EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004055 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b (1 of many)
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2b
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2288 bases
Position: chrLG22:16200308-16202595
Accession: ZDB-GENE-050816-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005238	Exo_endo_phos	PF03372.23	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005465	-	900	-	ENSMZEP00005005238	299 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005004055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004055	tdp2b	83	52.778	ENSG00000111802	TDP2	82	52.778	Homo_sapiens
ENSMZEG00005004055	tdp2b	87	61.597	ENSAPOG00000018379	-	93	61.597	Acanthochromis_polyacanthus
ENSMZEG00005004055	tdp2b	82	52.632	ENSAMEG00000010230	TDP2	88	52.632	Ailuropoda_melanoleuca
ENSMZEG00005004055	tdp2b	56	61.765	ENSAOCG00000010081	-	75	61.765	Amphiprion_ocellaris
ENSMZEG00005004055	tdp2b	89	59.108	ENSAPEG00000004208	-	96	59.108	Amphiprion_percula
ENSMZEG00005004055	tdp2b	91	57.343	ENSATEG00000010663	-	81	61.753	Anabas_testudineus
ENSMZEG00005004055	tdp2b	82	51.417	ENSACAG00000002332	TDP2	67	51.417	Anolis_carolinensis
ENSMZEG00005004055	tdp2b	83	52.381	ENSANAG00000020033	TDP2	69	52.381	Aotus_nancymaae
ENSMZEG00005004055	tdp2b	84	97.233	ENSACLG00000016132	tdp2b	85	97.233	Astatotilapia_calliptera
ENSMZEG00005004055	tdp2b	84	82.072	ENSACLG00000016148	tdp2b	90	82.072	Astatotilapia_calliptera
ENSMZEG00005004055	tdp2b	93	90.210	ENSACLG00000016174	tdp2b	94	90.545	Astatotilapia_calliptera
ENSMZEG00005004055	tdp2b	86	61.390	ENSAMXG00000011775	tdp2b	68	61.628	Astyanax_mexicanus
ENSMZEG00005004055	tdp2b	80	52.917	ENSAMXG00000036549	tdp2a	78	52.917	Astyanax_mexicanus
ENSMZEG00005004055	tdp2b	84	50.391	ENSBTAG00000000365	TDP2	70	50.391	Bos_taurus
ENSMZEG00005004055	tdp2b	82	30.435	WBGene00013405	tdpt-1	67	30.435	Caenorhabditis_elegans
ENSMZEG00005004055	tdp2b	83	52.381	ENSCJAG00000021963	-	69	52.381	Callithrix_jacchus
ENSMZEG00005004055	tdp2b	83	53.175	ENSCJAG00000006074	TDP2	82	53.175	Callithrix_jacchus
ENSMZEG00005004055	tdp2b	82	52.632	ENSCAFG00000010428	TDP2	84	52.632	Canis_familiaris
ENSMZEG00005004055	tdp2b	82	52.632	ENSCAFG00020009994	TDP2	84	52.632	Canis_lupus_dingo
ENSMZEG00005004055	tdp2b	84	50.781	ENSCHIG00000015294	-	86	50.781	Capra_hircus
ENSMZEG00005004055	tdp2b	82	52.632	ENSTSYG00000037199	TDP2	82	51.373	Carlito_syrichta
ENSMZEG00005004055	tdp2b	84	52.362	ENSCPOG00000006390	TDP2	70	52.362	Cavia_porcellus
ENSMZEG00005004055	tdp2b	83	52.381	ENSCCAG00000022734	TDP2	82	52.381	Cebus_capucinus
ENSMZEG00005004055	tdp2b	83	52.381	ENSCATG00000022076	TDP2	82	52.381	Cercocebus_atys
ENSMZEG00005004055	tdp2b	84	52.756	ENSCLAG00000002072	TDP2	70	52.756	Chinchilla_lanigera
ENSMZEG00005004055	tdp2b	83	52.381	ENSCSAG00000007769	TDP2	70	52.381	Chlorocebus_sabaeus
ENSMZEG00005004055	tdp2b	82	53.441	ENSCPBG00000006551	TDP2	63	53.441	Chrysemys_picta_bellii
ENSMZEG00005004055	tdp2b	83	51.984	ENSCANG00000040122	TDP2	83	51.984	Colobus_angolensis_palliatus
ENSMZEG00005004055	tdp2b	82	51.807	ENSCGRG00001000384	Tdp2	66	51.807	Cricetulus_griseus_chok1gshd
ENSMZEG00005004055	tdp2b	82	51.807	ENSCGRG00000010250	Tdp2	70	51.807	Cricetulus_griseus_crigri
ENSMZEG00005004055	tdp2b	84	72.441	ENSCVAG00000003114	tdp2b	71	72.441	Cyprinodon_variegatus
ENSMZEG00005004055	tdp2b	82	64.516	ENSDARG00000035954	tdp2b	64	64.516	Danio_rerio
ENSMZEG00005004055	tdp2b	80	49.378	ENSDARG00000069941	tdp2a	53	49.378	Danio_rerio
ENSMZEG00005004055	tdp2b	82	53.036	ENSDNOG00000044082	TDP2	67	53.036	Dasypus_novemcinctus
ENSMZEG00005004055	tdp2b	82	53.441	ENSETEG00000019096	TDP2	88	53.441	Echinops_telfairi
ENSMZEG00005004055	tdp2b	85	45.174	ENSEBUG00000006535	tdp2a	60	45.174	Eptatretus_burgeri
ENSMZEG00005004055	tdp2b	85	49.416	ENSEASG00005007656	TDP2	70	49.416	Equus_asinus_asinus
ENSMZEG00005004055	tdp2b	82	51.012	ENSECAG00000014264	TDP2	68	51.012	Equus_caballus
ENSMZEG00005004055	tdp2b	82	51.012	ENSEEUG00000010776	TDP2	69	51.012	Erinaceus_europaeus
ENSMZEG00005004055	tdp2b	81	66.122	ENSELUG00000016449	tdp2b	64	66.122	Esox_lucius
ENSMZEG00005004055	tdp2b	83	50.602	ENSELUG00000009321	tdp2a	77	49.799	Esox_lucius
ENSMZEG00005004055	tdp2b	82	52.632	ENSFCAG00000025612	TDP2	68	52.632	Felis_catus
ENSMZEG00005004055	tdp2b	82	54.217	ENSFALG00000004710	TDP2	69	53.815	Ficedula_albicollis
ENSMZEG00005004055	tdp2b	84	53.150	ENSFDAG00000006512	TDP2	87	53.150	Fukomys_damarensis
ENSMZEG00005004055	tdp2b	84	58.661	ENSFHEG00000013560	-	87	58.661	Fundulus_heteroclitus
ENSMZEG00005004055	tdp2b	84	53.333	ENSGALG00000013637	TDP2	69	53.333	Gallus_gallus
ENSMZEG00005004055	tdp2b	82	53.441	ENSGAGG00000002853	TDP2	63	53.441	Gopherus_agassizii
ENSMZEG00005004055	tdp2b	83	52.778	ENSGGOG00000014237	TDP2	82	52.778	Gorilla_gorilla
ENSMZEG00005004055	tdp2b	87	79.693	ENSHBUG00000002714	tdp2b	72	79.693	Haplochromis_burtoni
ENSMZEG00005004055	tdp2b	67	81.773	ENSHBUG00000005421	-	85	81.773	Haplochromis_burtoni
ENSMZEG00005004055	tdp2b	82	53.815	ENSHGLG00000008655	TDP2	69	53.815	Heterocephalus_glaber_female
ENSMZEG00005004055	tdp2b	82	53.815	ENSHGLG00100019087	TDP2	69	53.815	Heterocephalus_glaber_male
ENSMZEG00005004055	tdp2b	84	61.479	ENSIPUG00000013691	tdp2b	68	61.479	Ictalurus_punctatus
ENSMZEG00005004055	tdp2b	80	50.622	ENSJJAG00000021685	Tdp2	68	50.622	Jaculus_jaculus
ENSMZEG00005004055	tdp2b	84	59.055	ENSKMAG00000015485	-	82	59.055	Kryptolebias_marmoratus
ENSMZEG00005004055	tdp2b	82	52.227	ENSLACG00000008852	TDP2	67	52.227	Latimeria_chalumnae
ENSMZEG00005004055	tdp2b	83	55.200	ENSLOCG00000005817	tdp2b	89	55.200	Lepisosteus_oculatus
ENSMZEG00005004055	tdp2b	81	53.252	ENSLAFG00000002567	TDP2	69	53.252	Loxodonta_africana
ENSMZEG00005004055	tdp2b	83	52.381	ENSMFAG00000045296	TDP2	82	52.381	Macaca_fascicularis
ENSMZEG00005004055	tdp2b	83	52.381	ENSMMUG00000009803	TDP2	70	52.381	Macaca_mulatta
ENSMZEG00005004055	tdp2b	83	52.381	ENSMNEG00000038003	TDP2	82	52.381	Macaca_nemestrina
ENSMZEG00005004055	tdp2b	83	52.381	ENSMLEG00000028883	TDP2	82	52.381	Mandrillus_leucophaeus
ENSMZEG00005004055	tdp2b	83	72.000	ENSMAMG00000013654	tdp2b	70	72.000	Mastacembelus_armatus
ENSMZEG00005004055	tdp2b	93	86.014	ENSMZEG00005004103	tdp2b	93	86.182	Maylandia_zebra
ENSMZEG00005004055	tdp2b	84	80.478	ENSMZEG00005004153	tdp2b	89	80.478	Maylandia_zebra
ENSMZEG00005004055	tdp2b	84	97.610	ENSMZEG00005004126	tdp2b	87	96.838	Maylandia_zebra
ENSMZEG00005004055	tdp2b	91	80.935	ENSMZEG00005003980	-	89	80.935	Maylandia_zebra
ENSMZEG00005004055	tdp2b	84	82.470	ENSMZEG00005004077	tdp2b	86	82.470	Maylandia_zebra
ENSMZEG00005004055	tdp2b	87	81.226	ENSMZEG00005003950	tdp2b	72	81.226	Maylandia_zebra
ENSMZEG00005004055	tdp2b	84	53.725	ENSMGAG00000008014	TDP2	69	53.725	Meleagris_gallopavo
ENSMZEG00005004055	tdp2b	82	51.406	ENSMAUG00000014451	Tdp2	66	51.406	Mesocricetus_auratus
ENSMZEG00005004055	tdp2b	92	48.929	ENSMICG00000000039	TDP2	85	51.587	Microcebus_murinus
ENSMZEG00005004055	tdp2b	81	53.252	ENSMOCG00000002823	Tdp2	66	53.252	Microtus_ochrogaster
ENSMZEG00005004055	tdp2b	74	53.778	ENSMODG00000011653	TDP2	67	54.054	Monodelphis_domestica
ENSMZEG00005004055	tdp2b	80	62.917	ENSMALG00000005368	-	82	62.917	Monopterus_albus
ENSMZEG00005004055	tdp2b	81	54.878	MGP_CAROLIEiJ_G0018354	Tdp2	65	54.878	Mus_caroli
ENSMZEG00005004055	tdp2b	81	54.065	ENSMUSG00000035958	Tdp2	65	54.065	Mus_musculus
ENSMZEG00005004055	tdp2b	81	52.846	MGP_PahariEiJ_G0019417	Tdp2	65	52.846	Mus_pahari
ENSMZEG00005004055	tdp2b	81	54.065	MGP_SPRETEiJ_G0019220	Tdp2	65	54.065	Mus_spretus
ENSMZEG00005004055	tdp2b	82	53.036	ENSMPUG00000004516	TDP2	68	53.036	Mustela_putorius_furo
ENSMZEG00005004055	tdp2b	84	50.196	ENSMLUG00000013506	TDP2	70	50.196	Myotis_lucifugus
ENSMZEG00005004055	tdp2b	80	51.452	ENSNGAG00000001375	Tdp2	64	51.452	Nannospalax_galili
ENSMZEG00005004055	tdp2b	83	52.778	ENSNLEG00000002447	TDP2	80	52.778	Nomascus_leucogenys
ENSMZEG00005004055	tdp2b	82	53.036	ENSOPRG00000016299	TDP2	71	53.036	Ochotona_princeps
ENSMZEG00005004055	tdp2b	83	51.984	ENSODEG00000014018	TDP2	85	51.984	Octodon_degus
ENSMZEG00005004055	tdp2b	83	50.794	ENSOCUG00000013773	TDP2	70	50.794	Oryctolagus_cuniculus
ENSMZEG00005004055	tdp2b	83	57.769	ENSORLG00000001661	-	92	57.769	Oryzias_latipes
ENSMZEG00005004055	tdp2b	83	57.769	ENSORLG00020004634	-	92	57.769	Oryzias_latipes_hni
ENSMZEG00005004055	tdp2b	83	49.799	ENSORLG00015008190	-	91	49.799	Oryzias_latipes_hsok
ENSMZEG00005004055	tdp2b	87	53.640	ENSOMEG00000015899	-	95	53.640	Oryzias_melastigma
ENSMZEG00005004055	tdp2b	82	52.632	ENSOGAG00000025303	TDP2	67	52.632	Otolemur_garnettii
ENSMZEG00005004055	tdp2b	83	52.381	ENSPPAG00000029023	TDP2	83	52.381	Pan_paniscus
ENSMZEG00005004055	tdp2b	82	51.417	ENSPPRG00000015398	TDP2	68	51.417	Panthera_pardus
ENSMZEG00005004055	tdp2b	82	51.822	ENSPTIG00000018574	TDP2	84	51.822	Panthera_tigris_altaica
ENSMZEG00005004055	tdp2b	83	52.381	ENSPTRG00000017778	TDP2	82	52.381	Pan_troglodytes
ENSMZEG00005004055	tdp2b	83	52.778	ENSPANG00000017590	TDP2	82	52.778	Papio_anubis
ENSMZEG00005004055	tdp2b	83	65.339	ENSPKIG00000006483	tdp2b	68	65.339	Paramormyrops_kingsleyae
ENSMZEG00005004055	tdp2b	82	53.441	ENSPSIG00000004948	TDP2	85	53.441	Pelodiscus_sinensis
ENSMZEG00005004055	tdp2b	83	52.778	ENSPEMG00000001788	Tdp2	67	52.778	Peromyscus_maniculatus_bairdii
ENSMZEG00005004055	tdp2b	85	42.701	ENSPMAG00000001570	tdp2b	98	42.593	Petromyzon_marinus
ENSMZEG00005004055	tdp2b	82	52.632	ENSPCIG00000007316	TDP2	64	52.632	Phascolarctos_cinereus
ENSMZEG00005004055	tdp2b	88	52.399	ENSPFOG00000017990	-	97	52.399	Poecilia_formosa
ENSMZEG00005004055	tdp2b	89	51.673	ENSPLAG00000019439	-	85	51.673	Poecilia_latipinna
ENSMZEG00005004055	tdp2b	86	54.440	ENSPMEG00000010824	-	87	54.440	Poecilia_mexicana
ENSMZEG00005004055	tdp2b	83	52.381	ENSPPYG00000016282	TDP2	64	52.381	Pongo_abelii
ENSMZEG00005004055	tdp2b	83	51.587	ENSPCOG00000021415	TDP2	88	51.587	Propithecus_coquereli
ENSMZEG00005004055	tdp2b	87	77.395	ENSPNYG00000011532	tdp2b	72	77.395	Pundamilia_nyererei
ENSMZEG00005004055	tdp2b	84	73.978	ENSPNYG00000011504	tdp2b	88	73.978	Pundamilia_nyererei
ENSMZEG00005004055	tdp2b	57	94.706	ENSPNYG00000001944	-	71	94.706	Pundamilia_nyererei
ENSMZEG00005004055	tdp2b	80	55.785	ENSPNAG00000022162	tdp2a	61	55.785	Pygocentrus_nattereri
ENSMZEG00005004055	tdp2b	81	51.626	ENSRNOG00000018246	Tdp2	66	51.626	Rattus_norvegicus
ENSMZEG00005004055	tdp2b	83	51.984	ENSRBIG00000037119	TDP2	83	51.984	Rhinopithecus_bieti
ENSMZEG00005004055	tdp2b	83	52.381	ENSRROG00000005025	TDP2	83	52.381	Rhinopithecus_roxellana
ENSMZEG00005004055	tdp2b	83	52.381	ENSSBOG00000028734	TDP2	82	52.381	Saimiri_boliviensis_boliviensis
ENSMZEG00005004055	tdp2b	86	52.490	ENSSHAG00000002506	TDP2	68	52.490	Sarcophilus_harrisii
ENSMZEG00005004055	tdp2b	85	50.598	ENSSFOG00015011322	-	70	50.000	Scleropages_formosus
ENSMZEG00005004055	tdp2b	84	49.606	ENSSARG00000013547	TDP2	90	49.606	Sorex_araneus
ENSMZEG00005004055	tdp2b	82	48.988	ENSSPUG00000008288	TDP2	67	48.988	Sphenodon_punctatus
ENSMZEG00005004055	tdp2b	85	50.195	ENSSSCG00000001092	TDP2	71	50.965	Sus_scrofa
ENSMZEG00005004055	tdp2b	82	53.414	ENSTGUG00000009035	TDP2	95	53.012	Taeniopygia_guttata
ENSMZEG00005004055	tdp2b	80	60.417	ENSTRUG00000012218	-	84	60.417	Takifugu_rubripes
ENSMZEG00005004055	tdp2b	83	71.713	ENSTRUG00000014347	tdp2b	70	71.713	Takifugu_rubripes
ENSMZEG00005004055	tdp2b	83	72.112	ENSTNIG00000017792	tdp2b	70	72.112	Tetraodon_nigroviridis
ENSMZEG00005004055	tdp2b	83	60.870	ENSTNIG00000010260	TDP2	96	60.870	Tetraodon_nigroviridis
ENSMZEG00005004055	tdp2b	82	52.632	ENSTTRG00000016376	TDP2	68	52.632	Tursiops_truncatus
ENSMZEG00005004055	tdp2b	82	52.632	ENSUAMG00000025939	TDP2	71	52.632	Ursus_americanus
ENSMZEG00005004055	tdp2b	82	52.632	ENSUMAG00000020111	TDP2	82	52.632	Ursus_maritimus
ENSMZEG00005004055	tdp2b	82	53.226	ENSXETG00000014826	tdp2	66	53.226	Xenopus_tropicalis
ENSMZEG00005004055	tdp2b	80	56.790	ENSXCOG00000010778	-	68	56.790	Xiphophorus_couchianus
ENSMZEG00005004055	tdp2b	84	55.512	ENSXMAG00000022252	-	74	55.512	Xiphophorus_maculatus