EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004205 (Gene tree)
Gene ID: 101484067
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 1011 bases
Position: chrLG8:16995676-16996686
Accession: 101484067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005430	RRM_1	PF00076.22	9.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005660	-	678	XM_004556648	ENSMZEP00005005430	225 (aa)	XP_004556705	UPI000329D7FB

Gene Model

Click here to download ENSMZEG00005004205's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG
mze05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004205	srsf2a	61	78.102	ENSG00000161547	SRSF2	85	94.690	Homo_sapiens
ENSMZEG00005004205	srsf2a	61	68.841	ENSAMEG00000013624	-	50	90.909	Ailuropoda_melanoleuca
ENSMZEG00005004205	srsf2a	100	94.690	ENSAOCG00000021878	srsf2a	52	98.246	Amphiprion_ocellaris
ENSMZEG00005004205	srsf2a	100	94.690	ENSAPEG00000023494	srsf2a	52	98.246	Amphiprion_percula
ENSMZEG00005004205	srsf2a	50	94.690	ENSACAG00000008553	-	51	94.690	Anolis_carolinensis
ENSMZEG00005004205	srsf2a	100	100.000	ENSACLG00000027016	srsf2a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005004205	srsf2a	100	62.832	ENSCHOG00000014019	-	53	92.593	Choloepus_hoffmanni
ENSMZEG00005004205	srsf2a	52	95.763	ENSDARG00000057484	srsf2a	100	95.763	Danio_rerio
ENSMZEG00005004205	srsf2a	96	45.370	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSMZEG00005004205	srsf2a	68	58.553	ENSEBUG00000008729	-	53	74.074	Eptatretus_burgeri
ENSMZEG00005004205	srsf2a	99	72.321	ENSGAFG00000005791	srsf2a	56	98.246	Gambusia_affinis
ENSMZEG00005004205	srsf2a	100	100.000	ENSHBUG00000013254	srsf2a	100	100.000	Haplochromis_burtoni
ENSMZEG00005004205	srsf2a	50	93.860	ENSLOCG00000011252	srsf2a	53	93.860	Lepisosteus_oculatus
ENSMZEG00005004205	srsf2a	100	95.652	ENSMAMG00000002803	srsf2a	100	95.652	Mastacembelus_armatus
ENSMZEG00005004205	srsf2a	82	60.870	ENSMMOG00000020132	srsf2b	53	93.694	Mola_mola
ENSMZEG00005004205	srsf2a	50	97.368	ENSMMOG00000020751	srsf2a	53	97.368	Mola_mola
ENSMZEG00005004205	srsf2a	50	98.246	ENSMALG00000012956	srsf2a	50	98.246	Monopterus_albus
ENSMZEG00005004205	srsf2a	52	58.475	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSMZEG00005004205	srsf2a	50	92.982	ENSPKIG00000023128	-	50	92.982	Paramormyrops_kingsleyae
ENSMZEG00005004205	srsf2a	100	100.000	ENSPNYG00000001148	srsf2a	100	100.000	Pundamilia_nyererei
ENSMZEG00005004205	srsf2a	60	84.559	ENSSFOG00015003975	-	50	96.396	Scleropages_formosus
ENSMZEG00005004205	srsf2a	55	93.496	ENSSDUG00000013865	srsf2a	50	99.099	Seriola_dumerili
ENSMZEG00005004205	srsf2a	55	93.496	ENSSLDG00000017717	srsf2a	50	99.099	Seriola_lalandi_dorsalis
ENSMZEG00005004205	srsf2a	64	64.384	ENSSSCG00000012212	-	56	71.171	Sus_scrofa
ENSMZEG00005004205	srsf2a	50	93.103	ENSTGUG00000007799	-	52	93.103	Taeniopygia_guttata
ENSMZEG00005004205	srsf2a	53	87.705	ENSTRUG00000024363	srsf2b	50	89.381	Takifugu_rubripes
ENSMZEG00005004205	srsf2a	50	97.368	ENSTRUG00000018104	srsf2a	50	97.368	Takifugu_rubripes
ENSMZEG00005004205	srsf2a	50	97.368	ENSTNIG00000001280	srsf2a	51	97.368	Tetraodon_nigroviridis
ENSMZEG00005004205	srsf2a	50	94.737	ENSXETG00000025271	srsf2	52	94.737	Xenopus_tropicalis
ENSMZEG00005004205	srsf2a	50	98.246	ENSXCOG00000005917	srsf2a	52	98.246	Xiphophorus_couchianus