes
ENSMZEG00005003980	-	72	58.929	ENSTNIG00000010260	TDP2	85	58.929	Tetraodon_nigroviridis
ENSMZEG00005003980	-	74	68.584	ENSTNIG00000017792	tdp2b	63	68.584	Tetraodon_nigroviridis
ENSMZEG00005003980	-	86	45.660	ENSTTRG00000016376	TDP2	73	45.660	Tursiops_truncatus
ENSMZEG00005003980	-	80	46.371	ENSUAMG00000025939	TDP2	71	46.371	Ursus_americanus
ENSMZEG00005003980	-	80	46.371	ENSUMAG00000020111	TDP2	82	46.371	Ursus_maritimus
ENSMZEG00005003980	-	85	50.189	ENSXETG00000014826	tdp2	70	50.189	Xenopus_tropicalis
ENSMZEG00005003980	-	80	51.807	ENSXCOG00000010778	-	69	51.807	Xiphophorus_couchianus
ENSMZEG00005003980	-	69	56.338	ENSXMAG00000022252	-	62	56.338	Xiphophorus_maculatus