EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004796 (Gene tree)
Gene ID: 101463704
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6458 bases
Position: chrLG2:27753901-27760358
Accession: 101463704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005006160	RNase_H2_suC	PF08615.11	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006449	-	4344	XM_004545576	ENSMZEP00005006160	136 (aa)	XP_004545633	UPI00032A23E8

Gene Model

Click here to download ENSMZEG00005004796's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004796	rnaseh2c	100	87.500	ENSAPOG00000012901	rnaseh2c	99	87.500	Acanthochromis_polyacanthus
ENSMZEG00005004796	rnaseh2c	100	88.971	ENSACIG00000022433	rnaseh2c	100	88.971	Amphilophus_citrinellus
ENSMZEG00005004796	rnaseh2c	100	86.765	ENSAOCG00000016855	rnaseh2c	100	86.765	Amphiprion_ocellaris
ENSMZEG00005004796	rnaseh2c	100	87.500	ENSAPEG00000009850	rnaseh2c	100	87.500	Amphiprion_percula
ENSMZEG00005004796	rnaseh2c	100	83.824	ENSATEG00000014395	rnaseh2c	100	83.824	Anabas_testudineus
ENSMZEG00005004796	rnaseh2c	100	99.265	ENSACLG00000016950	rnaseh2c	100	99.265	Astatotilapia_calliptera
ENSMZEG00005004796	rnaseh2c	99	65.185	ENSAMXG00000001210	rnaseh2c	100	65.185	Astyanax_mexicanus
ENSMZEG00005004796	rnaseh2c	99	56.716	ENSCPBG00000023408	-	96	56.716	Chrysemys_picta_bellii
ENSMZEG00005004796	rnaseh2c	100	80.882	ENSCSEG00000005808	rnaseh2c	99	80.882	Cynoglossus_semilaevis
ENSMZEG00005004796	rnaseh2c	100	78.676	ENSCVAG00000006337	rnaseh2c	100	78.676	Cyprinodon_variegatus
ENSMZEG00005004796	rnaseh2c	100	64.706	ENSDARG00000089637	rnaseh2c	99	64.706	Danio_rerio
ENSMZEG00005004796	rnaseh2c	86	48.333	ENSEBUG00000014939	rnaseh2c	77	48.333	Eptatretus_burgeri
ENSMZEG00005004796	rnaseh2c	99	69.630	ENSELUG00000007345	rnaseh2c	97	69.630	Esox_lucius
ENSMZEG00005004796	rnaseh2c	96	79.231	ENSFHEG00000002419	rnaseh2c	95	79.231	Fundulus_heteroclitus
ENSMZEG00005004796	rnaseh2c	65	74.157	ENSGMOG00000008727	rnaseh2c	99	74.157	Gadus_morhua
ENSMZEG00005004796	rnaseh2c	100	79.412	ENSGAFG00000016755	rnaseh2c	83	79.412	Gambusia_affinis
ENSMZEG00005004796	rnaseh2c	99	56.716	ENSGAGG00000008193	-	96	56.716	Gopherus_agassizii
ENSMZEG00005004796	rnaseh2c	100	98.529	ENSHBUG00000012806	rnaseh2c	100	98.529	Haplochromis_burtoni
ENSMZEG00005004796	rnaseh2c	100	73.529	ENSHCOG00000007177	rnaseh2c	100	73.529	Hippocampus_comes
ENSMZEG00005004796	rnaseh2c	100	63.971	ENSIPUG00000018044	rnaseh2c	100	63.971	Ictalurus_punctatus
ENSMZEG00005004796	rnaseh2c	100	78.676	ENSKMAG00000004184	rnaseh2c	100	78.676	Kryptolebias_marmoratus
ENSMZEG00005004796	rnaseh2c	100	81.022	ENSLBEG00000005742	rnaseh2c	100	81.022	Labrus_bergylta
ENSMZEG00005004796	rnaseh2c	95	57.364	ENSLACG00000010120	-	93	57.576	Latimeria_chalumnae
ENSMZEG00005004796	rnaseh2c	100	80.147	ENSMAMG00000021610	rnaseh2c	100	80.147	Mastacembelus_armatus
ENSMZEG00005004796	rnaseh2c	100	81.618	ENSMMOG00000002869	rnaseh2c	100	81.618	Mola_mola
ENSMZEG00005004796	rnaseh2c	100	81.752	ENSMALG00000012198	rnaseh2c	100	81.752	Monopterus_albus
ENSMZEG00005004796	rnaseh2c	100	98.529	ENSNBRG00000001462	rnaseh2c	100	98.529	Neolamprologus_brichardi
ENSMZEG00005004796	rnaseh2c	100	97.794	ENSONIG00000005338	rnaseh2c	99	97.794	Oreochromis_niloticus
ENSMZEG00005004796	rnaseh2c	100	77.206	ENSORLG00000023473	rnaseh2c	100	77.206	Oryzias_latipes
ENSMZEG00005004796	rnaseh2c	100	77.206	ENSORLG00020019053	rnaseh2c	91	77.206	Oryzias_latipes_hni
ENSMZEG00005004796	rnaseh2c	100	77.206	ENSORLG00015017067	rnaseh2c	91	77.206	Oryzias_latipes_hsok
ENSMZEG00005004796	rnaseh2c	100	76.471	ENSOMEG00000018607	rnaseh2c	100	76.471	Oryzias_melastigma
ENSMZEG00005004796	rnaseh2c	100	60.294	ENSPKIG00000019331	rnaseh2c	100	60.294	Paramormyrops_kingsleyae
ENSMZEG00005004796	rnaseh2c	100	75.735	ENSPFOG00000009415	rnaseh2c	100	75.735	Poecilia_formosa
ENSMZEG00005004796	rnaseh2c	100	76.471	ENSPLAG00000023330	rnaseh2c	100	76.471	Poecilia_latipinna
ENSMZEG00005004796	rnaseh2c	100	76.471	ENSPMEG00000003696	rnaseh2c	100	76.471	Poecilia_mexicana
ENSMZEG00005004796	rnaseh2c	100	71.429	ENSPREG00000015384	rnaseh2c	73	71.429	Poecilia_reticulata
ENSMZEG00005004796	rnaseh2c	100	98.529	ENSPNYG00000014766	rnaseh2c	100	98.529	Pundamilia_nyererei
ENSMZEG00005004796	rnaseh2c	99	63.704	ENSPNAG00000019111	rnaseh2c	99	63.704	Pygocentrus_nattereri
ENSMZEG00005004796	rnaseh2c	99	68.889	ENSSFOG00015005760	rnaseh2c	99	68.889	Scleropages_formosus
ENSMZEG00005004796	rnaseh2c	100	84.559	ENSSMAG00000017738	rnaseh2c	100	84.559	Scophthalmus_maximus
ENSMZEG00005004796	rnaseh2c	100	84.559	ENSSDUG00000017285	rnaseh2c	100	84.559	Seriola_dumerili
ENSMZEG00005004796	rnaseh2c	100	86.029	ENSSLDG00000016030	rnaseh2c	100	86.029	Seriola_lalandi_dorsalis
ENSMZEG00005004796	rnaseh2c	96	51.880	ENSSPUG00000000842	-	88	51.493	Sphenodon_punctatus
ENSMZEG00005004796	rnaseh2c	100	85.294	ENSSPAG00000007536	rnaseh2c	100	85.294	Stegastes_partitus
ENSMZEG00005004796	rnaseh2c	100	74.265	ENSTRUG00000021845	rnaseh2c	100	74.265	Takifugu_rubripes
ENSMZEG00005004796	rnaseh2c	100	78.676	ENSTNIG00000000431	rnaseh2c	100	78.676	Tetraodon_nigroviridis
ENSMZEG00005004796	rnaseh2c	99	50.746	ENSXETG00000032466	-	98	50.746	Xenopus_tropicalis
ENSMZEG00005004796	rnaseh2c	100	76.471	ENSXCOG00000001611	rnaseh2c	100	76.471	Xiphophorus_couchianus
ENSMZEG00005004796	rnaseh2c	100	78.676	ENSXMAG00000003147	rnaseh2c	83	78.676	Xiphophorus_maculatus