EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004077 (Gene tree)
Gene ID: 112430138
Gene Symbol: tdp2b (1 of many)
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 5863 bases
Position: chrLG22:16207633-16213495
Accession: 112430138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005275	Exo_endo_phos	PF03372.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005499	-	879	XM_024798258	ENSMZEP00005005275	292 (aa)	XP_024654026	-

Gene Model

Click here to download ENSMZEG00005004077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004077	tdp2b	96	50.709	ENSG00000111802	TDP2	90	51.636	Homo_sapiens
ENSMZEG00005004077	tdp2b	87	65.370	ENSAPOG00000018379	-	90	65.370	Acanthochromis_polyacanthus
ENSMZEG00005004077	tdp2b	90	56.015	ENSAMEG00000010230	TDP2	94	56.015	Ailuropoda_melanoleuca
ENSMZEG00005004077	tdp2b	63	58.511	ENSAOCG00000010081	-	79	58.511	Amphiprion_ocellaris
ENSMZEG00005004077	tdp2b	87	63.672	ENSAPEG00000004208	-	91	63.672	Amphiprion_percula
ENSMZEG00005004077	tdp2b	99	58.983	ENSATEG00000010663	-	96	58.983	Anabas_testudineus
ENSMZEG00005004077	tdp2b	92	54.348	ENSACAG00000002332	TDP2	75	54.348	Anolis_carolinensis
ENSMZEG00005004077	tdp2b	93	52.000	ENSANAG00000020033	TDP2	75	52.000	Aotus_nancymaae
ENSMZEG00005004077	tdp2b	90	99.242	ENSACLG00000016148	tdp2b	95	99.242	Astatotilapia_calliptera
ENSMZEG00005004077	tdp2b	100	77.211	ENSACLG00000016174	tdp2b	90	82.576	Astatotilapia_calliptera
ENSMZEG00005004077	tdp2b	100	77.551	ENSACLG00000016132	tdp2b	94	77.551	Astatotilapia_calliptera
ENSMZEG00005004077	tdp2b	93	48.905	ENSAMXG00000036549	tdp2a	88	48.905	Astyanax_mexicanus
ENSMZEG00005004077	tdp2b	91	64.599	ENSAMXG00000011775	tdp2b	72	64.599	Astyanax_mexicanus
ENSMZEG00005004077	tdp2b	96	52.113	ENSBTAG00000000365	TDP2	77	52.113	Bos_taurus
ENSMZEG00005004077	tdp2b	85	30.888	WBGene00013405	tdpt-1	72	30.435	Caenorhabditis_elegans
ENSMZEG00005004077	tdp2b	98	52.414	ENSCJAG00000006074	TDP2	94	52.414	Callithrix_jacchus
ENSMZEG00005004077	tdp2b	90	53.184	ENSCJAG00000021963	-	73	53.184	Callithrix_jacchus
ENSMZEG00005004077	tdp2b	98	52.941	ENSCAFG00000010428	TDP2	91	56.391	Canis_familiaris
ENSMZEG00005004077	tdp2b	90	56.391	ENSCAFG00020009994	TDP2	91	56.391	Canis_lupus_dingo
ENSMZEG00005004077	tdp2b	96	51.943	ENSCHIG00000015294	-	93	51.943	Capra_hircus
ENSMZEG00005004077	tdp2b	87	54.475	ENSTSYG00000037199	TDP2	95	49.662	Carlito_syrichta
ENSMZEG00005004077	tdp2b	90	54.887	ENSCPOG00000006390	TDP2	74	54.887	Cavia_porcellus
ENSMZEG00005004077	tdp2b	98	51.724	ENSCCAG00000022734	TDP2	94	51.724	Cebus_capucinus
ENSMZEG00005004077	tdp2b	97	50.175	ENSCATG00000022076	TDP2	93	50.175	Cercocebus_atys
ENSMZEG00005004077	tdp2b	90	54.511	ENSCLAG00000002072	TDP2	74	54.511	Chinchilla_lanigera
ENSMZEG00005004077	tdp2b	96	50.709	ENSCSAG00000007769	TDP2	78	50.709	Chlorocebus_sabaeus
ENSMZEG00005004077	tdp2b	97	53.147	ENSCPBG00000006551	TDP2	72	53.147	Chrysemys_picta_bellii
ENSMZEG00005004077	tdp2b	97	49.825	ENSCANG00000040122	TDP2	93	49.825	Colobus_angolensis_palliatus
ENSMZEG00005004077	tdp2b	97	49.135	ENSCGRG00001000384	Tdp2	66	55.242	Cricetulus_griseus_chok1gshd
ENSMZEG00005004077	tdp2b	91	51.838	ENSCGRG00000010250	Tdp2	77	51.838	Cricetulus_griseus_crigri
ENSMZEG00005004077	tdp2b	91	71.642	ENSCVAG00000003114	tdp2b	74	71.642	Cyprinodon_variegatus
ENSMZEG00005004077	tdp2b	91	64.552	ENSDARG00000035954	tdp2b	69	64.552	Danio_rerio
ENSMZEG00005004077	tdp2b	84	52.419	ENSDARG00000069941	tdp2a	55	52.419	Danio_rerio
ENSMZEG00005004077	tdp2b	94	51.079	ENSDNOG00000044082	TDP2	75	51.079	Dasypus_novemcinctus
ENSMZEG00005004077	tdp2b	92	54.779	ENSETEG00000019096	TDP2	95	54.779	Echinops_telfairi
ENSMZEG00005004077	tdp2b	89	46.565	ENSEBUG00000006535	tdp2a	59	46.565	Eptatretus_burgeri
ENSMZEG00005004077	tdp2b	90	53.383	ENSEASG00005007656	TDP2	73	53.383	Equus_asinus_asinus
ENSMZEG00005004077	tdp2b	90	53.759	ENSECAG00000014264	TDP2	73	53.759	Equus_caballus
ENSMZEG00005004077	tdp2b	99	51.203	ENSEEUG00000010776	TDP2	80	51.203	Erinaceus_europaeus
ENSMZEG00005004077	tdp2b	92	48.540	ENSELUG00000009321	tdp2a	83	47.761	Esox_lucius
ENSMZEG00005004077	tdp2b	99	62.457	ENSELUG00000016449	tdp2b	76	62.457	Esox_lucius
ENSMZEG00005004077	tdp2b	90	56.391	ENSFCAG00000025612	TDP2	73	56.391	Felis_catus
ENSMZEG00005004077	tdp2b	92	52.747	ENSFALG00000004710	TDP2	81	51.027	Ficedula_albicollis
ENSMZEG00005004077	tdp2b	95	51.957	ENSFDAG00000006512	TDP2	96	51.957	Fukomys_damarensis
ENSMZEG00005004077	tdp2b	92	58.608	ENSFHEG00000013560	-	94	58.608	Fundulus_heteroclitus
ENSMZEG00005004077	tdp2b	90	52.985	ENSGALG00000013637	TDP2	78	51.557	Gallus_gallus
ENSMZEG00005004077	tdp2b	99	53.242	ENSGAGG00000002853	TDP2	72	54.355	Gopherus_agassizii
ENSMZEG00005004077	tdp2b	97	50.175	ENSGGOG00000014237	TDP2	93	50.175	Gorilla_gorilla
ENSMZEG00005004077	tdp2b	75	96.364	ENSHBUG00000005421	-	100	94.979	Haplochromis_burtoni
ENSMZEG00005004077	tdp2b	91	80.297	ENSHBUG00000002714	tdp2b	75	80.297	Haplochromis_burtoni
ENSMZEG00005004077	tdp2b	92	53.676	ENSHGLG00000008655	TDP2	76	53.676	Heterocephalus_glaber_female
ENSMZEG00005004077	tdp2b	92	53.676	ENSHGLG00100019087	TDP2	76	53.676	Heterocephalus_glaber_male
ENSMZEG00005004077	tdp2b	99	57.823	ENSIPUG00000013691	tdp2b	72	57.823	Ictalurus_punctatus
ENSMZEG00005004077	tdp2b	83	53.878	ENSJJAG00000021685	Tdp2	70	53.878	Jaculus_jaculus
ENSMZEG00005004077	tdp2b	88	63.218	ENSKMAG00000015485	-	84	63.218	Kryptolebias_marmoratus
ENSMZEG00005004077	tdp2b	90	53.558	ENSLACG00000008852	TDP2	71	53.558	Latimeria_chalumnae
ENSMZEG00005004077	tdp2b	91	56.134	ENSLOCG00000005817	tdp2b	96	56.134	Lepisosteus_oculatus
ENSMZEG00005004077	tdp2b	90	55.263	ENSLAFG00000002567	TDP2	74	55.263	Loxodonta_africana
ENSMZEG00005004077	tdp2b	96	50.709	ENSMFAG00000045296	TDP2	90	51.636	Macaca_fascicularis
ENSMZEG00005004077	tdp2b	96	50.709	ENSMMUG00000009803	TDP2	78	50.709	Macaca_mulatta
ENSMZEG00005004077	tdp2b	96	50.709	ENSMNEG00000038003	TDP2	90	51.636	Macaca_nemestrina
ENSMZEG00005004077	tdp2b	97	50.175	ENSMLEG00000028883	TDP2	93	50.175	Mandrillus_leucophaeus
ENSMZEG00005004077	tdp2b	98	69.310	ENSMAMG00000013654	tdp2b	81	69.310	Mastacembelus_armatus
ENSMZEG00005004077	tdp2b	91	80.297	ENSMZEG00005003950	tdp2b	75	80.297	Maylandia_zebra
ENSMZEG00005004077	tdp2b	99	77.740	ENSMZEG00005004126	tdp2b	100	77.740	Maylandia_zebra
ENSMZEG00005004077	tdp2b	93	88.603	ENSMZEG00005004153	tdp2b	97	88.603	Maylandia_zebra
ENSMZEG00005004077	tdp2b	86	78.740	ENSMZEG00005003980	-	78	78.740	Maylandia_zebra
ENSMZEG00005004077	tdp2b	90	78.409	ENSMZEG00005004103	tdp2b	89	78.409	Maylandia_zebra
ENSMZEG00005004077	tdp2b	86	82.470	ENSMZEG00005004055	tdp2b	84	82.470	Maylandia_zebra
ENSMZEG00005004077	tdp2b	98	51.724	ENSMGAG00000008014	TDP2	78	51.724	Meleagris_gallopavo
ENSMZEG00005004077	tdp2b	84	54.435	ENSMAUG00000014451	Tdp2	66	54.435	Mesocricetus_auratus
ENSMZEG00005004077	tdp2b	90	54.887	ENSMICG00000000039	TDP2	89	54.887	Microcebus_murinus
ENSMZEG00005004077	tdp2b	97	50.173	ENSMOCG00000002823	Tdp2	77	50.173	Microtus_ochrogaster
ENSMZEG00005004077	tdp2b	75	56.502	ENSMODG00000011653	TDP2	66	57.407	Monodelphis_domestica
ENSMZEG00005004077	tdp2b	84	65.587	ENSMALG00000005368	-	84	65.587	Monopterus_albus
ENSMZEG00005004077	tdp2b	97	52.098	MGP_CAROLIEiJ_G0018354	Tdp2	76	52.098	Mus_caroli
ENSMZEG00005004077	tdp2b	97	50.865	ENSMUSG00000035958	Tdp2	77	50.865	Mus_musculus
ENSMZEG00005004077	tdp2b	97	49.481	MGP_PahariEiJ_G0019417	Tdp2	77	49.481	Mus_pahari
ENSMZEG00005004077	tdp2b	97	50.865	MGP_SPRETEiJ_G0019220	Tdp2	77	50.865	Mus_spretus
ENSMZEG00005004077	tdp2b	90	56.767	ENSMPUG00000004516	TDP2	73	56.767	Mustela_putorius_furo
ENSMZEG00005004077	tdp2b	86	53.516	ENSMLUG00000013506	TDP2	79	49.650	Myotis_lucifugus
ENSMZEG00005004077	tdp2b	84	54.251	ENSNGAG00000001375	Tdp2	66	54.251	Nannospalax_galili
ENSMZEG00005004077	tdp2b	97	50.175	ENSNLEG00000002447	TDP2	90	50.175	Nomascus_leucogenys
ENSMZEG00005004077	tdp2b	99	51.546	ENSOPRG00000016299	TDP2	83	51.546	Ochotona_princeps
ENSMZEG00005004077	tdp2b	87	55.598	ENSODEG00000014018	TDP2	87	55.598	Octodon_degus
ENSMZEG00005004077	tdp2b	93	51.273	ENSOCUG00000013773	TDP2	76	51.273	Oryctolagus_cuniculus
ENSMZEG00005004077	tdp2b	92	60.073	ENSORLG00000001661	-	100	60.073	Oryzias_latipes
ENSMZEG00005004077	tdp2b	92	60.073	ENSORLG00020004634	-	100	60.073	Oryzias_latipes_hni
ENSMZEG00005004077	tdp2b	92	52.574	ENSORLG00015008190	-	100	52.574	Oryzias_latipes_hsok
ENSMZEG00005004077	tdp2b	87	60.078	ENSOMEG00000015899	-	93	60.400	Oryzias_melastigma
ENSMZEG00005004077	tdp2b	91	52.963	ENSOGAG00000025303	TDP2	72	52.963	Otolemur_garnettii
ENSMZEG00005004077	tdp2b	96	50.709	ENSPPAG00000029023	TDP2	90	51.636	Pan_paniscus
ENSMZEG00005004077	tdp2b	90	54.887	ENSPPRG00000015398	TDP2	73	54.887	Panthera_pardus
ENSMZEG00005004077	tdp2b	90	55.263	ENSPTIG00000018574	TDP2	90	55.263	Panthera_tigris_altaica
ENSMZEG00005004077	tdp2b	97	50.175	ENSPTRG00000017778	TDP2	93	50.175	Pan_troglodytes
ENSMZEG00005004077	tdp2b	87	54.264	ENSPANG00000017590	TDP2	93	50.526	Papio_anubis
ENSMZEG00005004077	tdp2b	87	67.442	ENSPKIG00000006483	tdp2b	70	67.442	Paramormyrops_kingsleyae
ENSMZEG00005004077	tdp2b	86	56.917	ENSPSIG00000004948	TDP2	87	56.917	Pelodiscus_sinensis
ENSMZEG00005004077	tdp2b	97	51.049	ENSPEMG00000001788	Tdp2	66	56.855	Peromyscus_maniculatus_bairdii
ENSMZEG00005004077	tdp2b	86	42.491	ENSPMAG00000001570	tdp2b	97	43.284	Petromyzon_marinus
ENSMZEG00005004077	tdp2b	86	55.118	ENSPCIG00000007316	TDP2	66	55.731	Phascolarctos_cinereus
ENSMZEG00005004077	tdp2b	91	55.224	ENSPFOG00000017990	-	97	55.019	Poecilia_formosa
ENSMZEG00005004077	tdp2b	99	52.174	ENSPLAG00000019439	-	95	52.174	Poecilia_latipinna
ENSMZEG00005004077	tdp2b	90	54.851	ENSPMEG00000010824	-	90	54.851	Poecilia_mexicana
ENSMZEG00005004077	tdp2b	96	50.355	ENSPPYG00000016282	TDP2	71	50.355	Pongo_abelii
ENSMZEG00005004077	tdp2b	95	51.056	ENSPCOG00000021415	TDP2	96	50.909	Propithecus_coquereli
ENSMZEG00005004077	tdp2b	100	79.677	ENSPNYG00000011504	tdp2b	100	79.677	Pundamilia_nyererei
ENSMZEG00005004077	tdp2b	91	86.989	ENSPNYG00000011532	tdp2b	75	86.989	Pundamilia_nyererei
ENSMZEG00005004077	tdp2b	61	77.654	ENSPNYG00000001944	-	73	78.161	Pundamilia_nyererei
ENSMZEG00005004077	tdp2b	84	57.028	ENSPNAG00000022162	tdp2a	63	57.028	Pygocentrus_nattereri
ENSMZEG00005004077	tdp2b	97	49.481	ENSRNOG00000018246	Tdp2	78	49.481	Rattus_norvegicus
ENSMZEG00005004077	tdp2b	96	50.355	ENSRBIG00000037119	TDP2	87	52.434	Rhinopithecus_bieti
ENSMZEG00005004077	tdp2b	96	50.709	ENSRROG00000005025	TDP2	87	52.809	Rhinopithecus_roxellana
ENSMZEG00005004077	tdp2b	98	51.379	ENSSBOG00000028734	TDP2	94	51.379	Saimiri_boliviensis_boliviensis
ENSMZEG00005004077	tdp2b	86	56.299	ENSSHAG00000002506	TDP2	67	56.299	Sarcophilus_harrisii
ENSMZEG00005004077	tdp2b	99	50.000	ENSSFOG00015011322	-	84	48.505	Scleropages_formosus
ENSMZEG00005004077	tdp2b	89	52.453	ENSSARG00000013547	TDP2	94	52.453	Sorex_araneus
ENSMZEG00005004077	tdp2b	94	48.780	ENSSPUG00000008288	TDP2	71	50.752	Sphenodon_punctatus
ENSMZEG00005004077	tdp2b	87	54.826	ENSSSCG00000001092	TDP2	71	54.826	Sus_scrofa
ENSMZEG00005004077	tdp2b	86	54.118	ENSTGUG00000009035	TDP2	97	54.118	Taeniopygia_guttata
ENSMZEG00005004077	tdp2b	96	68.881	ENSTRUG00000014347	tdp2b	79	68.881	Takifugu_rubripes
ENSMZEG00005004077	tdp2b	85	60.643	ENSTRUG00000012218	-	87	60.643	Takifugu_rubripes
ENSMZEG00005004077	tdp2b	91	72.285	ENSTNIG00000017792	tdp2b	74	72.285	Tetraodon_nigroviridis
ENSMZEG00005004077	tdp2b	88	62.069	ENSTNIG00000010260	TDP2	99	62.069	Tetraodon_nigroviridis
ENSMZEG00005004077	tdp2b	87	56.809	ENSTTRG00000016376	TDP2	73	56.015	Tursiops_truncatus
ENSMZEG00005004077	tdp2b	90	56.015	ENSUAMG00000025939	TDP2	76	56.015	Ursus_americanus
ENSMZEG00005004077	tdp2b	90	56.015	ENSUMAG00000020111	TDP2	88	56.015	Ursus_maritimus
ENSMZEG00005004077	tdp2b	99	50.662	ENSXETG00000014826	tdp2	79	50.662	Xenopus_tropicalis
ENSMZEG00005004077	tdp2b	84	58.800	ENSXCOG00000010778	-	69	58.800	Xiphophorus_couchianus
ENSMZEG00005004077	tdp2b	84	59.200	ENSXMAG00000022252	-	72	59.200	Xiphophorus_maculatus