EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004564 (Gene tree)
Gene ID: 101475278
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 8721 bases
Position: chrLG4:30387769-30396489
Accession: 101475278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005942	IBN_N	PF03810.19	9.6e-11	1	1
ENSMZEP00005005969	IBN_N	PF03810.19	9.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006226	-	2634	-	ENSMZEP00005005969	877 (aa)	-	-
ENSMZET00005006199	-	2631	XM_004556524	ENSMZEP00005005942	876 (aa)	XP_004556581	UPI0003299A0B

Gene Model

Click here to download ENSMZEG00005004564's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004564	kpnb1	100	92.808	ENSG00000108424	KPNB1	99	94.521	Homo_sapiens
ENSMZEG00005004564	kpnb1	100	99.087	ENSAPOG00000020572	kpnb1	100	99.087	Acanthochromis_polyacanthus
ENSMZEG00005004564	kpnb1	96	93.009	ENSAMEG00000004613	KPNB1	100	93.009	Ailuropoda_melanoleuca
ENSMZEG00005004564	kpnb1	98	99.650	ENSACIG00000023130	kpnb1	100	99.650	Amphilophus_citrinellus
ENSMZEG00005004564	kpnb1	100	99.087	ENSAOCG00000007048	kpnb1	100	99.087	Amphiprion_ocellaris
ENSMZEG00005004564	kpnb1	100	99.087	ENSAPEG00000008270	kpnb1	100	99.087	Amphiprion_percula
ENSMZEG00005004564	kpnb1	100	98.402	ENSATEG00000015139	kpnb1	100	98.402	Anabas_testudineus
ENSMZEG00005004564	kpnb1	96	92.426	ENSAPLG00000010177	KPNB1	96	92.426	Anas_platyrhynchos
ENSMZEG00005004564	kpnb1	100	93.151	ENSACAG00000007097	KPNB1	100	93.151	Anolis_carolinensis
ENSMZEG00005004564	kpnb1	100	90.068	ENSANAG00000024932	-	99	90.068	Aotus_nancymaae
ENSMZEG00005004564	kpnb1	100	100.000	ENSACLG00000015070	kpnb1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005004564	kpnb1	100	97.374	ENSAMXG00000041903	kpnb1	100	97.374	Astyanax_mexicanus
ENSMZEG00005004564	kpnb1	100	93.151	ENSBTAG00000006586	KPNB1	100	93.151	Bos_taurus
ENSMZEG00005004564	kpnb1	99	47.668	WBGene00002075	imb-1	98	47.668	Caenorhabditis_elegans
ENSMZEG00005004564	kpnb1	100	92.922	ENSCJAG00000007834	KPNB1	100	92.922	Callithrix_jacchus
ENSMZEG00005004564	kpnb1	100	93.151	ENSCAFG00000016678	KPNB1	100	93.151	Canis_familiaris
ENSMZEG00005004564	kpnb1	100	93.151	ENSCAFG00020023205	KPNB1	100	93.151	Canis_lupus_dingo
ENSMZEG00005004564	kpnb1	100	93.151	ENSCHIG00000014896	KPNB1	100	93.151	Capra_hircus
ENSMZEG00005004564	kpnb1	100	91.210	ENSTSYG00000014472	KPNB1	98	92.908	Carlito_syrichta
ENSMZEG00005004564	kpnb1	96	93.001	ENSCAPG00000014185	KPNB1	100	93.001	Cavia_aperea
ENSMZEG00005004564	kpnb1	100	92.922	ENSCPOG00000006566	KPNB1	100	92.922	Cavia_porcellus
ENSMZEG00005004564	kpnb1	100	86.560	ENSCCAG00000029263	-	99	86.560	Cebus_capucinus
ENSMZEG00005004564	kpnb1	100	70.865	ENSCCAG00000018551	-	98	72.388	Cebus_capucinus
ENSMZEG00005004564	kpnb1	100	92.808	ENSCATG00000037124	KPNB1	100	92.808	Cercocebus_atys
ENSMZEG00005004564	kpnb1	100	92.808	ENSCLAG00000017091	KPNB1	100	92.808	Chinchilla_lanigera
ENSMZEG00005004564	kpnb1	100	92.808	ENSCSAG00000002605	KPNB1	100	92.808	Chlorocebus_sabaeus
ENSMZEG00005004564	kpnb1	73	84.906	ENSCHOG00000010604	KPNB1	73	84.906	Choloepus_hoffmanni
ENSMZEG00005004564	kpnb1	99	93.395	ENSCPBG00000027423	KPNB1	95	93.318	Chrysemys_picta_bellii
ENSMZEG00005004564	kpnb1	99	64.994	ENSCING00000004639	-	99	64.994	Ciona_intestinalis
ENSMZEG00005004564	kpnb1	100	62.373	ENSCSAVG00000008624	-	100	62.373	Ciona_savignyi
ENSMZEG00005004564	kpnb1	96	93.722	ENSCANG00000013489	KPNB1	100	93.722	Colobus_angolensis_palliatus
ENSMZEG00005004564	kpnb1	100	93.037	ENSCGRG00001016042	Kpnb1	100	93.037	Cricetulus_griseus_chok1gshd
ENSMZEG00005004564	kpnb1	96	93.128	ENSCGRG00000013910	Kpnb1	100	93.120	Cricetulus_griseus_crigri
ENSMZEG00005004564	kpnb1	97	95.188	ENSCSEG00000007991	kpnb1	100	95.188	Cynoglossus_semilaevis
ENSMZEG00005004564	kpnb1	100	96.804	ENSDARG00000104889	kpnb1	100	96.804	Danio_rerio
ENSMZEG00005004564	kpnb1	99	62.785	FBgn0262743	Fs(2)Ket	99	62.785	Drosophila_melanogaster
ENSMZEG00005004564	kpnb1	99	80.664	ENSEBUG00000013869	kpnb1	99	80.664	Eptatretus_burgeri
ENSMZEG00005004564	kpnb1	100	93.151	ENSEASG00005000805	KPNB1	100	93.151	Equus_asinus_asinus
ENSMZEG00005004564	kpnb1	100	93.151	ENSECAG00000014560	KPNB1	100	93.151	Equus_caballus
ENSMZEG00005004564	kpnb1	85	92.965	ENSEEUG00000005046	KPNB1	88	92.965	Erinaceus_europaeus
ENSMZEG00005004564	kpnb1	100	97.945	ENSELUG00000015847	kpnb1	100	97.945	Esox_lucius
ENSMZEG00005004564	kpnb1	100	93.151	ENSFCAG00000023994	KPNB1	100	93.151	Felis_catus
ENSMZEG00005004564	kpnb1	96	93.238	ENSFDAG00000019923	KPNB1	100	93.238	Fukomys_damarensis
ENSMZEG00005004564	kpnb1	100	97.945	ENSFHEG00000020199	kpnb1	100	97.945	Fundulus_heteroclitus
ENSMZEG00005004564	kpnb1	100	92.694	ENSGMOG00000011607	kpnb1	99	92.694	Gadus_morhua
ENSMZEG00005004564	kpnb1	100	92.808	ENSGALG00000036962	KPNB1	100	92.808	Gallus_gallus
ENSMZEG00005004564	kpnb1	100	97.831	ENSGAFG00000000783	kpnb1	100	97.831	Gambusia_affinis
ENSMZEG00005004564	kpnb1	100	93.785	ENSGACG00000014765	kpnb1	100	93.785	Gasterosteus_aculeatus
ENSMZEG00005004564	kpnb1	96	92.866	ENSGAGG00000023737	KPNB1	92	92.866	Gopherus_agassizii
ENSMZEG00005004564	kpnb1	100	92.808	ENSGGOG00000008089	KPNB1	100	92.808	Gorilla_gorilla
ENSMZEG00005004564	kpnb1	100	100.000	ENSHBUG00000016826	kpnb1	100	100.000	Haplochromis_burtoni
ENSMZEG00005004564	kpnb1	100	93.151	ENSHGLG00000014138	KPNB1	100	93.151	Heterocephalus_glaber_female
ENSMZEG00005004564	kpnb1	96	93.246	ENSHGLG00100006572	KPNB1	100	93.238	Heterocephalus_glaber_male
ENSMZEG00005004564	kpnb1	100	95.091	ENSHCOG00000002084	kpnb1	100	95.091	Hippocampus_comes
ENSMZEG00005004564	kpnb1	99	92.708	ENSIPUG00000012402	kpnb1	95	92.708	Ictalurus_punctatus
ENSMZEG00005004564	kpnb1	100	93.151	ENSSTOG00000007896	KPNB1	100	93.151	Ictidomys_tridecemlineatus
ENSMZEG00005004564	kpnb1	100	93.037	ENSJJAG00000010909	Kpnb1	100	93.037	Jaculus_jaculus
ENSMZEG00005004564	kpnb1	100	97.603	ENSKMAG00000001547	kpnb1	100	97.603	Kryptolebias_marmoratus
ENSMZEG00005004564	kpnb1	99	98.270	ENSLBEG00000025794	kpnb1	99	96.374	Labrus_bergylta
ENSMZEG00005004564	kpnb1	88	92.617	ENSLACG00000017620	KPNB1	99	92.617	Latimeria_chalumnae
ENSMZEG00005004564	kpnb1	100	97.603	ENSLOCG00000013753	kpnb1	100	97.603	Lepisosteus_oculatus
ENSMZEG00005004564	kpnb1	100	88.128	ENSLAFG00000001328	KPNB1	100	88.128	Loxodonta_africana
ENSMZEG00005004564	kpnb1	100	90.308	ENSMFAG00000030197	KPNB1	100	92.883	Macaca_fascicularis
ENSMZEG00005004564	kpnb1	99	91.580	ENSMMUG00000019760	KPNB1	99	91.580	Macaca_mulatta
ENSMZEG00005004564	kpnb1	100	92.808	ENSMNEG00000040927	KPNB1	100	92.808	Macaca_nemestrina
ENSMZEG00005004564	kpnb1	100	90.411	ENSMLEG00000038185	KPNB1	97	92.891	Mandrillus_leucophaeus
ENSMZEG00005004564	kpnb1	100	98.973	ENSMAMG00000011036	kpnb1	100	98.973	Mastacembelus_armatus
ENSMZEG00005004564	kpnb1	55	92.547	ENSMGAG00000002770	-	100	92.547	Meleagris_gallopavo
ENSMZEG00005004564	kpnb1	100	93.037	ENSMAUG00000006211	Kpnb1	100	93.037	Mesocricetus_auratus
ENSMZEG00005004564	kpnb1	100	93.151	ENSMICG00000012059	KPNB1	84	93.151	Microcebus_murinus
ENSMZEG00005004564	kpnb1	100	93.037	ENSMOCG00000003683	Kpnb1	100	93.037	Microtus_ochrogaster
ENSMZEG00005004564	kpnb1	100	93.379	ENSMODG00000012505	KPNB1	100	93.379	Monodelphis_domestica
ENSMZEG00005004564	kpnb1	100	98.973	ENSMALG00000000863	kpnb1	100	98.973	Monopterus_albus
ENSMZEG00005004564	kpnb1	94	93.431	MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	Mus_caroli
ENSMZEG00005004564	kpnb1	100	92.922	ENSMUSG00000001440	Kpnb1	100	92.922	Mus_musculus
ENSMZEG00005004564	kpnb1	100	92.132	ENSMPUG00000015220	KPNB1	100	92.132	Mustela_putorius_furo
ENSMZEG00005004564	kpnb1	100	88.269	ENSMLUG00000014522	KPNB1	100	88.269	Myotis_lucifugus
ENSMZEG00005004564	kpnb1	96	93.128	ENSNGAG00000017610	Kpnb1	100	93.120	Nannospalax_galili
ENSMZEG00005004564	kpnb1	100	100.000	ENSNBRG00000019305	kpnb1	100	100.000	Neolamprologus_brichardi
ENSMZEG00005004564	kpnb1	100	92.808	ENSNLEG00000001446	KPNB1	100	92.808	Nomascus_leucogenys
ENSMZEG00005004564	kpnb1	100	87.785	ENSMEUG00000014284	KPNB1	100	87.785	Notamacropus_eugenii
ENSMZEG00005004564	kpnb1	100	92.808	ENSODEG00000017287	KPNB1	100	92.808	Octodon_degus
ENSMZEG00005004564	kpnb1	100	99.886	ENSONIG00000009269	kpnb1	100	99.886	Oreochromis_niloticus
ENSMZEG00005004564	kpnb1	100	93.151	ENSOCUG00000015425	KPNB1	100	93.151	Oryctolagus_cuniculus
ENSMZEG00005004564	kpnb1	100	98.516	ENSORLG00000019936	kpnb1	100	98.516	Oryzias_latipes
ENSMZEG00005004564	kpnb1	100	98.516	ENSORLG00020021181	kpnb1	100	98.516	Oryzias_latipes_hni
ENSMZEG00005004564	kpnb1	100	98.402	ENSORLG00015012177	kpnb1	100	98.402	Oryzias_latipes_hsok
ENSMZEG00005004564	kpnb1	100	98.630	ENSOMEG00000021022	kpnb1	100	98.630	Oryzias_melastigma
ENSMZEG00005004564	kpnb1	100	93.037	ENSOGAG00000006153	KPNB1	100	93.037	Otolemur_garnettii
ENSMZEG00005004564	kpnb1	97	92.389	ENSOARG00000008469	KPNB1	99	92.389	Ovis_aries
ENSMZEG00005004564	kpnb1	100	92.808	ENSPPAG00000028842	KPNB1	100	92.808	Pan_paniscus
ENSMZEG00005004564	kpnb1	97	92.925	ENSPPRG00000022879	KPNB1	97	92.925	Panthera_pardus
ENSMZEG00005004564	kpnb1	97	92.925	ENSPTIG00000006870	KPNB1	97	92.925	Panthera_tigris_altaica
ENSMZEG00005004564	kpnb1	100	92.808	ENSPTRG00000009333	KPNB1	100	92.808	Pan_troglodytes
ENSMZEG00005004564	kpnb1	100	92.808	ENSPANG00000022099	KPNB1	100	92.808	Papio_anubis
ENSMZEG00005004564	kpnb1	100	97.146	ENSPKIG00000017563	kpnb1	100	97.146	Paramormyrops_kingsleyae
ENSMZEG00005004564	kpnb1	96	93.476	ENSPSIG00000009775	KPNB1	100	93.476	Pelodiscus_sinensis
ENSMZEG00005004564	kpnb1	100	90.764	ENSPMGG00000001041	kpnb1	93	90.764	Periophthalmus_magnuspinnatus
ENSMZEG00005004564	kpnb1	100	93.037	ENSPEMG00000017783	Kpnb1	100	93.037	Peromyscus_maniculatus_bairdii
ENSMZEG00005004564	kpnb1	99	84.966	ENSPMAG00000007117	kpnb1	99	84.966	Petromyzon_marinus
ENSMZEG00005004564	kpnb1	100	93.379	ENSPCIG00000001034	KPNB1	100	93.379	Phascolarctos_cinereus
ENSMZEG00005004564	kpnb1	100	97.831	ENSPFOG00000009014	kpnb1	100	97.831	Poecilia_formosa
ENSMZEG00005004564	kpnb1	100	97.831	ENSPLAG00000010922	kpnb1	100	97.831	Poecilia_latipinna
ENSMZEG00005004564	kpnb1	100	97.831	ENSPREG00000012268	kpnb1	100	97.831	Poecilia_reticulata
ENSMZEG00005004564	kpnb1	100	92.352	ENSPPYG00000025935	KPNB1	100	92.352	Pongo_abelii
ENSMZEG00005004564	kpnb1	75	79.333	ENSPCAG00000002526	KPNB1	78	79.333	Procavia_capensis
ENSMZEG00005004564	kpnb1	100	93.151	ENSPCOG00000026259	KPNB1	100	93.151	Propithecus_coquereli
ENSMZEG00005004564	kpnb1	100	92.694	ENSPVAG00000004910	KPNB1	100	92.694	Pteropus_vampyrus
ENSMZEG00005004564	kpnb1	100	95.524	ENSPNYG00000017703	kpnb1	96	99.872	Pundamilia_nyererei
ENSMZEG00005004564	kpnb1	99	89.437	ENSPNAG00000024047	kpnb1	98	89.437	Pygocentrus_nattereri
ENSMZEG00005004564	kpnb1	100	92.922	ENSRNOG00000009275	Kpnb1	100	92.922	Rattus_norvegicus
ENSMZEG00005004564	kpnb1	100	92.694	ENSRBIG00000002254	KPNB1	99	92.694	Rhinopithecus_bieti
ENSMZEG00005004564	kpnb1	99	92.263	ENSRROG00000030419	KPNB1	100	92.184	Rhinopithecus_roxellana
ENSMZEG00005004564	kpnb1	99	34.130	YLR347C	KAP95	99	34.130	Saccharomyces_cerevisiae
ENSMZEG00005004564	kpnb1	100	92.808	ENSSBOG00000030025	KPNB1	94	92.808	Saimiri_boliviensis_boliviensis
ENSMZEG00005004564	kpnb1	96	93.152	ENSSHAG00000018214	KPNB1	100	93.152	Sarcophilus_harrisii
ENSMZEG00005004564	kpnb1	100	97.831	ENSSFOG00015020000	kpnb1	100	97.831	Scleropages_formosus
ENSMZEG00005004564	kpnb1	100	99.087	ENSSDUG00000016218	kpnb1	100	99.087	Seriola_dumerili
ENSMZEG00005004564	kpnb1	98	99.069	ENSSLDG00000021549	kpnb1	97	99.069	Seriola_lalandi_dorsalis
ENSMZEG00005004564	kpnb1	100	92.808	ENSSPUG00000017799	KPNB1	100	92.808	Sphenodon_punctatus
ENSMZEG00005004564	kpnb1	100	98.973	ENSSPAG00000019346	kpnb1	100	98.973	Stegastes_partitus
ENSMZEG00005004564	kpnb1	100	93.151	ENSSSCG00000017514	KPNB1	100	93.151	Sus_scrofa
ENSMZEG00005004564	kpnb1	96	87.900	ENSTGUG00000003387	KPNB1	100	87.900	Taeniopygia_guttata
ENSMZEG00005004564	kpnb1	100	95.662	ENSTRUG00000000542	kpnb1	100	95.662	Takifugu_rubripes
ENSMZEG00005004564	kpnb1	100	96.575	ENSTNIG00000006494	kpnb1	100	96.575	Tetraodon_nigroviridis
ENSMZEG00005004564	kpnb1	96	93.120	ENSTTRG00000004682	KPNB1	100	93.120	Tursiops_truncatus
ENSMZEG00005004564	kpnb1	100	93.151	ENSUAMG00000025344	KPNB1	99	93.151	Ursus_americanus
ENSMZEG00005004564	kpnb1	98	91.986	ENSUMAG00000016471	KPNB1	98	91.986	Ursus_maritimus
ENSMZEG00005004564	kpnb1	100	79.452	ENSVPAG00000003675	KPNB1	100	79.452	Vicugna_pacos
ENSMZEG00005004564	kpnb1	100	93.151	ENSVVUG00000003085	KPNB1	100	93.151	Vulpes_vulpes
ENSMZEG00005004564	kpnb1	100	92.352	ENSXETG00000014717	kpnb1	100	92.352	Xenopus_tropicalis
ENSMZEG00005004564	kpnb1	100	97.717	ENSXMAG00000018792	kpnb1	100	97.717	Xiphophorus_maculatus