EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004010 (Gene tree)
Gene ID: 101466078
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 16462 bases
Position: chrLG6:27773405-27789866
Accession: 101466078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005158	MMR_HSR1	PF01926.23	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005383	SRL (1 of many)-201	4478	XM_004539115	ENSMZEP00005005158	796 (aa)	XP_004539172	UPI0003298DD7

Gene Model

Click here to download ENSMZEG00005004010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004010	SRL	57	71.648	ENSG00000185739	SRL	99	73.121	Homo_sapiens
ENSMZEG00005004010	SRL	59	73.504	ENSAPOG00000018093	srl	99	74.670	Acanthochromis_polyacanthus
ENSMZEG00005004010	SRL	65	82.739	ENSAPOG00000012432	SRL	99	86.404	Acanthochromis_polyacanthus
ENSMZEG00005004010	SRL	57	72.308	ENSAMEG00000010862	SRL	51	69.358	Ailuropoda_melanoleuca
ENSMZEG00005004010	SRL	58	74.730	ENSACIG00000015799	srl	99	74.514	Amphilophus_citrinellus
ENSMZEG00005004010	SRL	58	89.610	ENSACIG00000015419	SRL	100	89.610	Amphilophus_citrinellus
ENSMZEG00005004010	SRL	56	74.720	ENSAOCG00000007574	srl	100	74.720	Amphiprion_ocellaris
ENSMZEG00005004010	SRL	59	85.684	ENSAOCG00000017049	SRL	99	86.752	Amphiprion_ocellaris
ENSMZEG00005004010	SRL	59	73.291	ENSAPEG00000006911	srl	97	73.291	Amphiprion_percula
ENSMZEG00005004010	SRL	59	81.624	ENSAPEG00000006533	SRL	99	82.906	Amphiprion_percula
ENSMZEG00005004010	SRL	59	73.718	ENSATEG00000024315	srl	97	73.718	Anabas_testudineus
ENSMZEG00005004010	SRL	67	79.533	ENSATEG00000009643	SRL	99	80.251	Anabas_testudineus
ENSMZEG00005004010	SRL	57	71.674	ENSACAG00000016380	SRL	83	71.368	Anolis_carolinensis
ENSMZEG00005004010	SRL	100	99.372	ENSACLG00000024674	SRL	99	99.372	Astatotilapia_calliptera
ENSMZEG00005004010	SRL	59	74.359	ENSACLG00000027685	srl	99	74.624	Astatotilapia_calliptera
ENSMZEG00005004010	SRL	56	80.100	ENSAMXG00000038693	SRL	100	75.604	Astyanax_mexicanus
ENSMZEG00005004010	SRL	58	74.459	ENSAMXG00000018789	srl	89	73.718	Astyanax_mexicanus
ENSMZEG00005004010	SRL	57	72.467	ENSBTAG00000001078	SRL	62	66.538	Bos_taurus
ENSMZEG00005004010	SRL	57	72.088	ENSCJAG00000019750	SRL	93	73.187	Callithrix_jacchus
ENSMZEG00005004010	SRL	59	70.551	ENSCAFG00000019233	SRL	85	70.551	Canis_familiaris
ENSMZEG00005004010	SRL	57	72.308	ENSCAFG00020025024	SRL	59	68.154	Canis_lupus_dingo
ENSMZEG00005004010	SRL	57	72.467	ENSCHIG00000017927	SRL	55	72.467	Capra_hircus
ENSMZEG00005004010	SRL	57	71.868	ENSTSYG00000007919	SRL	99	73.576	Carlito_syrichta
ENSMZEG00005004010	SRL	57	71.868	ENSCPOG00000012643	SRL	94	72.967	Cavia_porcellus
ENSMZEG00005004010	SRL	59	67.021	ENSCCAG00000032646	SRL	100	75.255	Cebus_capucinus
ENSMZEG00005004010	SRL	62	67.387	ENSCATG00000032227	-	93	72.747	Cercocebus_atys
ENSMZEG00005004010	SRL	57	71.868	ENSCLAG00000016242	SRL	94	72.967	Chinchilla_lanigera
ENSMZEG00005004010	SRL	62	67.583	ENSCSAG00000009635	-	50	67.653	Chlorocebus_sabaeus
ENSMZEG00005004010	SRL	50	76.382	ENSCHOG00000001618	SRL	52	76.382	Choloepus_hoffmanni
ENSMZEG00005004010	SRL	58	75.561	ENSCPBG00000026371	SRL	94	70.825	Chrysemys_picta_bellii
ENSMZEG00005004010	SRL	54	54.398	ENSCING00000005231	-	94	55.107	Ciona_intestinalis
ENSMZEG00005004010	SRL	57	71.648	ENSCANG00000035872	SRL	99	73.121	Colobus_angolensis_palliatus
ENSMZEG00005004010	SRL	69	64.376	ENSCGRG00001016630	Srl	94	72.747	Cricetulus_griseus_chok1gshd
ENSMZEG00005004010	SRL	69	64.376	ENSCGRG00000005458	Srl	94	72.747	Cricetulus_griseus_crigri
ENSMZEG00005004010	SRL	58	73.866	ENSCSEG00000016151	srl	96	73.866	Cynoglossus_semilaevis
ENSMZEG00005004010	SRL	57	82.637	ENSCSEG00000011866	SRL	89	83.516	Cynoglossus_semilaevis
ENSMZEG00005004010	SRL	97	64.377	ENSCVAG00000022465	SRL	100	64.436	Cyprinodon_variegatus
ENSMZEG00005004010	SRL	58	75.054	ENSCVAG00000003513	srl	97	75.054	Cyprinodon_variegatus
ENSMZEG00005004010	SRL	58	75.435	ENSDARG00000104587	srl	95	75.435	Danio_rerio
ENSMZEG00005004010	SRL	57	72.747	ENSDNOG00000011643	SRL	55	69.959	Dasypus_novemcinctus
ENSMZEG00005004010	SRL	57	72.747	ENSDORG00000014807	Srl	94	72.747	Dipodomys_ordii
ENSMZEG00005004010	SRL	57	72.907	ENSEASG00005000942	SRL	60	66.860	Equus_asinus_asinus
ENSMZEG00005004010	SRL	57	72.907	ENSECAG00000024219	SRL	96	71.215	Equus_caballus
ENSMZEG00005004010	SRL	71	62.276	ENSELUG00000022266	SRL	54	73.633	Esox_lucius
ENSMZEG00005004010	SRL	57	74.359	ENSELUG00000015616	srl	94	73.932	Esox_lucius
ENSMZEG00005004010	SRL	57	72.308	ENSFCAG00000022075	SRL	97	70.851	Felis_catus
ENSMZEG00005004010	SRL	57	73.289	ENSFALG00000004328	SRL	63	73.068	Ficedula_albicollis
ENSMZEG00005004010	SRL	57	71.868	ENSFDAG00000006199	SRL	94	72.967	Fukomys_damarensis
ENSMZEG00005004010	SRL	100	67.534	ENSFHEG00000011854	SRL	100	85.281	Fundulus_heteroclitus
ENSMZEG00005004010	SRL	57	75.658	ENSFHEG00000011239	srl	96	75.658	Fundulus_heteroclitus
ENSMZEG00005004010	SRL	57	73.448	ENSGMOG00000014954	srl	100	73.448	Gadus_morhua
ENSMZEG00005004010	SRL	57	73.510	ENSGALG00000038884	SRL	93	73.510	Gallus_gallus
ENSMZEG00005004010	SRL	97	66.709	ENSGAFG00000016984	SRL	99	85.714	Gambusia_affinis
ENSMZEG00005004010	SRL	59	74.200	ENSGAFG00000000010	srl	99	74.200	Gambusia_affinis
ENSMZEG00005004010	SRL	57	73.019	ENSGACG00000011332	srl	99	73.019	Gasterosteus_aculeatus
ENSMZEG00005004010	SRL	57	72.747	ENSGGOG00000011312	-	93	72.747	Gorilla_gorilla
ENSMZEG00005004010	SRL	100	99.121	ENSHBUG00000015710	SRL	99	99.121	Haplochromis_burtoni
ENSMZEG00005004010	SRL	59	74.359	ENSHBUG00000007581	srl	99	74.624	Haplochromis_burtoni
ENSMZEG00005004010	SRL	57	71.648	ENSHGLG00000015271	SRL	94	72.747	Heterocephalus_glaber_female
ENSMZEG00005004010	SRL	57	71.648	ENSHGLG00100019378	SRL	94	72.747	Heterocephalus_glaber_male
ENSMZEG00005004010	SRL	100	60.349	ENSHCOG00000001012	SRL	68	80.374	Hippocampus_comes
ENSMZEG00005004010	SRL	59	73.718	ENSHCOG00000008687	srl	99	74.242	Hippocampus_comes
ENSMZEG00005004010	SRL	57	70.961	ENSIPUG00000011609	SRL	100	70.742	Ictalurus_punctatus
ENSMZEG00005004010	SRL	59	72.591	ENSIPUG00000012513	srl	98	72.553	Ictalurus_punctatus
ENSMZEG00005004010	SRL	60	70.737	ENSSTOG00000021151	-	94	72.967	Ictidomys_tridecemlineatus
ENSMZEG00005004010	SRL	57	72.967	ENSJJAG00000016400	Srl	94	72.747	Jaculus_jaculus
ENSMZEG00005004010	SRL	54	79.343	ENSKMAG00000014115	srl	97	74.066	Kryptolebias_marmoratus
ENSMZEG00005004010	SRL	100	69.183	ENSKMAG00000019537	SRL	100	87.225	Kryptolebias_marmoratus
ENSMZEG00005004010	SRL	59	85.043	ENSLBEG00000013811	SRL	98	84.615	Labrus_bergylta
ENSMZEG00005004010	SRL	59	73.718	ENSLBEG00000026643	srl	97	73.718	Labrus_bergylta
ENSMZEG00005004010	SRL	57	73.626	ENSLACG00000002825	SRL	98	73.187	Latimeria_chalumnae
ENSMZEG00005004010	SRL	58	75.271	ENSLOCG00000002644	srl	96	74.837	Lepisosteus_oculatus
ENSMZEG00005004010	SRL	62	67.583	ENSLAFG00000006329	SRL	56	67.583	Loxodonta_africana
ENSMZEG00005004010	SRL	55	71.982	ENSMFAG00000037383	SRL	99	73.121	Macaca_fascicularis
ENSMZEG00005004010	SRL	62	67.583	ENSMNEG00000019236	-	93	72.747	Macaca_nemestrina
ENSMZEG00005004010	SRL	57	66.374	ENSMLEG00000032156	SRL	93	67.473	Mandrillus_leucophaeus
ENSMZEG00005004010	SRL	79	72.588	ENSMAMG00000013756	SRL	74	72.298	Mastacembelus_armatus
ENSMZEG00005004010	SRL	57	74.781	ENSMAMG00000023322	srl	96	73.763	Mastacembelus_armatus
ENSMZEG00005004010	SRL	59	74.359	ENSMZEG00005004548	srl	99	74.624	Maylandia_zebra
ENSMZEG00005004010	SRL	57	73.731	ENSMGAG00000009342	SRL	92	80.000	Meleagris_gallopavo
ENSMZEG00005004010	SRL	62	68.889	ENSMICG00000032307	SRL	94	73.304	Microcebus_murinus
ENSMZEG00005004010	SRL	57	72.527	ENSMOCG00000008208	Srl	94	72.308	Microtus_ochrogaster
ENSMZEG00005004010	SRL	58	73.650	ENSMMOG00000013970	srl	100	73.650	Mola_mola
ENSMZEG00005004010	SRL	57	83.333	ENSMMOG00000021572	SRL	99	82.979	Mola_mola
ENSMZEG00005004010	SRL	59	71.398	ENSMODG00000016380	-	52	71.398	Monodelphis_domestica
ENSMZEG00005004010	SRL	58	73.491	ENSMALG00000005039	srl	99	73.491	Monopterus_albus
ENSMZEG00005004010	SRL	54	84.491	ENSMALG00000000670	SRL	98	84.491	Monopterus_albus
ENSMZEG00005004010	SRL	69	64.247	MGP_CAROLIEiJ_G0020400	Srl	94	72.747	Mus_caroli
ENSMZEG00005004010	SRL	65	66.475	ENSMUSG00000022519	Srl	94	72.747	Mus_musculus
ENSMZEG00005004010	SRL	65	65.926	MGP_PahariEiJ_G0016108	Srl	57	66.111	Mus_pahari
ENSMZEG00005004010	SRL	65	66.475	MGP_SPRETEiJ_G0021294	Srl	94	72.747	Mus_spretus
ENSMZEG00005004010	SRL	57	72.308	ENSMPUG00000015025	SRL	61	67.057	Mustela_putorius_furo
ENSMZEG00005004010	SRL	57	72.747	ENSMLUG00000030733	SRL	56	72.747	Myotis_lucifugus
ENSMZEG00005004010	SRL	57	73.187	ENSNGAG00000019741	Srl	94	72.967	Nannospalax_galili
ENSMZEG00005004010	SRL	61	73.085	ENSNBRG00000023775	srl	99	73.085	Neolamprologus_brichardi
ENSMZEG00005004010	SRL	100	97.616	ENSNBRG00000002422	SRL	99	97.616	Neolamprologus_brichardi
ENSMZEG00005004010	SRL	57	67.692	ENSNLEG00000029051	SRL	93	68.791	Nomascus_leucogenys
ENSMZEG00005004010	SRL	57	68.352	ENSOPRG00000000477	-	52	68.352	Ochotona_princeps
ENSMZEG00005004010	SRL	57	72.527	ENSODEG00000013256	SRL	94	73.626	Octodon_degus
ENSMZEG00005004010	SRL	58	75.000	ENSONIG00000005192	srl	96	75.000	Oreochromis_niloticus
ENSMZEG00005004010	SRL	59	70.737	ENSOCUG00000025140	SRL	51	70.737	Oryctolagus_cuniculus
ENSMZEG00005004010	SRL	59	74.145	ENSORLG00000008291	srl	93	76.904	Oryzias_latipes
ENSMZEG00005004010	SRL	100	63.725	ENSORLG00000015064	SRL	98	83.369	Oryzias_latipes
ENSMZEG00005004010	SRL	59	74.359	ENSORLG00020019784	srl	81	77.150	Oryzias_latipes_hni
ENSMZEG00005004010	SRL	58	84.416	ENSORLG00020018173	SRL	98	83.585	Oryzias_latipes_hni
ENSMZEG00005004010	SRL	58	84.416	ENSORLG00015019063	SRL	98	83.801	Oryzias_latipes_hsok
ENSMZEG00005004010	SRL	59	74.145	ENSORLG00015009342	srl	93	74.145	Oryzias_latipes_hsok
ENSMZEG00005004010	SRL	59	74.359	ENSOMEG00000010006	srl	97	75.831	Oryzias_melastigma
ENSMZEG00005004010	SRL	60	85.863	ENSOMEG00000005682	SRL	99	62.025	Oryzias_melastigma
ENSMZEG00005004010	SRL	64	66.275	ENSOGAG00000029266	SRL	60	66.275	Otolemur_garnettii
ENSMZEG00005004010	SRL	57	72.467	ENSOARG00000003074	SRL	55	72.467	Ovis_aries
ENSMZEG00005004010	SRL	57	72.648	ENSPPAG00000024919	-	99	73.121	Pan_paniscus
ENSMZEG00005004010	SRL	59	69.787	ENSPPRG00000010274	SRL	99	72.893	Panthera_pardus
ENSMZEG00005004010	SRL	59	69.787	ENSPTIG00000015162	SRL	99	72.893	Panthera_tigris_altaica
ENSMZEG00005004010	SRL	57	72.648	ENSPTRG00000007712	SRL	99	73.121	Pan_troglodytes
ENSMZEG00005004010	SRL	57	71.648	ENSPANG00000013804	SRL	95	72.747	Papio_anubis
ENSMZEG00005004010	SRL	99	55.570	ENSPKIG00000024974	SRL	90	72.354	Paramormyrops_kingsleyae
ENSMZEG00005004010	SRL	58	76.139	ENSPKIG00000006405	srl	95	76.139	Paramormyrops_kingsleyae
ENSMZEG00005004010	SRL	86	56.322	ENSPSIG00000008586	SRL	50	72.149	Pelodiscus_sinensis
ENSMZEG00005004010	SRL	57	82.637	ENSPMGG00000023505	-	99	82.198	Periophthalmus_magnuspinnatus
ENSMZEG00005004010	SRL	58	74.784	ENSPMGG00000021081	srl	97	74.784	Periophthalmus_magnuspinnatus
ENSMZEG00005004010	SRL	57	72.747	ENSPEMG00000015842	Srl	94	72.527	Peromyscus_maniculatus_bairdii
ENSMZEG00005004010	SRL	54	64.334	ENSPMAG00000004786	srl	99	63.657	Petromyzon_marinus
ENSMZEG00005004010	SRL	58	73.002	ENSPCIG00000012128	SRL	98	73.002	Phascolarctos_cinereus
ENSMZEG00005004010	SRL	59	73.486	ENSPFOG00000011408	srl	96	73.486	Poecilia_formosa
ENSMZEG00005004010	SRL	59	74.414	ENSPLAG00000008017	srl	99	74.414	Poecilia_latipinna
ENSMZEG00005004010	SRL	97	66.582	ENSPLAG00000002932	SRL	99	85.033	Poecilia_latipinna
ENSMZEG00005004010	SRL	97	66.329	ENSPMEG00000005890	SRL	96	66.324	Poecilia_mexicana
ENSMZEG00005004010	SRL	59	74.414	ENSPMEG00000006745	srl	99	74.414	Poecilia_mexicana
ENSMZEG00005004010	SRL	58	74.946	ENSPREG00000007751	srl	99	74.946	Poecilia_reticulata
ENSMZEG00005004010	SRL	70	78.336	ENSPREG00000000315	SRL	99	85.466	Poecilia_reticulata
ENSMZEG00005004010	SRL	54	72.454	ENSPPYG00000007053	SRL	98	73.611	Pongo_abelii
ENSMZEG00005004010	SRL	57	72.588	ENSPCAG00000003378	-	56	67.387	Procavia_capensis
ENSMZEG00005004010	SRL	57	71.772	ENSPCOG00000023135	SRL	99	73.576	Propithecus_coquereli
ENSMZEG00005004010	SRL	57	72.967	ENSPVAG00000006586	SRL	54	72.967	Pteropus_vampyrus
ENSMZEG00005004010	SRL	100	99.121	ENSPNYG00000003423	SRL	99	99.121	Pundamilia_nyererei
ENSMZEG00005004010	SRL	59	74.359	ENSPNYG00000001200	srl	99	74.624	Pundamilia_nyererei
ENSMZEG00005004010	SRL	62	71.079	ENSPNAG00000023106	srl	99	71.079	Pygocentrus_nattereri
ENSMZEG00005004010	SRL	57	77.974	ENSPNAG00000007361	-	91	77.974	Pygocentrus_nattereri
ENSMZEG00005004010	SRL	67	63.914	ENSRBIG00000042358	SRL	60	63.914	Rhinopithecus_bieti
ENSMZEG00005004010	SRL	57	72.088	ENSSBOG00000029273	SRL	93	73.187	Saimiri_boliviensis_boliviensis
ENSMZEG00005004010	SRL	65	68.269	ENSSHAG00000011715	-	58	66.979	Sarcophilus_harrisii
ENSMZEG00005004010	SRL	57	75.604	ENSSFOG00015009773	srl	94	75.385	Scleropages_formosus
ENSMZEG00005004010	SRL	74	73.846	ENSSFOG00015021327	SRL	54	67.115	Scleropages_formosus
ENSMZEG00005004010	SRL	58	73.856	ENSSMAG00000016274	srl	98	73.753	Scophthalmus_maximus
ENSMZEG00005004010	SRL	57	83.766	ENSSDUG00000009161	SRL	98	83.766	Seriola_dumerili
ENSMZEG00005004010	SRL	57	75.439	ENSSDUG00000010808	srl	98	75.439	Seriola_dumerili
ENSMZEG00005004010	SRL	57	89.231	ENSSLDG00000014601	SRL	99	89.231	Seriola_lalandi_dorsalis
ENSMZEG00005004010	SRL	59	74.359	ENSSLDG00000022024	srl	97	74.837	Seriola_lalandi_dorsalis
ENSMZEG00005004010	SRL	57	72.149	ENSSPUG00000016859	SRL	98	71.930	Sphenodon_punctatus
ENSMZEG00005004010	SRL	57	85.683	ENSSPAG00000014254	SRL	98	85.683	Stegastes_partitus
ENSMZEG00005004010	SRL	58	74.082	ENSSPAG00000019105	srl	95	74.082	Stegastes_partitus
ENSMZEG00005004010	SRL	57	72.467	ENSSSCG00000007949	SRL	98	73.348	Sus_scrofa
ENSMZEG00005004010	SRL	57	73.289	ENSTGUG00000003951	-	97	73.068	Taeniopygia_guttata
ENSMZEG00005004010	SRL	58	73.763	ENSTRUG00000006005	srl	96	73.763	Takifugu_rubripes
ENSMZEG00005004010	SRL	54	85.383	ENSTRUG00000013310	SRL	97	59.296	Takifugu_rubripes
ENSMZEG00005004010	SRL	58	73.548	ENSTNIG00000009739	srl	96	73.548	Tetraodon_nigroviridis
ENSMZEG00005004010	SRL	62	68.485	ENSUAMG00000005701	SRL	58	68.485	Ursus_americanus
ENSMZEG00005004010	SRL	62	68.485	ENSUMAG00000002574	SRL	58	68.485	Ursus_maritimus
ENSMZEG00005004010	SRL	59	70.464	ENSVVUG00000016331	-	51	70.464	Vulpes_vulpes
ENSMZEG00005004010	SRL	57	73.523	ENSXETG00000017313	srl	98	73.523	Xenopus_tropicalis
ENSMZEG00005004010	SRL	55	76.376	ENSXCOG00000010424	srl	97	76.376	Xiphophorus_couchianus
ENSMZEG00005004010	SRL	58	85.745	ENSXCOG00000014584	SRL	99	85.345	Xiphophorus_couchianus
ENSMZEG00005004010	SRL	97	65.990	ENSXMAG00000027598	SRL	100	66.197	Xiphophorus_maculatus
ENSMZEG00005004010	SRL	58	74.624	ENSXMAG00000004625	srl	92	74.624	Xiphophorus_maculatus