EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004617 (Gene tree)
Gene ID: 101474936
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 3438 bases
Position: chrLG19:7078534-7081971
Accession: 101474936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005005955	RRM_1	PF00076.22	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006212	-	1856	XM_004569936	ENSMZEP00005005955	99 (aa)	XP_004569993	UPI000D2FB974

Gene Model

Click here to download ENSMZEG00005004617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004617	slirp	86	57.647	ENSG00000119705	SLIRP	92	60.000	Homo_sapiens
ENSMZEG00005004617	slirp	99	84.694	ENSAPOG00000001298	slirp	98	84.694	Acanthochromis_polyacanthus
ENSMZEG00005004617	slirp	71	57.143	ENSAMEG00000003975	SLIRP	77	57.143	Ailuropoda_melanoleuca
ENSMZEG00005004617	slirp	100	88.889	ENSACIG00000023083	slirp	98	88.889	Amphilophus_citrinellus
ENSMZEG00005004617	slirp	100	86.869	ENSAOCG00000006342	slirp	100	86.869	Amphiprion_ocellaris
ENSMZEG00005004617	slirp	100	86.869	ENSAPEG00000015917	slirp	100	86.869	Amphiprion_percula
ENSMZEG00005004617	slirp	99	86.735	ENSAPEG00000015719	-	100	86.735	Amphiprion_percula
ENSMZEG00005004617	slirp	99	77.551	ENSATEG00000013525	slirp	98	77.551	Anabas_testudineus
ENSMZEG00005004617	slirp	97	65.625	ENSAMXG00000018693	slirp	96	65.625	Astyanax_mexicanus
ENSMZEG00005004617	slirp	89	53.409	ENSCJAG00000016946	SLIRP	81	53.409	Callithrix_jacchus
ENSMZEG00005004617	slirp	89	53.333	ENSCAFG00020015876	-	81	53.333	Canis_lupus_dingo
ENSMZEG00005004617	slirp	89	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSMZEG00005004617	slirp	90	56.180	ENSCATG00000036327	SLIRP	80	56.180	Cercocebus_atys
ENSMZEG00005004617	slirp	90	57.303	ENSCSAG00000011736	SLIRP	80	57.303	Chlorocebus_sabaeus
ENSMZEG00005004617	slirp	80	64.557	ENSCPBG00000026327	SLIRP	80	64.557	Chrysemys_picta_bellii
ENSMZEG00005004617	slirp	68	64.179	ENSCANG00000032892	SLIRP	68	64.179	Colobus_angolensis_palliatus
ENSMZEG00005004617	slirp	89	48.889	ENSCGRG00001024068	Slirp	81	48.889	Cricetulus_griseus_chok1gshd
ENSMZEG00005004617	slirp	89	48.889	ENSCGRG00000017440	Slirp	81	48.889	Cricetulus_griseus_crigri
ENSMZEG00005004617	slirp	83	60.976	ENSCSEG00000015766	slirp	84	60.976	Cynoglossus_semilaevis
ENSMZEG00005004617	slirp	89	80.682	ENSCVAG00000012504	slirp	84	80.682	Cyprinodon_variegatus
ENSMZEG00005004617	slirp	95	79.787	ENSDARG00000097753	slirp	93	80.208	Danio_rerio
ENSMZEG00005004617	slirp	86	46.512	ENSDNOG00000007721	SLIRP	78	46.512	Dasypus_novemcinctus
ENSMZEG00005004617	slirp	89	49.438	ENSDORG00000012379	Slirp	80	49.438	Dipodomys_ordii
ENSMZEG00005004617	slirp	89	52.273	ENSETEG00000010345	SLIRP	81	51.685	Echinops_telfairi
ENSMZEG00005004617	slirp	90	55.056	ENSEASG00005020193	SLIRP	80	55.056	Equus_asinus_asinus
ENSMZEG00005004617	slirp	89	51.685	ENSEEUG00000007257	SLIRP	88	51.685	Erinaceus_europaeus
ENSMZEG00005004617	slirp	96	76.842	ENSELUG00000016800	slirp	94	76.842	Esox_lucius
ENSMZEG00005004617	slirp	77	57.895	ENSFCAG00000036326	SLIRP	76	57.895	Felis_catus
ENSMZEG00005004617	slirp	79	57.692	ENSFALG00000012583	SLIRP	85	52.222	Ficedula_albicollis
ENSMZEG00005004617	slirp	86	56.322	ENSFDAG00000008347	SLIRP	77	56.322	Fukomys_damarensis
ENSMZEG00005004617	slirp	81	83.750	ENSFHEG00000004709	slirp	87	83.750	Fundulus_heteroclitus
ENSMZEG00005004617	slirp	97	75.000	ENSGMOG00000016948	slirp	92	75.000	Gadus_morhua
ENSMZEG00005004617	slirp	89	59.091	ENSGALG00000031238	SLIRP	85	59.091	Gallus_gallus
ENSMZEG00005004617	slirp	99	77.551	ENSGAFG00000010998	slirp	98	77.551	Gambusia_affinis
ENSMZEG00005004617	slirp	79	82.051	ENSGACG00000020137	slirp	91	82.051	Gasterosteus_aculeatus
ENSMZEG00005004617	slirp	94	60.638	ENSGAGG00000009953	SLIRP	65	60.638	Gopherus_agassizii
ENSMZEG00005004617	slirp	86	57.647	ENSGGOG00000011059	-	77	57.647	Gorilla_gorilla
ENSMZEG00005004617	slirp	89	50.000	ENSHGLG00000018491	SLIRP	81	50.000	Heterocephalus_glaber_female
ENSMZEG00005004617	slirp	89	50.000	ENSHGLG00100014153	SLIRP	81	50.000	Heterocephalus_glaber_male
ENSMZEG00005004617	slirp	95	80.851	ENSHCOG00000006795	slirp	95	80.851	Hippocampus_comes
ENSMZEG00005004617	slirp	97	80.208	ENSIPUG00000010214	SLIRP	96	80.208	Ictalurus_punctatus
ENSMZEG00005004617	slirp	90	51.685	ENSSTOG00000034316	SLIRP	80	51.685	Ictidomys_tridecemlineatus
ENSMZEG00005004617	slirp	99	70.408	ENSKMAG00000002038	slirp	94	70.408	Kryptolebias_marmoratus
ENSMZEG00005004617	slirp	99	72.449	ENSLBEG00000007564	slirp	98	72.449	Labrus_bergylta
ENSMZEG00005004617	slirp	96	73.684	ENSLACG00000013434	SLIRP	91	73.684	Latimeria_chalumnae
ENSMZEG00005004617	slirp	89	51.136	ENSMFAG00000042960	SLIRP	72	61.194	Macaca_fascicularis
ENSMZEG00005004617	slirp	84	55.422	ENSMMUG00000029256	SLIRP	72	61.194	Macaca_mulatta
ENSMZEG00005004617	slirp	89	51.136	ENSMNEG00000028921	SLIRP	72	61.194	Macaca_nemestrina
ENSMZEG00005004617	slirp	68	61.194	ENSMLEG00000043644	SLIRP	68	61.194	Mandrillus_leucophaeus
ENSMZEG00005004617	slirp	90	49.438	ENSMAUG00000003857	Slirp	80	49.438	Mesocricetus_auratus
ENSMZEG00005004617	slirp	89	42.222	ENSMICG00000012080	SLIRP	65	57.143	Microcebus_murinus
ENSMZEG00005004617	slirp	72	57.746	ENSMOCG00000016019	Slirp	69	55.714	Microtus_ochrogaster
ENSMZEG00005004617	slirp	99	86.735	ENSMMOG00000018268	slirp	98	86.735	Mola_mola
ENSMZEG00005004617	slirp	71	58.571	ENSMODG00000005207	-	99	58.571	Monodelphis_domestica
ENSMZEG00005004617	slirp	98	77.320	ENSMALG00000012581	slirp	97	77.320	Monopterus_albus
ENSMZEG00005004617	slirp	87	51.136	MGP_CAROLIEiJ_G0017995	Slirp	81	51.136	Mus_caroli
ENSMZEG00005004617	slirp	86	51.724	ENSMUSG00000021040	Slirp	78	51.724	Mus_musculus
ENSMZEG00005004617	slirp	87	51.136	MGP_SPRETEiJ_G0018840	Slirp	79	51.136	Mus_spretus
ENSMZEG00005004617	slirp	89	54.545	ENSMLUG00000024998	-	79	54.545	Myotis_lucifugus
ENSMZEG00005004617	slirp	90	53.933	ENSMLUG00000029544	-	80	53.933	Myotis_lucifugus
ENSMZEG00005004617	slirp	86	48.276	ENSNGAG00000016363	Slirp	84	48.276	Nannospalax_galili
ENSMZEG00005004617	slirp	91	53.333	ENSNLEG00000032459	-	81	53.333	Nomascus_leucogenys
ENSMZEG00005004617	slirp	91	53.333	ENSNLEG00000027238	-	84	53.333	Nomascus_leucogenys
ENSMZEG00005004617	slirp	77	60.526	ENSODEG00000012580	SLIRP	76	60.000	Octodon_degus
ENSMZEG00005004617	slirp	100	98.990	ENSONIG00000011692	slirp	100	98.990	Oreochromis_niloticus
ENSMZEG00005004617	slirp	90	57.143	ENSOANG00000022366	SLIRP	82	57.143	Ornithorhynchus_anatinus
ENSMZEG00005004617	slirp	99	86.735	ENSORLG00000010761	slirp	76	86.735	Oryzias_latipes
ENSMZEG00005004617	slirp	99	85.714	ENSORLG00020022188	slirp	98	85.714	Oryzias_latipes_hni
ENSMZEG00005004617	slirp	99	86.735	ENSORLG00015020171	slirp	97	86.735	Oryzias_latipes_hsok
ENSMZEG00005004617	slirp	99	85.714	ENSOMEG00000019321	slirp	98	85.714	Oryzias_melastigma
ENSMZEG00005004617	slirp	86	56.471	ENSPPAG00000040710	-	77	56.471	Pan_paniscus
ENSMZEG00005004617	slirp	77	57.895	ENSPPRG00000014350	SLIRP	76	57.895	Panthera_pardus
ENSMZEG00005004617	slirp	77	57.895	ENSPTIG00000014196	SLIRP	76	57.895	Panthera_tigris_altaica
ENSMZEG00005004617	slirp	86	57.647	ENSPTRG00000030691	SLIRP	79	57.647	Pan_troglodytes
ENSMZEG00005004617	slirp	89	52.273	ENSPANG00000026323	SLIRP	72	62.687	Papio_anubis
ENSMZEG00005004617	slirp	67	71.212	ENSPKIG00000008831	slirp	65	71.212	Paramormyrops_kingsleyae
ENSMZEG00005004617	slirp	79	84.615	ENSPMGG00000010541	slirp	90	84.615	Periophthalmus_magnuspinnatus
ENSMZEG00005004617	slirp	72	54.930	ENSPEMG00000013234	Slirp	69	52.857	Peromyscus_maniculatus_bairdii
ENSMZEG00005004617	slirp	80	58.228	ENSPMAG00000009355	slirp	88	58.228	Petromyzon_marinus
ENSMZEG00005004617	slirp	79	52.564	ENSPCIG00000026842	-	84	52.564	Phascolarctos_cinereus
ENSMZEG00005004617	slirp	98	78.351	ENSPFOG00000006758	slirp	97	78.351	Poecilia_formosa
ENSMZEG00005004617	slirp	98	79.381	ENSPLAG00000011140	slirp	97	79.381	Poecilia_latipinna
ENSMZEG00005004617	slirp	98	78.351	ENSPMEG00000019535	slirp	97	78.351	Poecilia_mexicana
ENSMZEG00005004617	slirp	98	78.351	ENSPREG00000011673	slirp	97	78.351	Poecilia_reticulata
ENSMZEG00005004617	slirp	86	58.824	ENSPPYG00000006030	SLIRP	77	58.824	Pongo_abelii
ENSMZEG00005004617	slirp	78	53.247	ENSPCOG00000015159	SLIRP	65	54.286	Propithecus_coquereli
ENSMZEG00005004617	slirp	97	80.208	ENSPNAG00000008633	slirp	97	80.208	Pygocentrus_nattereri
ENSMZEG00005004617	slirp	66	63.077	ENSRBIG00000031396	-	65	63.077	Rhinopithecus_bieti
ENSMZEG00005004617	slirp	89	56.818	ENSRBIG00000032222	-	81	56.818	Rhinopithecus_bieti
ENSMZEG00005004617	slirp	68	61.194	ENSRBIG00000032998	-	62	61.194	Rhinopithecus_bieti
ENSMZEG00005004617	slirp	86	54.118	ENSRBIG00000035817	-	78	54.118	Rhinopithecus_bieti
ENSMZEG00005004617	slirp	68	62.687	ENSRROG00000017133	-	70	62.687	Rhinopithecus_roxellana
ENSMZEG00005004617	slirp	72	63.380	ENSRROG00000041312	-	70	63.380	Rhinopithecus_roxellana
ENSMZEG00005004617	slirp	66	64.615	ENSRROG00000035604	-	65	64.615	Rhinopithecus_roxellana
ENSMZEG00005004617	slirp	89	56.818	ENSRROG00000036656	-	81	56.818	Rhinopithecus_roxellana
ENSMZEG00005004617	slirp	82	54.321	ENSSBOG00000020014	SLIRP	78	57.333	Saimiri_boliviensis_boliviensis
ENSMZEG00005004617	slirp	97	63.542	ENSSFOG00015011165	slirp	96	63.542	Scleropages_formosus
ENSMZEG00005004617	slirp	99	53.000	ENSSMAG00000012930	slirp	98	53.000	Scophthalmus_maximus
ENSMZEG00005004617	slirp	99	83.673	ENSSDUG00000021883	slirp	64	83.673	Seriola_dumerili
ENSMZEG00005004617	slirp	99	83.673	ENSSLDG00000023136	slirp	89	83.673	Seriola_lalandi_dorsalis
ENSMZEG00005004617	slirp	87	64.773	ENSSPUG00000009346	SLIRP	90	64.773	Sphenodon_punctatus
ENSMZEG00005004617	slirp	99	68.367	ENSSPAG00000013477	slirp	98	68.367	Stegastes_partitus
ENSMZEG00005004617	slirp	89	54.444	ENSSSCG00000028167	SLIRP	81	54.444	Sus_scrofa
ENSMZEG00005004617	slirp	79	58.974	ENSTGUG00000012337	SLIRP	83	54.545	Taeniopygia_guttata
ENSMZEG00005004617	slirp	97	74.227	ENSTRUG00000020127	slirp	96	74.227	Takifugu_rubripes
ENSMZEG00005004617	slirp	89	56.044	ENSUAMG00000022445	SLIRP	81	56.044	Ursus_americanus
ENSMZEG00005004617	slirp	89	54.945	ENSUMAG00000007166	SLIRP	81	54.945	Ursus_maritimus
ENSMZEG00005004617	slirp	89	52.273	ENSVPAG00000001781	SLIRP	81	52.273	Vicugna_pacos
ENSMZEG00005004617	slirp	88	55.556	ENSVVUG00000004436	SLIRP	78	56.818	Vulpes_vulpes
ENSMZEG00005004617	slirp	80	75.949	ENSXETG00000030343	SLIRP	89	75.949	Xenopus_tropicalis
ENSMZEG00005004617	slirp	99	78.571	ENSXCOG00000009422	slirp	98	78.571	Xiphophorus_couchianus
ENSMZEG00005004617	slirp	99	79.592	ENSXMAG00000015655	slirp	98	79.592	Xiphophorus_maculatus