EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004349 (Gene tree)
Gene ID: -
Gene Symbol: RRS1
Alias: KIAA0112
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 5282 bases
Position: chrAGTA05001134.1:2989-8270
Accession: 17083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005621	RRS1	PF04939.12	6.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005005863	RRS1-201	1068	-	ENSMZEP00005005621	355 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005004349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004349	RRS1	88	66.667	ENSG00000179041	RRS1	82	67.442	Homo_sapiens
ENSMZEG00005004349	RRS1	88	81.847	ENSATEG00000011743	rrs1	85	82.492	Anabas_testudineus
ENSMZEG00005004349	RRS1	92	66.261	ENSANAG00000018116	RRS1	82	68.106	Aotus_nancymaae
ENSMZEG00005004349	RRS1	87	72.026	ENSAMXG00000037893	rrs1	77	73.154	Astyanax_mexicanus
ENSMZEG00005004349	RRS1	92	64.742	ENSBTAG00000016716	RRS1	82	66.445	Bos_taurus
ENSMZEG00005004349	RRS1	73	46.097	WBGene00007617	rrbs-1	79	46.097	Caenorhabditis_elegans
ENSMZEG00005004349	RRS1	92	65.653	ENSCJAG00000022034	RRS1	82	67.442	Callithrix_jacchus
ENSMZEG00005004349	RRS1	85	66.775	ENSCAFG00000007313	RRS1	82	67.110	Canis_familiaris
ENSMZEG00005004349	RRS1	85	66.775	ENSCAFG00020016049	-	82	67.110	Canis_lupus_dingo
ENSMZEG00005004349	RRS1	85	66.775	ENSCAFG00020020365	-	82	67.110	Canis_lupus_dingo
ENSMZEG00005004349	RRS1	88	66.038	ENSCHIG00000009141	RRS1	82	66.777	Capra_hircus
ENSMZEG00005004349	RRS1	91	66.258	ENSCPOG00000000647	RRS1	84	68.106	Cavia_porcellus
ENSMZEG00005004349	RRS1	92	65.350	ENSCCAG00000032186	RRS1	82	67.442	Cebus_capucinus
ENSMZEG00005004349	RRS1	88	66.981	ENSCATG00000016944	RRS1	82	67.774	Cercocebus_atys
ENSMZEG00005004349	RRS1	88	66.667	ENSCSAG00000018552	RRS1	82	67.442	Chlorocebus_sabaeus
ENSMZEG00005004349	RRS1	88	66.667	ENSCHOG00000002455	RRS1	82	67.442	Choloepus_hoffmanni
ENSMZEG00005004349	RRS1	88	57.585	ENSCPBG00000021374	RRS1	86	59.406	Chrysemys_picta_bellii
ENSMZEG00005004349	RRS1	87	54.167	ENSCING00000002177	-	89	56.597	Ciona_intestinalis
ENSMZEG00005004349	RRS1	87	54.167	ENSCSAVG00000011819	-	89	55.556	Ciona_savignyi
ENSMZEG00005004349	RRS1	92	65.957	ENSCANG00000012718	RRS1	82	67.774	Colobus_angolensis_palliatus
ENSMZEG00005004349	RRS1	96	63.584	ENSCGRG00001015575	-	86	67.000	Cricetulus_griseus_chok1gshd
ENSMZEG00005004349	RRS1	92	65.152	ENSCGRG00001002391	-	82	66.777	Cricetulus_griseus_chok1gshd
ENSMZEG00005004349	RRS1	85	67.327	ENSCSEG00000014750	rrs1	81	67.114	Cynoglossus_semilaevis
ENSMZEG00005004349	RRS1	85	68.750	ENSCVAG00000017878	rrs1	84	69.128	Cyprinodon_variegatus
ENSMZEG00005004349	RRS1	84	76.254	ENSDARG00000003941	rrs1	86	76.431	Danio_rerio
ENSMZEG00005004349	RRS1	89	64.890	ENSDNOG00000017900	RRS1	81	66.445	Dasypus_novemcinctus
ENSMZEG00005004349	RRS1	61	67.273	ENSDORG00000026331	Rrs1	77	68.473	Dipodomys_ordii
ENSMZEG00005004349	RRS1	91	46.707	FBgn0052409	CG32409	83	48.986	Drosophila_melanogaster
ENSMZEG00005004349	RRS1	57	67.488	ENSETEG00000000935	-	55	67.488	Echinops_telfairi
ENSMZEG00005004349	RRS1	83	56.463	ENSEBUG00000013506	rrs1	96	56.338	Eptatretus_burgeri
ENSMZEG00005004349	RRS1	88	66.352	ENSEASG00005001691	RRS1	82	67.110	Equus_asinus_asinus
ENSMZEG00005004349	RRS1	92	63.855	ENSECAG00000004492	RRS1	89	67.110	Equus_caballus
ENSMZEG00005004349	RRS1	88	65.723	ENSEEUG00000013719	RRS1	82	66.667	Erinaceus_europaeus
ENSMZEG00005004349	RRS1	92	65.046	ENSFCAG00000014332	RRS1	82	66.667	Felis_catus
ENSMZEG00005004349	RRS1	82	58.609	ENSGALG00000030890	RRS1	85	58.632	Gallus_gallus
ENSMZEG00005004349	RRS1	85	77.076	ENSGACG00000002969	rrs1	84	77.181	Gasterosteus_aculeatus
ENSMZEG00005004349	RRS1	88	58.385	ENSGAGG00000023718	RRS1	84	60.396	Gopherus_agassizii
ENSMZEG00005004349	RRS1	88	67.296	ENSGGOG00000026663	RRS1	82	68.106	Gorilla_gorilla
ENSMZEG00005004349	RRS1	92	65.046	ENSHGLG00000021423	RRS1	82	67.110	Heterocephalus_glaber_female
ENSMZEG00005004349	RRS1	92	65.046	ENSHGLG00100020640	RRS1	82	67.110	Heterocephalus_glaber_male
ENSMZEG00005004349	RRS1	94	71.176	ENSHCOG00000015358	rrs1	83	74.747	Hippocampus_comes
ENSMZEG00005004349	RRS1	83	72.391	ENSIPUG00000014412	rrs1	85	72.391	Ictalurus_punctatus
ENSMZEG00005004349	RRS1	94	60.882	ENSSTOG00000026310	RRS1	82	68.106	Ictidomys_tridecemlineatus
ENSMZEG00005004349	RRS1	78	59.140	ENSJJAG00000020395	-	81	59.140	Jaculus_jaculus
ENSMZEG00005004349	RRS1	86	66.129	ENSJJAG00000011507	-	81	66.667	Jaculus_jaculus
ENSMZEG00005004349	RRS1	85	80.858	ENSKMAG00000008238	rrs1	88	80.537	Kryptolebias_marmoratus
ENSMZEG00005004349	RRS1	87	72.168	ENSLACG00000004058	RRS1	90	73.401	Latimeria_chalumnae
ENSMZEG00005004349	RRS1	88	74.359	ENSLOCG00000017812	rrs1	87	75.758	Lepisosteus_oculatus
ENSMZEG00005004349	RRS1	88	66.667	ENSLAFG00000015405	RRS1	81	67.442	Loxodonta_africana
ENSMZEG00005004349	RRS1	94	63.352	ENSMFAG00000042747	RRS1	82	67.774	Macaca_fascicularis
ENSMZEG00005004349	RRS1	94	63.352	ENSMMUG00000000886	RRS1	82	67.774	Macaca_mulatta
ENSMZEG00005004349	RRS1	94	63.352	ENSMNEG00000011696	RRS1	82	67.774	Macaca_nemestrina
ENSMZEG00005004349	RRS1	88	66.981	ENSMLEG00000004794	RRS1	82	67.774	Mandrillus_leucophaeus
ENSMZEG00005004349	RRS1	92	66.565	ENSMAUG00000005392	Rrs1	82	68.439	Mesocricetus_auratus
ENSMZEG00005004349	RRS1	96	62.857	ENSMOCG00000015862	Rrs1	77	66.777	Microtus_ochrogaster
ENSMZEG00005004349	RRS1	91	63.720	ENSMODG00000024952	RRS1	82	65.232	Monodelphis_domestica
ENSMZEG00005004349	RRS1	92	65.957	MGP_CAROLIEiJ_G0013936	Rrs1	83	67.774	Mus_caroli
ENSMZEG00005004349	RRS1	92	65.957	ENSMUSG00000061024	Rrs1	82	67.774	Mus_musculus
ENSMZEG00005004349	RRS1	92	65.046	MGP_PahariEiJ_G0023883	Rrs1	82	67.110	Mus_pahari
ENSMZEG00005004349	RRS1	92	65.957	MGP_SPRETEiJ_G0014739	Rrs1	82	67.774	Mus_spretus
ENSMZEG00005004349	RRS1	94	64.431	ENSMPUG00000018626	RRS1	81	67.110	Mustela_putorius_furo
ENSMZEG00005004349	RRS1	92	63.609	ENSNGAG00000012904	Rrs1	82	65.552	Nannospalax_galili
ENSMZEG00005004349	RRS1	70	65.399	ENSNLEG00000027730	RRS1	72	70.455	Nomascus_leucogenys
ENSMZEG00005004349	RRS1	91	98.457	ENSONIG00000014187	rrs1	94	98.457	Oreochromis_niloticus
ENSMZEG00005004349	RRS1	90	60.123	ENSOANG00000012348	RRS1	81	60.667	Ornithorhynchus_anatinus
ENSMZEG00005004349	RRS1	92	66.565	ENSOCUG00000013490	RRS1	81	68.439	Oryctolagus_cuniculus
ENSMZEG00005004349	RRS1	89	69.937	ENSOMEG00000008525	rrs1	85	71.141	Oryzias_melastigma
ENSMZEG00005004349	RRS1	92	64.742	ENSOGAG00000001085	RRS1	82	66.445	Otolemur_garnettii
ENSMZEG00005004349	RRS1	88	61.830	ENSOARG00000017417	RRS1	80	62.458	Ovis_aries
ENSMZEG00005004349	RRS1	88	66.981	ENSPPAG00000024378	RRS1	82	67.774	Pan_paniscus
ENSMZEG00005004349	RRS1	92	65.046	ENSPPRG00000021408	RRS1	82	66.667	Panthera_pardus
ENSMZEG00005004349	RRS1	88	66.667	ENSPTRG00000030988	RRS1	82	67.442	Pan_troglodytes
ENSMZEG00005004349	RRS1	94	48.851	ENSPANG00000035974	RRS1	78	51.515	Papio_anubis
ENSMZEG00005004349	RRS1	84	69.463	ENSPKIG00000007953	rrs1	86	69.831	Paramormyrops_kingsleyae
ENSMZEG00005004349	RRS1	92	65.455	ENSPEMG00000014427	Rrs1	82	67.110	Peromyscus_maniculatus_bairdii
ENSMZEG00005004349	RRS1	83	60.535	ENSPMAG00000006513	rrs1	78	60.339	Petromyzon_marinus
ENSMZEG00005004349	RRS1	86	64.194	ENSPCIG00000026695	RRS1	84	63.907	Phascolarctos_cinereus
ENSMZEG00005004349	RRS1	91	82.769	ENSPFOG00000020722	rrs1	92	85.235	Poecilia_formosa
ENSMZEG00005004349	RRS1	85	73.179	ENSPREG00000019960	rrs1	82	73.154	Poecilia_reticulata
ENSMZEG00005004349	RRS1	83	68.456	ENSPPYG00000018637	RRS1	99	68.456	Pongo_abelii
ENSMZEG00005004349	RRS1	92	65.046	ENSPCAG00000009115	RRS1	82	66.777	Procavia_capensis
ENSMZEG00005004349	RRS1	82	74.570	ENSPNAG00000021707	rrs1	85	74.161	Pygocentrus_nattereri
ENSMZEG00005004349	RRS1	85	67.752	ENSRNOG00000007240	Rrs1	82	68.106	Rattus_norvegicus
ENSMZEG00005004349	RRS1	88	66.667	ENSRBIG00000009132	RRS1	82	67.442	Rhinopithecus_bieti
ENSMZEG00005004349	RRS1	88	66.667	ENSRROG00000013472	RRS1	82	67.442	Rhinopithecus_roxellana
ENSMZEG00005004349	RRS1	85	67.101	ENSSBOG00000011006	-	84	67.442	Saimiri_boliviensis_boliviensis
ENSMZEG00005004349	RRS1	84	67.657	ENSSBOG00000012639	-	84	67.442	Saimiri_boliviensis_boliviensis
ENSMZEG00005004349	RRS1	82	57.877	ENSSFOG00015015772	rrs1	80	58.131	Scleropages_formosus
ENSMZEG00005004349	RRS1	83	81.081	ENSSMAG00000015226	rrs1	80	81.443	Scophthalmus_maximus
ENSMZEG00005004349	RRS1	70	61.789	ENSSARG00000006976	RRS1	63	61.607	Sorex_araneus
ENSMZEG00005004349	RRS1	93	62.356	ENSSSCG00000006214	RRS1	82	66.777	Sus_scrofa
ENSMZEG00005004349	RRS1	86	76.623	ENSTRUG00000008796	rrs1	87	78.671	Takifugu_rubripes
ENSMZEG00005004349	RRS1	84	81.208	ENSTNIG00000004026	rrs1	88	81.208	Tetraodon_nigroviridis
ENSMZEG00005004349	RRS1	88	66.667	ENSTBEG00000014752	RRS1	82	67.442	Tupaia_belangeri
ENSMZEG00005004349	RRS1	94	64.620	ENSUAMG00000008502	RRS1	82	67.110	Ursus_americanus
ENSMZEG00005004349	RRS1	85	66.775	ENSVVUG00000018452	RRS1	82	67.110	Vulpes_vulpes
ENSMZEG00005004349	RRS1	84	84.564	ENSXCOG00000009809	rrs1	84	84.564	Xiphophorus_couchianus