EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004153 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b (1 of many)
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4306 bases
Position: chrLG22:16252836-16257141
Accession: 101470005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005361	Exo_endo_phos	PF03372.23	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005590	-	846	XM_004548142	ENSMZEP00005005361	281 (aa)	XP_004548199	-

Gene Model

Click here to download ENSMZEG00005004153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004153	tdp2b	91	53.008	ENSG00000111802	TDP2	87	53.008	Homo_sapiens
ENSMZEG00005004153	tdp2b	91	64.479	ENSAPOG00000018379	-	91	64.479	Acanthochromis_polyacanthus
ENSMZEG00005004153	tdp2b	93	54.545	ENSAMEG00000010230	TDP2	94	54.545	Ailuropoda_melanoleuca
ENSMZEG00005004153	tdp2b	63	61.111	ENSAOCG00000010081	-	79	61.111	Amphiprion_ocellaris
ENSMZEG00005004153	tdp2b	92	61.832	ENSAPEG00000004208	-	94	61.832	Amphiprion_percula
ENSMZEG00005004153	tdp2b	99	59.717	ENSATEG00000010663	-	92	58.719	Anabas_testudineus
ENSMZEG00005004153	tdp2b	95	52.899	ENSACAG00000002332	TDP2	75	52.899	Anolis_carolinensis
ENSMZEG00005004153	tdp2b	96	52.158	ENSANAG00000020033	TDP2	76	52.158	Aotus_nancymaae
ENSMZEG00005004153	tdp2b	95	89.513	ENSACLG00000016148	tdp2b	96	89.513	Astatotilapia_calliptera
ENSMZEG00005004153	tdp2b	98	79.348	ENSACLG00000016132	tdp2b	93	79.348	Astatotilapia_calliptera
ENSMZEG00005004153	tdp2b	98	79.348	ENSACLG00000016174	tdp2b	93	79.348	Astatotilapia_calliptera
ENSMZEG00005004153	tdp2b	93	64.444	ENSAMXG00000011775	tdp2b	71	64.444	Astyanax_mexicanus
ENSMZEG00005004153	tdp2b	95	49.259	ENSAMXG00000036549	tdp2a	87	49.259	Astyanax_mexicanus
ENSMZEG00005004153	tdp2b	98	51.613	ENSBTAG00000000365	TDP2	76	51.613	Bos_taurus
ENSMZEG00005004153	tdp2b	96	52.158	ENSCJAG00000021963	-	76	52.158	Callithrix_jacchus
ENSMZEG00005004153	tdp2b	96	52.878	ENSCJAG00000006074	TDP2	90	52.536	Callithrix_jacchus
ENSMZEG00005004153	tdp2b	93	54.924	ENSCAFG00000010428	TDP2	90	54.717	Canis_familiaris
ENSMZEG00005004153	tdp2b	93	54.717	ENSCAFG00020009994	TDP2	90	54.717	Canis_lupus_dingo
ENSMZEG00005004153	tdp2b	95	52.941	ENSCHIG00000015294	-	91	52.941	Capra_hircus
ENSMZEG00005004153	tdp2b	89	53.333	ENSTSYG00000037199	TDP2	85	52.273	Carlito_syrichta
ENSMZEG00005004153	tdp2b	93	53.409	ENSCPOG00000006390	TDP2	73	53.409	Cavia_porcellus
ENSMZEG00005004153	tdp2b	96	51.812	ENSCCAG00000022734	TDP2	90	51.812	Cebus_capucinus
ENSMZEG00005004153	tdp2b	96	51.087	ENSCATG00000022076	TDP2	90	51.087	Cercocebus_atys
ENSMZEG00005004153	tdp2b	94	52.256	ENSCLAG00000002072	TDP2	74	52.256	Chinchilla_lanigera
ENSMZEG00005004153	tdp2b	95	51.273	ENSCSAG00000007769	TDP2	76	51.273	Chlorocebus_sabaeus
ENSMZEG00005004153	tdp2b	89	54.941	ENSCPBG00000006551	TDP2	64	54.941	Chrysemys_picta_bellii
ENSMZEG00005004153	tdp2b	95	50.909	ENSCANG00000040122	TDP2	90	50.909	Colobus_angolensis_palliatus
ENSMZEG00005004153	tdp2b	87	55.645	ENSCGRG00001000384	Tdp2	66	55.645	Cricetulus_griseus_chok1gshd
ENSMZEG00005004153	tdp2b	87	55.645	ENSCGRG00000010250	Tdp2	70	55.645	Cricetulus_griseus_crigri
ENSMZEG00005004153	tdp2b	96	70.221	ENSCVAG00000003114	tdp2b	74	70.221	Cyprinodon_variegatus
ENSMZEG00005004153	tdp2b	87	51.613	ENSDARG00000069941	tdp2a	55	51.613	Danio_rerio
ENSMZEG00005004153	tdp2b	94	63.534	ENSDARG00000035954	tdp2b	69	63.534	Danio_rerio
ENSMZEG00005004153	tdp2b	89	54.331	ENSDNOG00000044082	TDP2	69	54.331	Dasypus_novemcinctus
ENSMZEG00005004153	tdp2b	93	53.409	ENSETEG00000019096	TDP2	94	53.409	Echinops_telfairi
ENSMZEG00005004153	tdp2b	90	45.703	ENSEBUG00000006535	tdp2a	59	45.703	Eptatretus_burgeri
ENSMZEG00005004153	tdp2b	91	51.923	ENSEASG00005007656	TDP2	71	51.923	Equus_asinus_asinus
ENSMZEG00005004153	tdp2b	94	51.128	ENSECAG00000014264	TDP2	73	51.128	Equus_caballus
ENSMZEG00005004153	tdp2b	96	50.534	ENSEEUG00000010776	TDP2	78	50.534	Erinaceus_europaeus
ENSMZEG00005004153	tdp2b	95	63.100	ENSELUG00000016449	tdp2b	71	63.100	Esox_lucius
ENSMZEG00005004153	tdp2b	96	47.810	ENSELUG00000009321	tdp2a	83	47.015	Esox_lucius
ENSMZEG00005004153	tdp2b	93	54.924	ENSFCAG00000025612	TDP2	72	54.924	Felis_catus
ENSMZEG00005004153	tdp2b	95	52.768	ENSFALG00000004710	TDP2	75	52.768	Ficedula_albicollis
ENSMZEG00005004153	tdp2b	94	53.358	ENSFDAG00000006512	TDP2	92	53.358	Fukomys_damarensis
ENSMZEG00005004153	tdp2b	90	61.660	ENSFHEG00000013560	-	87	61.660	Fundulus_heteroclitus
ENSMZEG00005004153	tdp2b	96	52.555	ENSGALG00000013637	TDP2	73	52.555	Gallus_gallus
ENSMZEG00005004153	tdp2b	89	55.336	ENSGAGG00000002853	TDP2	64	55.336	Gopherus_agassizii
ENSMZEG00005004153	tdp2b	91	53.008	ENSGGOG00000014237	TDP2	87	53.008	Gorilla_gorilla
ENSMZEG00005004153	tdp2b	74	89.100	ENSHBUG00000005421	-	97	83.190	Haplochromis_burtoni
ENSMZEG00005004153	tdp2b	96	79.783	ENSHBUG00000002714	tdp2b	77	79.783	Haplochromis_burtoni
ENSMZEG00005004153	tdp2b	95	52.941	ENSHGLG00000008655	TDP2	76	52.941	Heterocephalus_glaber_female
ENSMZEG00005004153	tdp2b	95	52.941	ENSHGLG00100019087	TDP2	76	52.941	Heterocephalus_glaber_male
ENSMZEG00005004153	tdp2b	92	61.597	ENSIPUG00000013691	tdp2b	70	61.597	Ictalurus_punctatus
ENSMZEG00005004153	tdp2b	86	53.061	ENSJJAG00000021685	Tdp2	70	53.061	Jaculus_jaculus
ENSMZEG00005004153	tdp2b	92	62.069	ENSKMAG00000015485	-	84	62.069	Kryptolebias_marmoratus
ENSMZEG00005004153	tdp2b	89	53.150	ENSLACG00000008852	TDP2	69	53.150	Latimeria_chalumnae
ENSMZEG00005004153	tdp2b	96	55.435	ENSLOCG00000005817	tdp2b	98	55.435	Lepisosteus_oculatus
ENSMZEG00005004153	tdp2b	95	53.333	ENSLAFG00000002567	TDP2	76	53.333	Loxodonta_africana
ENSMZEG00005004153	tdp2b	96	51.087	ENSMFAG00000045296	TDP2	90	51.087	Macaca_fascicularis
ENSMZEG00005004153	tdp2b	95	51.273	ENSMMUG00000009803	TDP2	76	51.273	Macaca_mulatta
ENSMZEG00005004153	tdp2b	96	51.087	ENSMNEG00000038003	TDP2	90	51.087	Macaca_nemestrina
ENSMZEG00005004153	tdp2b	96	51.079	ENSMLEG00000028883	TDP2	90	51.273	Mandrillus_leucophaeus
ENSMZEG00005004153	tdp2b	97	68.978	ENSMAMG00000013654	tdp2b	76	68.978	Mastacembelus_armatus
ENSMZEG00005004153	tdp2b	95	81.716	ENSMZEG00005004126	tdp2b	92	81.716	Maylandia_zebra
ENSMZEG00005004153	tdp2b	96	76.895	ENSMZEG00005003950	tdp2b	77	76.895	Maylandia_zebra
ENSMZEG00005004153	tdp2b	89	80.478	ENSMZEG00005004055	tdp2b	84	80.478	Maylandia_zebra
ENSMZEG00005004153	tdp2b	94	76.604	ENSMZEG00005004103	tdp2b	90	76.604	Maylandia_zebra
ENSMZEG00005004153	tdp2b	83	79.237	ENSMZEG00005003980	-	77	79.237	Maylandia_zebra
ENSMZEG00005004153	tdp2b	97	88.603	ENSMZEG00005004077	tdp2b	93	88.603	Maylandia_zebra
ENSMZEG00005004153	tdp2b	96	52.920	ENSMGAG00000008014	TDP2	73	52.920	Meleagris_gallopavo
ENSMZEG00005004153	tdp2b	87	54.839	ENSMAUG00000014451	Tdp2	66	54.839	Mesocricetus_auratus
ENSMZEG00005004153	tdp2b	99	51.064	ENSMICG00000000039	TDP2	94	51.064	Microcebus_murinus
ENSMZEG00005004153	tdp2b	93	55.133	ENSMOCG00000002823	Tdp2	69	55.133	Microtus_ochrogaster
ENSMZEG00005004153	tdp2b	85	54.132	ENSMODG00000011653	TDP2	66	57.870	Monodelphis_domestica
ENSMZEG00005004153	tdp2b	88	64.372	ENSMALG00000005368	-	84	64.372	Monopterus_albus
ENSMZEG00005004153	tdp2b	99	53.004	MGP_CAROLIEiJ_G0018354	Tdp2	75	53.004	Mus_caroli
ENSMZEG00005004153	tdp2b	94	54.104	ENSMUSG00000035958	Tdp2	69	54.104	Mus_musculus
ENSMZEG00005004153	tdp2b	87	55.061	MGP_PahariEiJ_G0019417	Tdp2	66	55.061	Mus_pahari
ENSMZEG00005004153	tdp2b	94	54.104	MGP_SPRETEiJ_G0019220	Tdp2	69	54.104	Mus_spretus
ENSMZEG00005004153	tdp2b	93	55.682	ENSMPUG00000004516	TDP2	73	55.682	Mustela_putorius_furo
ENSMZEG00005004153	tdp2b	93	51.128	ENSMLUG00000013506	TDP2	73	51.128	Myotis_lucifugus
ENSMZEG00005004153	tdp2b	87	54.251	ENSNGAG00000001375	Tdp2	66	54.251	Nannospalax_galili
ENSMZEG00005004153	tdp2b	91	53.008	ENSNLEG00000002447	TDP2	84	53.008	Nomascus_leucogenys
ENSMZEG00005004153	tdp2b	93	53.409	ENSOPRG00000016299	TDP2	76	53.409	Ochotona_princeps
ENSMZEG00005004153	tdp2b	97	51.786	ENSODEG00000014018	TDP2	95	51.786	Octodon_degus
ENSMZEG00005004153	tdp2b	94	51.504	ENSOCUG00000013773	TDP2	74	51.504	Oryctolagus_cuniculus
ENSMZEG00005004153	tdp2b	95	58.889	ENSORLG00000001661	-	99	58.889	Oryzias_latipes
ENSMZEG00005004153	tdp2b	95	58.889	ENSORLG00020004634	-	99	58.889	Oryzias_latipes_hni
ENSMZEG00005004153	tdp2b	95	52.045	ENSORLG00015008190	-	99	52.045	Oryzias_latipes_hsok
ENSMZEG00005004153	tdp2b	91	59.690	ENSOMEG00000015899	-	93	59.600	Oryzias_melastigma
ENSMZEG00005004153	tdp2b	95	52.222	ENSOGAG00000025303	TDP2	72	52.222	Otolemur_garnettii
ENSMZEG00005004153	tdp2b	91	53.008	ENSPPAG00000029023	TDP2	87	53.008	Pan_paniscus
ENSMZEG00005004153	tdp2b	93	53.409	ENSPPRG00000015398	TDP2	72	53.409	Panthera_pardus
ENSMZEG00005004153	tdp2b	99	51.389	ENSPTIG00000018574	TDP2	98	51.389	Panthera_tigris_altaica
ENSMZEG00005004153	tdp2b	91	53.008	ENSPTRG00000017778	TDP2	87	53.008	Pan_troglodytes
ENSMZEG00005004153	tdp2b	91	53.101	ENSPANG00000017590	TDP2	90	51.449	Papio_anubis
ENSMZEG00005004153	tdp2b	97	62.681	ENSPKIG00000006483	tdp2b	74	62.681	Paramormyrops_kingsleyae
ENSMZEG00005004153	tdp2b	95	53.333	ENSPSIG00000004948	TDP2	92	53.333	Pelodiscus_sinensis
ENSMZEG00005004153	tdp2b	92	54.789	ENSPEMG00000001788	Tdp2	69	54.789	Peromyscus_maniculatus_bairdii
ENSMZEG00005004153	tdp2b	89	43.657	ENSPMAG00000001570	tdp2b	97	43.657	Petromyzon_marinus
ENSMZEG00005004153	tdp2b	98	51.957	ENSPCIG00000007316	TDP2	73	52.313	Phascolarctos_cinereus
ENSMZEG00005004153	tdp2b	94	54.682	ENSPFOG00000017990	-	96	54.682	Poecilia_formosa
ENSMZEG00005004153	tdp2b	93	55.133	ENSPLAG00000019439	-	83	55.133	Poecilia_latipinna
ENSMZEG00005004153	tdp2b	96	54.212	ENSPMEG00000010824	-	92	54.212	Poecilia_mexicana
ENSMZEG00005004153	tdp2b	91	52.632	ENSPPYG00000016282	TDP2	67	52.632	Pongo_abelii
ENSMZEG00005004153	tdp2b	98	51.064	ENSPCOG00000021415	TDP2	98	51.064	Propithecus_coquereli
ENSMZEG00005004153	tdp2b	64	78.771	ENSPNYG00000001944	-	72	79.532	Pundamilia_nyererei
ENSMZEG00005004153	tdp2b	99	91.525	ENSPNYG00000011504	tdp2b	96	91.525	Pundamilia_nyererei
ENSMZEG00005004153	tdp2b	96	82.671	ENSPNYG00000011532	tdp2b	77	82.671	Pundamilia_nyererei
ENSMZEG00005004153	tdp2b	88	56.627	ENSPNAG00000022162	tdp2a	63	56.627	Pygocentrus_nattereri
ENSMZEG00005004153	tdp2b	87	55.061	ENSRNOG00000018246	Tdp2	66	55.061	Rattus_norvegicus
ENSMZEG00005004153	tdp2b	95	50.909	ENSRBIG00000037119	TDP2	90	50.909	Rhinopithecus_bieti
ENSMZEG00005004153	tdp2b	95	51.273	ENSRROG00000005025	TDP2	90	51.273	Rhinopithecus_roxellana
ENSMZEG00005004153	tdp2b	96	51.812	ENSSBOG00000028734	TDP2	90	51.812	Saimiri_boliviensis_boliviensis
ENSMZEG00005004153	tdp2b	89	56.522	ENSSHAG00000002506	TDP2	67	56.522	Sarcophilus_harrisii
ENSMZEG00005004153	tdp2b	90	54.000	ENSSFOG00015011322	-	70	52.590	Scleropages_formosus
ENSMZEG00005004153	tdp2b	94	51.866	ENSSARG00000013547	TDP2	95	51.866	Sorex_araneus
ENSMZEG00005004153	tdp2b	94	50.186	ENSSPUG00000008288	TDP2	73	50.186	Sphenodon_punctatus
ENSMZEG00005004153	tdp2b	91	53.462	ENSSSCG00000001092	TDP2	71	53.462	Sus_scrofa
ENSMZEG00005004153	tdp2b	90	53.725	ENSTGUG00000009035	TDP2	97	53.725	Taeniopygia_guttata
ENSMZEG00005004153	tdp2b	95	57.621	ENSTRUG00000012218	-	94	57.621	Takifugu_rubripes
ENSMZEG00005004153	tdp2b	93	70.722	ENSTRUG00000014347	tdp2b	73	70.722	Takifugu_rubripes
ENSMZEG00005004153	tdp2b	93	71.103	ENSTNIG00000017792	tdp2b	73	71.103	Tetraodon_nigroviridis
ENSMZEG00005004153	tdp2b	91	62.069	ENSTNIG00000010260	TDP2	99	62.069	Tetraodon_nigroviridis
ENSMZEG00005004153	tdp2b	89	55.906	ENSTTRG00000016376	TDP2	72	54.545	Tursiops_truncatus
ENSMZEG00005004153	tdp2b	93	54.545	ENSUAMG00000025939	TDP2	76	54.545	Ursus_americanus
ENSMZEG00005004153	tdp2b	93	54.340	ENSUMAG00000020111	TDP2	88	54.340	Ursus_maritimus
ENSMZEG00005004153	tdp2b	94	52.985	ENSXETG00000014826	tdp2	70	52.985	Xenopus_tropicalis
ENSMZEG00005004153	tdp2b	88	58.000	ENSXCOG00000010778	-	69	58.000	Xiphophorus_couchianus
ENSMZEG00005004153	tdp2b	88	58.400	ENSXMAG00000022252	-	72	58.400	Xiphophorus_maculatus