EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004103 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b (1 of many)
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2267 bases
Position: chrLG22:16220728-16222994
Accession: 106676723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005295	Exo_endo_phos	PF03372.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005523	-	843	XM_024798261	ENSMZEP00005005295	280 (aa)	XP_024654029	-

Gene Model

Click here to download ENSMZEG00005004103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004103	tdp2b	97	46.801	ENSG00000111802	TDP2	97	46.801	Homo_sapiens
ENSMZEG00005004103	tdp2b	86	61.004	ENSAPOG00000018379	-	91	61.004	Acanthochromis_polyacanthus
ENSMZEG00005004103	tdp2b	88	48.864	ENSAMEG00000010230	TDP2	94	48.864	Ailuropoda_melanoleuca
ENSMZEG00005004103	tdp2b	56	56.322	ENSAOCG00000010081	-	76	56.322	Amphiprion_ocellaris
ENSMZEG00005004103	tdp2b	88	58.779	ENSAPEG00000004208	-	94	58.779	Amphiprion_percula
ENSMZEG00005004103	tdp2b	97	55.219	ENSATEG00000010663	-	85	59.216	Anabas_testudineus
ENSMZEG00005004103	tdp2b	87	49.057	ENSACAG00000002332	TDP2	72	48.872	Anolis_carolinensis
ENSMZEG00005004103	tdp2b	88	48.881	ENSANAG00000020033	TDP2	73	48.881	Aotus_nancymaae
ENSMZEG00005004103	tdp2b	90	77.736	ENSACLG00000016148	tdp2b	95	77.736	Astatotilapia_calliptera
ENSMZEG00005004103	tdp2b	100	91.837	ENSACLG00000016174	tdp2b	100	91.837	Astatotilapia_calliptera
ENSMZEG00005004103	tdp2b	90	91.386	ENSACLG00000016132	tdp2b	90	91.386	Astatotilapia_calliptera
ENSMZEG00005004103	tdp2b	88	49.237	ENSAMXG00000036549	tdp2a	84	49.237	Astyanax_mexicanus
ENSMZEG00005004103	tdp2b	89	59.176	ENSAMXG00000011775	tdp2b	70	59.176	Astyanax_mexicanus
ENSMZEG00005004103	tdp2b	88	46.792	ENSBTAG00000000365	TDP2	72	46.792	Bos_taurus
ENSMZEG00005004103	tdp2b	84	30.859	WBGene00013405	tdpt-1	72	30.627	Caenorhabditis_elegans
ENSMZEG00005004103	tdp2b	87	48.462	ENSCJAG00000021963	-	71	48.462	Callithrix_jacchus
ENSMZEG00005004103	tdp2b	87	49.231	ENSCJAG00000006074	TDP2	85	49.231	Callithrix_jacchus
ENSMZEG00005004103	tdp2b	96	46.181	ENSCAFG00000010428	TDP2	96	46.181	Canis_familiaris
ENSMZEG00005004103	tdp2b	96	46.181	ENSCAFG00020009994	TDP2	96	46.181	Canis_lupus_dingo
ENSMZEG00005004103	tdp2b	97	45.862	ENSCHIG00000015294	-	97	45.862	Capra_hircus
ENSMZEG00005004103	tdp2b	86	47.860	ENSTSYG00000037199	TDP2	85	47.547	Carlito_syrichta
ENSMZEG00005004103	tdp2b	86	49.035	ENSCPOG00000006390	TDP2	72	49.035	Cavia_porcellus
ENSMZEG00005004103	tdp2b	87	48.462	ENSCCAG00000022734	TDP2	85	48.462	Cebus_capucinus
ENSMZEG00005004103	tdp2b	87	48.846	ENSCATG00000022076	TDP2	85	48.846	Cercocebus_atys
ENSMZEG00005004103	tdp2b	86	49.421	ENSCLAG00000002072	TDP2	72	49.421	Chinchilla_lanigera
ENSMZEG00005004103	tdp2b	87	48.846	ENSCSAG00000007769	TDP2	72	48.846	Chlorocebus_sabaeus
ENSMZEG00005004103	tdp2b	85	50.787	ENSCPBG00000006551	TDP2	64	50.787	Chrysemys_picta_bellii
ENSMZEG00005004103	tdp2b	87	48.462	ENSCANG00000040122	TDP2	85	48.462	Colobus_angolensis_palliatus
ENSMZEG00005004103	tdp2b	85	49.219	ENSCGRG00001000384	Tdp2	68	49.219	Cricetulus_griseus_chok1gshd
ENSMZEG00005004103	tdp2b	85	49.219	ENSCGRG00000010250	Tdp2	72	49.219	Cricetulus_griseus_crigri
ENSMZEG00005004103	tdp2b	88	69.202	ENSCVAG00000003114	tdp2b	73	69.202	Cyprinodon_variegatus
ENSMZEG00005004103	tdp2b	85	61.176	ENSDARG00000035954	tdp2b	66	61.176	Danio_rerio
ENSMZEG00005004103	tdp2b	82	47.773	ENSDARG00000069941	tdp2a	55	47.773	Danio_rerio
ENSMZEG00005004103	tdp2b	86	48.263	ENSDNOG00000044082	TDP2	70	48.263	Dasypus_novemcinctus
ENSMZEG00005004103	tdp2b	84	50.593	ENSETEG00000019096	TDP2	90	50.593	Echinops_telfairi
ENSMZEG00005004103	tdp2b	88	43.893	ENSEBUG00000006535	tdp2a	61	43.893	Eptatretus_burgeri
ENSMZEG00005004103	tdp2b	95	44.366	ENSEASG00005007656	TDP2	76	44.366	Equus_asinus_asinus
ENSMZEG00005004103	tdp2b	95	44.366	ENSECAG00000014264	TDP2	76	44.366	Equus_caballus
ENSMZEG00005004103	tdp2b	84	47.826	ENSEEUG00000010776	TDP2	71	47.826	Erinaceus_europaeus
ENSMZEG00005004103	tdp2b	89	60.377	ENSELUG00000016449	tdp2b	69	60.377	Esox_lucius
ENSMZEG00005004103	tdp2b	89	46.617	ENSELUG00000009321	tdp2a	95	43.607	Esox_lucius
ENSMZEG00005004103	tdp2b	88	48.106	ENSFCAG00000025612	TDP2	72	48.106	Felis_catus
ENSMZEG00005004103	tdp2b	88	51.331	ENSFALG00000004710	TDP2	73	51.331	Ficedula_albicollis
ENSMZEG00005004103	tdp2b	86	50.195	ENSFDAG00000006512	TDP2	88	50.195	Fukomys_damarensis
ENSMZEG00005004103	tdp2b	85	58.730	ENSFHEG00000013560	-	87	58.730	Fundulus_heteroclitus
ENSMZEG00005004103	tdp2b	88	50.763	ENSGALG00000013637	TDP2	70	50.763	Gallus_gallus
ENSMZEG00005004103	tdp2b	84	50.593	ENSGAGG00000002853	TDP2	64	50.593	Gopherus_agassizii
ENSMZEG00005004103	tdp2b	97	46.465	ENSGGOG00000014237	TDP2	97	46.465	Gorilla_gorilla
ENSMZEG00005004103	tdp2b	69	75.962	ENSHBUG00000005421	-	87	75.962	Haplochromis_burtoni
ENSMZEG00005004103	tdp2b	89	77.820	ENSHBUG00000002714	tdp2b	74	77.820	Haplochromis_burtoni
ENSMZEG00005004103	tdp2b	85	50.588	ENSHGLG00000008655	TDP2	71	50.588	Heterocephalus_glaber_female
ENSMZEG00005004103	tdp2b	85	50.588	ENSHGLG00100019087	TDP2	71	50.588	Heterocephalus_glaber_male
ENSMZEG00005004103	tdp2b	89	58.582	ENSIPUG00000013691	tdp2b	71	58.582	Ictalurus_punctatus
ENSMZEG00005004103	tdp2b	81	48.571	ENSJJAG00000021685	Tdp2	70	48.571	Jaculus_jaculus
ENSMZEG00005004103	tdp2b	86	58.755	ENSKMAG00000015485	-	82	58.755	Kryptolebias_marmoratus
ENSMZEG00005004103	tdp2b	85	50.000	ENSLACG00000008852	TDP2	69	50.000	Latimeria_chalumnae
ENSMZEG00005004103	tdp2b	90	51.111	ENSLOCG00000005817	tdp2b	96	51.111	Lepisosteus_oculatus
ENSMZEG00005004103	tdp2b	88	49.618	ENSLAFG00000002567	TDP2	73	49.618	Loxodonta_africana
ENSMZEG00005004103	tdp2b	97	46.801	ENSMFAG00000045296	TDP2	97	46.801	Macaca_fascicularis
ENSMZEG00005004103	tdp2b	87	48.846	ENSMMUG00000009803	TDP2	72	48.846	Macaca_mulatta
ENSMZEG00005004103	tdp2b	87	48.846	ENSMNEG00000038003	TDP2	85	48.846	Macaca_nemestrina
ENSMZEG00005004103	tdp2b	87	48.846	ENSMLEG00000028883	TDP2	85	48.846	Mandrillus_leucophaeus
ENSMZEG00005004103	tdp2b	96	63.986	ENSMAMG00000013654	tdp2b	77	63.986	Mastacembelus_armatus
ENSMZEG00005004103	tdp2b	93	86.182	ENSMZEG00005004055	tdp2b	93	86.014	Maylandia_zebra
ENSMZEG00005004103	tdp2b	89	79.323	ENSMZEG00005003950	tdp2b	74	79.323	Maylandia_zebra
ENSMZEG00005004103	tdp2b	89	78.409	ENSMZEG00005004077	tdp2b	90	78.409	Maylandia_zebra
ENSMZEG00005004103	tdp2b	90	76.604	ENSMZEG00005004153	tdp2b	94	76.604	Maylandia_zebra
ENSMZEG00005004103	tdp2b	96	85.467	ENSMZEG00005004126	tdp2b	91	91.011	Maylandia_zebra
ENSMZEG00005004103	tdp2b	75	85.022	ENSMZEG00005003980	-	74	85.022	Maylandia_zebra
ENSMZEG00005004103	tdp2b	88	51.145	ENSMGAG00000008014	TDP2	70	51.145	Meleagris_gallopavo
ENSMZEG00005004103	tdp2b	85	48.438	ENSMAUG00000014451	Tdp2	68	48.438	Mesocricetus_auratus
ENSMZEG00005004103	tdp2b	88	48.106	ENSMICG00000000039	TDP2	89	47.925	Microcebus_murinus
ENSMZEG00005004103	tdp2b	88	49.621	ENSMOCG00000002823	Tdp2	67	50.198	Microtus_ochrogaster
ENSMZEG00005004103	tdp2b	74	50.446	ENSMODG00000011653	TDP2	66	51.152	Monodelphis_domestica
ENSMZEG00005004103	tdp2b	83	59.109	ENSMALG00000005368	-	84	59.109	Monopterus_albus
ENSMZEG00005004103	tdp2b	84	51.779	MGP_CAROLIEiJ_G0018354	Tdp2	67	51.779	Mus_caroli
ENSMZEG00005004103	tdp2b	88	50.379	ENSMUSG00000035958	Tdp2	69	50.379	Mus_musculus
ENSMZEG00005004103	tdp2b	84	49.802	MGP_PahariEiJ_G0019417	Tdp2	67	49.802	Mus_pahari
ENSMZEG00005004103	tdp2b	88	50.379	MGP_SPRETEiJ_G0019220	Tdp2	69	50.379	Mus_spretus
ENSMZEG00005004103	tdp2b	88	48.864	ENSMPUG00000004516	TDP2	73	48.864	Mustela_putorius_furo
ENSMZEG00005004103	tdp2b	89	47.368	ENSMLUG00000013506	TDP2	73	47.368	Myotis_lucifugus
ENSMZEG00005004103	tdp2b	82	48.988	ENSNGAG00000001375	Tdp2	66	48.988	Nannospalax_galili
ENSMZEG00005004103	tdp2b	97	46.465	ENSNLEG00000002447	TDP2	94	46.465	Nomascus_leucogenys
ENSMZEG00005004103	tdp2b	95	45.775	ENSOPRG00000016299	TDP2	80	45.775	Ochotona_princeps
ENSMZEG00005004103	tdp2b	86	48.649	ENSODEG00000014018	TDP2	87	48.649	Octodon_degus
ENSMZEG00005004103	tdp2b	88	46.970	ENSOCUG00000013773	TDP2	73	46.970	Oryctolagus_cuniculus
ENSMZEG00005004103	tdp2b	89	54.307	ENSORLG00000001661	-	98	54.307	Oryzias_latipes
ENSMZEG00005004103	tdp2b	89	54.307	ENSORLG00020004634	-	98	54.307	Oryzias_latipes_hni
ENSMZEG00005004103	tdp2b	89	46.792	ENSORLG00015008190	-	97	46.792	Oryzias_latipes_hsok
ENSMZEG00005004103	tdp2b	89	53.208	ENSOMEG00000015899	-	93	53.600	Oryzias_melastigma
ENSMZEG00005004103	tdp2b	88	48.473	ENSOGAG00000025303	TDP2	70	48.473	Otolemur_garnettii
ENSMZEG00005004103	tdp2b	87	48.462	ENSPPAG00000029023	TDP2	85	48.462	Pan_paniscus
ENSMZEG00005004103	tdp2b	88	47.727	ENSPPRG00000015398	TDP2	72	47.727	Panthera_pardus
ENSMZEG00005004103	tdp2b	88	48.106	ENSPTIG00000018574	TDP2	90	48.106	Panthera_tigris_altaica
ENSMZEG00005004103	tdp2b	97	46.128	ENSPTRG00000017778	TDP2	97	46.128	Pan_troglodytes
ENSMZEG00005004103	tdp2b	87	49.231	ENSPANG00000017590	TDP2	85	49.231	Papio_anubis
ENSMZEG00005004103	tdp2b	90	61.338	ENSPKIG00000006483	tdp2b	73	61.338	Paramormyrops_kingsleyae
ENSMZEG00005004103	tdp2b	84	50.593	ENSPSIG00000004948	TDP2	87	50.593	Pelodiscus_sinensis
ENSMZEG00005004103	tdp2b	87	49.808	ENSPEMG00000001788	Tdp2	69	49.808	Peromyscus_maniculatus_bairdii
ENSMZEG00005004103	tdp2b	85	40.659	ENSPMAG00000001570	tdp2b	97	40.672	Petromyzon_marinus
ENSMZEG00005004103	tdp2b	85	50.000	ENSPCIG00000007316	TDP2	66	50.198	Phascolarctos_cinereus
ENSMZEG00005004103	tdp2b	88	51.515	ENSPFOG00000017990	-	95	51.515	Poecilia_formosa
ENSMZEG00005004103	tdp2b	94	50.179	ENSPLAG00000019439	-	87	50.179	Poecilia_latipinna
ENSMZEG00005004103	tdp2b	97	49.324	ENSPMEG00000010824	-	99	49.158	Poecilia_mexicana
ENSMZEG00005004103	tdp2b	87	48.462	ENSPPYG00000016282	TDP2	66	48.462	Pongo_abelii
ENSMZEG00005004103	tdp2b	91	46.643	ENSPCOG00000021415	TDP2	99	46.643	Propithecus_coquereli
ENSMZEG00005004103	tdp2b	90	70.671	ENSPNYG00000011504	tdp2b	92	70.671	Pundamilia_nyererei
ENSMZEG00005004103	tdp2b	58	86.286	ENSPNYG00000001944	-	82	76.650	Pundamilia_nyererei
ENSMZEG00005004103	tdp2b	89	75.188	ENSPNYG00000011532	tdp2b	74	75.188	Pundamilia_nyererei
ENSMZEG00005004103	tdp2b	83	54.217	ENSPNAG00000022162	tdp2a	63	54.217	Pygocentrus_nattereri
ENSMZEG00005004103	tdp2b	84	49.407	ENSRNOG00000018246	Tdp2	68	49.407	Rattus_norvegicus
ENSMZEG00005004103	tdp2b	87	48.462	ENSRBIG00000037119	TDP2	85	48.462	Rhinopithecus_bieti
ENSMZEG00005004103	tdp2b	87	48.462	ENSRROG00000005025	TDP2	85	48.462	Rhinopithecus_roxellana
ENSMZEG00005004103	tdp2b	87	48.462	ENSSBOG00000028734	TDP2	85	48.462	Saimiri_boliviensis_boliviensis
ENSMZEG00005004103	tdp2b	85	50.980	ENSSHAG00000002506	TDP2	68	50.980	Sarcophilus_harrisii
ENSMZEG00005004103	tdp2b	87	48.425	ENSSFOG00015011322	-	71	47.451	Scleropages_formosus
ENSMZEG00005004103	tdp2b	89	45.865	ENSSARG00000013547	TDP2	95	45.865	Sorex_araneus
ENSMZEG00005004103	tdp2b	88	45.455	ENSSPUG00000008288	TDP2	71	45.455	Sphenodon_punctatus
ENSMZEG00005004103	tdp2b	87	47.308	ENSSSCG00000001092	TDP2	71	47.308	Sus_scrofa
ENSMZEG00005004103	tdp2b	86	51.751	ENSTGUG00000009035	TDP2	98	51.751	Taeniopygia_guttata
ENSMZEG00005004103	tdp2b	88	67.557	ENSTRUG00000014347	tdp2b	73	67.557	Takifugu_rubripes
ENSMZEG00005004103	tdp2b	84	57.028	ENSTRUG00000012218	-	87	57.028	Takifugu_rubripes
ENSMZEG00005004103	tdp2b	86	57.471	ENSTNIG00000010260	TDP2	99	57.471	Tetraodon_nigroviridis
ENSMZEG00005004103	tdp2b	91	65.809	ENSTNIG00000017792	tdp2b	75	65.809	Tetraodon_nigroviridis
ENSMZEG00005004103	tdp2b	84	49.802	ENSTTRG00000016376	TDP2	79	46.690	Tursiops_truncatus
ENSMZEG00005004103	tdp2b	88	48.864	ENSUAMG00000025939	TDP2	76	48.864	Ursus_americanus
ENSMZEG00005004103	tdp2b	88	48.864	ENSUMAG00000020111	TDP2	87	48.864	Ursus_maritimus
ENSMZEG00005004103	tdp2b	93	46.953	ENSXETG00000014826	tdp2	74	46.953	Xenopus_tropicalis
ENSMZEG00005004103	tdp2b	83	55.200	ENSXCOG00000010778	-	69	55.200	Xiphophorus_couchianus
ENSMZEG00005004103	tdp2b	90	53.333	ENSXMAG00000022252	-	77	53.333	Xiphophorus_maculatus