EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004578 (Gene tree)
Gene ID: 101467858
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2284 bases
Position: chrLG18:18785212-18787495
Accession: 101467858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005937	zf-C2H2	PF00096.26	2.7e-23	1	5
ENSMZEP00005005937	zf-C2H2	PF00096.26	2.7e-23	2	5
ENSMZEP00005005937	zf-C2H2	PF00096.26	2.7e-23	3	5
ENSMZEP00005005937	zf-C2H2	PF00096.26	2.7e-23	4	5
ENSMZEP00005005937	zf-C2H2	PF00096.26	2.7e-23	5	5
ENSMZEP00005005937	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006194	-	1194	XM_024806151	ENSMZEP00005005937	397 (aa)	XP_024661919	UPI000329DF75

Gene Model

Click here to download ENSMZEG00005004578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004578	gfi1aa	100	90.226	ENSAPOG00000005043	gfi1aa	100	90.226	Acanthochromis_polyacanthus
ENSMZEG00005004578	gfi1aa	100	91.709	ENSACIG00000021378	gfi1aa	100	91.709	Amphilophus_citrinellus
ENSMZEG00005004578	gfi1aa	100	89.223	ENSAOCG00000022957	gfi1aa	100	89.223	Amphiprion_ocellaris
ENSMZEG00005004578	gfi1aa	100	89.474	ENSAPEG00000014539	gfi1aa	100	89.474	Amphiprion_percula
ENSMZEG00005004578	gfi1aa	100	84.250	ENSATEG00000019026	gfi1aa	100	87.018	Anabas_testudineus
ENSMZEG00005004578	gfi1aa	100	100.000	ENSACLG00000008641	gfi1aa	100	100.000	Astatotilapia_calliptera
ENSMZEG00005004578	gfi1aa	100	62.750	ENSDARG00000020746	gfi1aa	100	62.750	Danio_rerio
ENSMZEG00005004578	gfi1aa	100	95.970	ENSHBUG00000007389	gfi1aa	100	95.970	Haplochromis_burtoni
ENSMZEG00005004578	gfi1aa	100	77.387	ENSKMAG00000002148	gfi1aa	100	77.638	Kryptolebias_marmoratus
ENSMZEG00005004578	gfi1aa	100	79.302	ENSLBEG00000006603	gfi1aa	100	79.302	Labrus_bergylta
ENSMZEG00005004578	gfi1aa	100	80.500	ENSMAMG00000004896	gfi1aa	100	80.750	Mastacembelus_armatus
ENSMZEG00005004578	gfi1aa	83	77.891	ENSMMOG00000006167	gfi1aa	99	77.891	Mola_mola
ENSMZEG00005004578	gfi1aa	100	99.748	ENSNBRG00000002673	gfi1aa	100	99.748	Neolamprologus_brichardi
ENSMZEG00005004578	gfi1aa	100	96.725	ENSPNYG00000002189	gfi1aa	100	96.725	Pundamilia_nyererei
ENSMZEG00005004578	gfi1aa	100	80.296	ENSSMAG00000006797	gfi1aa	100	80.788	Scophthalmus_maximus
ENSMZEG00005004578	gfi1aa	100	86.070	ENSSDUG00000011654	gfi1aa	100	86.070	Seriola_dumerili
ENSMZEG00005004578	gfi1aa	100	82.836	ENSSLDG00000016512	gfi1aa	100	82.836	Seriola_lalandi_dorsalis
ENSMZEG00005004578	gfi1aa	85	87.097	ENSSPAG00000000927	gfi1aa	94	87.097	Stegastes_partitus
ENSMZEG00005004578	gfi1aa	100	78.055	ENSTRUG00000004744	gfi1aa	100	78.055	Takifugu_rubripes