EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004892 (Gene tree)
Gene ID: 101482086
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2207 bases
Position: chrLG7:15067668-15069874
Accession: 101482086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005006332	FDF	PF09532.10	9.4e-10	1	1
ENSMZEP00005006332	LSM14	PF12701.7	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006621	-	1437	XM_004567709	ENSMZEP00005006332	478 (aa)	XP_004567766	UPI0003297626

Gene Model

Click here to download ENSMZEG00005004892's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004892	edc3	100	67.780	ENSG00000179151	EDC3	100	81.481	Homo_sapiens
ENSMZEG00005004892	edc3	100	92.469	ENSAPOG00000010791	edc3	100	92.469	Acanthochromis_polyacanthus
ENSMZEG00005004892	edc3	100	59.312	ENSAPOG00000008655	EDC3	100	59.312	Acanthochromis_polyacanthus
ENSMZEG00005004892	edc3	100	67.191	ENSAMEG00000008963	EDC3	100	67.191	Ailuropoda_melanoleuca
ENSMZEG00005004892	edc3	99	64.659	ENSACIG00000005330	EDC3	99	64.659	Amphilophus_citrinellus
ENSMZEG00005004892	edc3	100	96.862	ENSACIG00000017751	edc3	100	96.862	Amphilophus_citrinellus
ENSMZEG00005004892	edc3	100	92.678	ENSAOCG00000005431	edc3	100	92.678	Amphiprion_ocellaris
ENSMZEG00005004892	edc3	100	63.975	ENSAOCG00000009103	-	100	63.975	Amphiprion_ocellaris
ENSMZEG00005004892	edc3	100	92.678	ENSAPEG00000000968	edc3	100	92.678	Amphiprion_percula
ENSMZEG00005004892	edc3	100	64.182	ENSAPEG00000007841	EDC3	100	64.182	Amphiprion_percula
ENSMZEG00005004892	edc3	100	93.515	ENSATEG00000015505	edc3	100	93.515	Anabas_testudineus
ENSMZEG00005004892	edc3	100	66.736	ENSATEG00000004205	-	100	66.736	Anabas_testudineus
ENSMZEG00005004892	edc3	83	73.869	ENSAPLG00000008957	EDC3	88	73.869	Anas_platyrhynchos
ENSMZEG00005004892	edc3	77	65.657	ENSACAG00000000460	-	100	65.657	Anolis_carolinensis
ENSMZEG00005004892	edc3	100	68.369	ENSANAG00000024078	EDC3	100	68.369	Aotus_nancymaae
ENSMZEG00005004892	edc3	99	65.904	ENSACLG00000018776	-	99	65.904	Astatotilapia_calliptera
ENSMZEG00005004892	edc3	100	99.791	ENSACLG00000007232	edc3	100	99.791	Astatotilapia_calliptera
ENSMZEG00005004892	edc3	100	79.563	ENSAMXG00000001589	edc3	100	79.563	Astyanax_mexicanus
ENSMZEG00005004892	edc3	100	67.583	ENSBTAG00000007308	EDC3	100	67.583	Bos_taurus
ENSMZEG00005004892	edc3	100	67.976	ENSCJAG00000017681	EDC3	100	67.976	Callithrix_jacchus
ENSMZEG00005004892	edc3	100	66.994	ENSCAFG00000017935	EDC3	100	66.994	Canis_familiaris
ENSMZEG00005004892	edc3	100	66.994	ENSCAFG00020003909	EDC3	100	66.994	Canis_lupus_dingo
ENSMZEG00005004892	edc3	100	67.583	ENSCHIG00000023658	EDC3	100	67.583	Capra_hircus
ENSMZEG00005004892	edc3	100	68.173	ENSTSYG00000004822	EDC3	100	68.173	Carlito_syrichta
ENSMZEG00005004892	edc3	100	67.780	ENSCPOG00000015595	EDC3	100	67.780	Cavia_porcellus
ENSMZEG00005004892	edc3	100	67.780	ENSCCAG00000021663	EDC3	100	67.780	Cebus_capucinus
ENSMZEG00005004892	edc3	100	68.369	ENSCATG00000037511	EDC3	100	68.369	Cercocebus_atys
ENSMZEG00005004892	edc3	100	67.583	ENSCLAG00000005700	EDC3	100	67.583	Chinchilla_lanigera
ENSMZEG00005004892	edc3	100	68.369	ENSCSAG00000014239	EDC3	100	68.369	Chlorocebus_sabaeus
ENSMZEG00005004892	edc3	100	68.762	ENSCPBG00000024239	EDC3	100	68.762	Chrysemys_picta_bellii
ENSMZEG00005004892	edc3	100	38.431	ENSCING00000022142	-	99	38.431	Ciona_intestinalis
ENSMZEG00005004892	edc3	100	68.369	ENSCANG00000028699	EDC3	100	68.369	Colobus_angolensis_palliatus
ENSMZEG00005004892	edc3	100	67.387	ENSCGRG00001013874	Edc3	100	67.387	Cricetulus_griseus_chok1gshd
ENSMZEG00005004892	edc3	100	67.387	ENSCGRG00000011885	Edc3	100	67.387	Cricetulus_griseus_crigri
ENSMZEG00005004892	edc3	99	91.405	ENSCSEG00000012996	edc3	99	91.405	Cynoglossus_semilaevis
ENSMZEG00005004892	edc3	100	88.912	ENSCVAG00000008023	edc3	100	88.912	Cyprinodon_variegatus
ENSMZEG00005004892	edc3	99	76.832	ENSDARG00000051931	edc3	99	76.832	Danio_rerio
ENSMZEG00005004892	edc3	100	59.223	ENSDNOG00000030661	EDC3	100	59.223	Dasypus_novemcinctus
ENSMZEG00005004892	edc3	68	81.481	ENSETEG00000002398	-	64	81.481	Echinops_telfairi
ENSMZEG00005004892	edc3	100	67.387	ENSEASG00005005071	EDC3	100	67.387	Equus_asinus_asinus
ENSMZEG00005004892	edc3	100	67.387	ENSECAG00000017994	EDC3	100	67.387	Equus_caballus
ENSMZEG00005004892	edc3	100	80.579	ENSELUG00000005794	edc3	100	80.579	Esox_lucius
ENSMZEG00005004892	edc3	100	71.250	ENSELUG00000007607	EDC3	100	71.250	Esox_lucius
ENSMZEG00005004892	edc3	100	67.191	ENSFCAG00000002014	EDC3	100	67.191	Felis_catus
ENSMZEG00005004892	edc3	98	67.269	ENSFALG00000004543	EDC3	96	67.269	Ficedula_albicollis
ENSMZEG00005004892	edc3	100	68.369	ENSFDAG00000012582	EDC3	100	68.369	Fukomys_damarensis
ENSMZEG00005004892	edc3	100	89.749	ENSFHEG00000009375	edc3	100	89.749	Fundulus_heteroclitus
ENSMZEG00005004892	edc3	100	85.239	ENSGMOG00000002715	edc3	100	85.239	Gadus_morhua
ENSMZEG00005004892	edc3	100	68.245	ENSGALG00000040181	EDC3	100	68.245	Gallus_gallus
ENSMZEG00005004892	edc3	100	89.540	ENSGAFG00000014433	edc3	100	89.540	Gambusia_affinis
ENSMZEG00005004892	edc3	99	61.252	ENSGACG00000014671	EDC3	99	61.252	Gasterosteus_aculeatus
ENSMZEG00005004892	edc3	100	90.167	ENSGACG00000009783	edc3	100	90.167	Gasterosteus_aculeatus
ENSMZEG00005004892	edc3	100	69.231	ENSGAGG00000023477	EDC3	100	69.231	Gopherus_agassizii
ENSMZEG00005004892	edc3	100	67.780	ENSGGOG00000003552	EDC3	100	67.780	Gorilla_gorilla
ENSMZEG00005004892	edc3	100	99.791	ENSHBUG00000003635	edc3	100	99.791	Haplochromis_burtoni
ENSMZEG00005004892	edc3	99	65.904	ENSHBUG00000020817	EDC3	99	65.904	Haplochromis_burtoni
ENSMZEG00005004892	edc3	100	86.250	ENSHCOG00000016834	edc3	100	86.250	Hippocampus_comes
ENSMZEG00005004892	edc3	99	79.317	ENSIPUG00000005695	edc3	100	79.317	Ictalurus_punctatus
ENSMZEG00005004892	edc3	100	68.566	ENSSTOG00000013936	EDC3	100	68.566	Ictidomys_tridecemlineatus
ENSMZEG00005004892	edc3	100	67.583	ENSJJAG00000008074	Edc3	100	67.583	Jaculus_jaculus
ENSMZEG00005004892	edc3	100	63.693	ENSKMAG00000001987	EDC3	100	63.693	Kryptolebias_marmoratus
ENSMZEG00005004892	edc3	100	90.397	ENSKMAG00000001243	edc3	100	90.397	Kryptolebias_marmoratus
ENSMZEG00005004892	edc3	100	91.004	ENSLBEG00000013435	edc3	99	91.004	Labrus_bergylta
ENSMZEG00005004892	edc3	100	64.271	ENSLBEG00000017984	EDC3	100	64.271	Labrus_bergylta
ENSMZEG00005004892	edc3	100	70.233	ENSLACG00000014149	EDC3	100	70.233	Latimeria_chalumnae
ENSMZEG00005004892	edc3	99	71.862	ENSLOCG00000014625	edc3	99	72.065	Lepisosteus_oculatus
ENSMZEG00005004892	edc3	100	67.913	ENSLAFG00000002992	EDC3	100	67.913	Loxodonta_africana
ENSMZEG00005004892	edc3	100	67.780	ENSMFAG00000043074	EDC3	100	67.780	Macaca_fascicularis
ENSMZEG00005004892	edc3	100	67.780	ENSMMUG00000011071	EDC3	100	67.780	Macaca_mulatta
ENSMZEG00005004892	edc3	100	67.780	ENSMNEG00000035316	EDC3	100	67.780	Macaca_nemestrina
ENSMZEG00005004892	edc3	100	68.369	ENSMLEG00000030372	EDC3	100	68.369	Mandrillus_leucophaeus
ENSMZEG00005004892	edc3	99	64.570	ENSMAMG00000005423	-	99	64.570	Mastacembelus_armatus
ENSMZEG00005004892	edc3	100	91.841	ENSMAMG00000000505	edc3	100	91.841	Mastacembelus_armatus
ENSMZEG00005004892	edc3	99	65.235	ENSMZEG00005005654	EDC3	99	65.235	Maylandia_zebra
ENSMZEG00005004892	edc3	100	68.245	ENSMGAG00000002617	EDC3	100	68.245	Meleagris_gallopavo
ENSMZEG00005004892	edc3	100	67.976	ENSMICG00000043190	EDC3	100	67.976	Microcebus_murinus
ENSMZEG00005004892	edc3	100	67.780	ENSMOCG00000016205	Edc3	100	67.780	Microtus_ochrogaster
ENSMZEG00005004892	edc3	99	92.034	ENSMMOG00000012278	edc3	99	92.034	Mola_mola
ENSMZEG00005004892	edc3	100	67.976	ENSMODG00000009442	EDC3	100	67.976	Monodelphis_domestica
ENSMZEG00005004892	edc3	100	93.096	ENSMALG00000008658	edc3	100	93.096	Monopterus_albus
ENSMZEG00005004892	edc3	100	68.173	MGP_CAROLIEiJ_G0032280	Edc3	100	78.947	Mus_caroli
ENSMZEG00005004892	edc3	100	68.173	ENSMUSG00000038957	Edc3	100	78.947	Mus_musculus
ENSMZEG00005004892	edc3	100	68.173	MGP_PahariEiJ_G0015146	Edc3	100	78.947	Mus_pahari
ENSMZEG00005004892	edc3	100	68.173	MGP_SPRETEiJ_G0033420	Edc3	100	78.947	Mus_spretus
ENSMZEG00005004892	edc3	100	67.191	ENSMPUG00000017293	EDC3	100	67.191	Mustela_putorius_furo
ENSMZEG00005004892	edc3	100	67.969	ENSMLUG00000016382	EDC3	100	67.969	Myotis_lucifugus
ENSMZEG00005004892	edc3	100	67.780	ENSNGAG00000010923	Edc3	100	67.780	Nannospalax_galili
ENSMZEG00005004892	edc3	100	98.954	ENSNBRG00000002434	edc3	100	98.954	Neolamprologus_brichardi
ENSMZEG00005004892	edc3	99	65.975	ENSNBRG00000007881	EDC3	99	65.975	Neolamprologus_brichardi
ENSMZEG00005004892	edc3	100	58.546	ENSNLEG00000014577	EDC3	100	58.546	Nomascus_leucogenys
ENSMZEG00005004892	edc3	100	67.653	ENSMEUG00000009077	EDC3	100	67.653	Notamacropus_eugenii
ENSMZEG00005004892	edc3	84	81.481	ENSOPRG00000009540	-	79	81.481	Ochotona_princeps
ENSMZEG00005004892	edc3	100	99.163	ENSONIG00000008434	edc3	100	99.163	Oreochromis_niloticus
ENSMZEG00005004892	edc3	99	61.822	ENSONIG00000002932	-	100	61.702	Oreochromis_niloticus
ENSMZEG00005004892	edc3	77	63.728	ENSOCUG00000017740	EDC3	86	63.728	Oryctolagus_cuniculus
ENSMZEG00005004892	edc3	100	63.071	ENSORLG00000014399	-	98	63.071	Oryzias_latipes
ENSMZEG00005004892	edc3	100	86.848	ENSORLG00000004883	edc3	100	86.848	Oryzias_latipes
ENSMZEG00005004892	edc3	100	87.265	ENSORLG00020012262	edc3	100	87.265	Oryzias_latipes_hni
ENSMZEG00005004892	edc3	100	63.071	ENSORLG00020019446	-	100	63.071	Oryzias_latipes_hni
ENSMZEG00005004892	edc3	100	63.071	ENSORLG00015017635	-	96	63.071	Oryzias_latipes_hsok
ENSMZEG00005004892	edc3	100	87.474	ENSORLG00015005634	edc3	100	87.474	Oryzias_latipes_hsok
ENSMZEG00005004892	edc3	100	64.389	ENSOMEG00000017354	EDC3	100	64.389	Oryzias_melastigma
ENSMZEG00005004892	edc3	100	87.238	ENSOMEG00000014026	edc3	100	87.238	Oryzias_melastigma
ENSMZEG00005004892	edc3	100	68.173	ENSOGAG00000014441	EDC3	100	68.369	Otolemur_garnettii
ENSMZEG00005004892	edc3	100	66.863	ENSOARG00000003476	EDC3	100	67.255	Ovis_aries
ENSMZEG00005004892	edc3	100	67.780	ENSPPAG00000040143	EDC3	100	67.780	Pan_paniscus
ENSMZEG00005004892	edc3	100	67.191	ENSPPRG00000006257	EDC3	100	67.191	Panthera_pardus
ENSMZEG00005004892	edc3	100	67.191	ENSPTIG00000017424	EDC3	100	67.191	Panthera_tigris_altaica
ENSMZEG00005004892	edc3	100	67.780	ENSPTRG00000007279	EDC3	100	67.780	Pan_troglodytes
ENSMZEG00005004892	edc3	100	68.369	ENSPANG00000015997	EDC3	100	68.369	Papio_anubis
ENSMZEG00005004892	edc3	100	75.152	ENSPKIG00000019810	EDC3	100	75.152	Paramormyrops_kingsleyae
ENSMZEG00005004892	edc3	100	74.606	ENSPKIG00000004416	edc3	100	74.606	Paramormyrops_kingsleyae
ENSMZEG00005004892	edc3	100	64.244	ENSPSIG00000008474	EDC3	100	64.440	Pelodiscus_sinensis
ENSMZEG00005004892	edc3	100	88.125	ENSPMGG00000007223	edc3	100	88.125	Periophthalmus_magnuspinnatus
ENSMZEG00005004892	edc3	100	67.387	ENSPEMG00000015260	Edc3	100	67.387	Peromyscus_maniculatus_bairdii
ENSMZEG00005004892	edc3	100	67.456	ENSPCIG00000006276	EDC3	70	67.589	Phascolarctos_cinereus
ENSMZEG00005004892	edc3	100	89.749	ENSPFOG00000012204	edc3	100	89.749	Poecilia_formosa
ENSMZEG00005004892	edc3	100	89.749	ENSPLAG00000014420	edc3	100	89.749	Poecilia_latipinna
ENSMZEG00005004892	edc3	100	89.749	ENSPMEG00000023289	edc3	100	89.749	Poecilia_mexicana
ENSMZEG00005004892	edc3	100	89.331	ENSPREG00000016022	edc3	100	89.331	Poecilia_reticulata
ENSMZEG00005004892	edc3	100	67.387	ENSPPYG00000006642	EDC3	100	67.387	Pongo_abelii
ENSMZEG00005004892	edc3	93	81.481	ENSPCAG00000002802	EDC3	88	81.481	Procavia_capensis
ENSMZEG00005004892	edc3	100	67.780	ENSPCOG00000013364	EDC3	100	67.780	Propithecus_coquereli
ENSMZEG00005004892	edc3	100	67.843	ENSPVAG00000014733	EDC3	100	67.843	Pteropus_vampyrus
ENSMZEG00005004892	edc3	100	99.582	ENSPNYG00000021797	edc3	100	99.582	Pundamilia_nyererei
ENSMZEG00005004892	edc3	99	65.904	ENSPNYG00000009669	EDC3	99	65.904	Pundamilia_nyererei
ENSMZEG00005004892	edc3	100	79.960	ENSPNAG00000019657	edc3	100	79.960	Pygocentrus_nattereri
ENSMZEG00005004892	edc3	99	68.182	ENSRNOG00000019579	Edc3	99	67.589	Rattus_norvegicus
ENSMZEG00005004892	edc3	100	68.369	ENSRBIG00000019488	EDC3	100	68.369	Rhinopithecus_bieti
ENSMZEG00005004892	edc3	100	68.369	ENSRROG00000034959	EDC3	100	68.369	Rhinopithecus_roxellana
ENSMZEG00005004892	edc3	100	67.780	ENSSBOG00000004896	EDC3	100	67.780	Saimiri_boliviensis_boliviensis
ENSMZEG00005004892	edc3	96	67.008	ENSSHAG00000015075	EDC3	95	67.008	Sarcophilus_harrisii
ENSMZEG00005004892	edc3	100	72.257	ENSSFOG00015002439	edc3	100	72.671	Scleropages_formosus
ENSMZEG00005004892	edc3	100	78.529	ENSSFOG00015016939	edc3	100	78.529	Scleropages_formosus
ENSMZEG00005004892	edc3	100	91.423	ENSSMAG00000010695	edc3	100	91.423	Scophthalmus_maximus
ENSMZEG00005004892	edc3	99	64.865	ENSSMAG00000010176	-	99	64.865	Scophthalmus_maximus
ENSMZEG00005004892	edc3	100	67.909	ENSSDUG00000007671	EDC3	100	67.909	Seriola_dumerili
ENSMZEG00005004892	edc3	100	92.678	ENSSDUG00000021844	edc3	100	92.678	Seriola_dumerili
ENSMZEG00005004892	edc3	100	92.469	ENSSLDG00000022046	edc3	100	92.469	Seriola_lalandi_dorsalis
ENSMZEG00005004892	edc3	79	77.823	ENSSARG00000003907	EDC3	80	77.823	Sorex_araneus
ENSMZEG00005004892	edc3	100	67.191	ENSSPUG00000008232	EDC3	100	67.191	Sphenodon_punctatus
ENSMZEG00005004892	edc3	100	65.217	ENSSPAG00000020327	EDC3	100	65.631	Stegastes_partitus
ENSMZEG00005004892	edc3	100	93.305	ENSSPAG00000010009	edc3	100	93.305	Stegastes_partitus
ENSMZEG00005004892	edc3	100	70.208	ENSSSCG00000001903	EDC3	100	70.208	Sus_scrofa
ENSMZEG00005004892	edc3	100	68.639	ENSTGUG00000004007	EDC3	100	68.639	Taeniopygia_guttata
ENSMZEG00005004892	edc3	100	89.331	ENSTRUG00000017078	edc3	100	89.331	Takifugu_rubripes
ENSMZEG00005004892	edc3	100	88.333	ENSTNIG00000016047	edc3	100	88.333	Tetraodon_nigroviridis
ENSMZEG00005004892	edc3	100	68.307	ENSTTRG00000007990	EDC3	100	68.307	Tursiops_truncatus
ENSMZEG00005004892	edc3	100	67.191	ENSUAMG00000026710	-	100	67.191	Ursus_americanus
ENSMZEG00005004892	edc3	100	67.191	ENSUMAG00000005006	EDC3	96	67.191	Ursus_maritimus
ENSMZEG00005004892	edc3	84	72.222	ENSVPAG00000003499	-	79	72.222	Vicugna_pacos
ENSMZEG00005004892	edc3	100	67.191	ENSVVUG00000018601	EDC3	100	67.191	Vulpes_vulpes
ENSMZEG00005004892	edc3	72	73.639	ENSXETG00000010622	edc3	99	74.785	Xenopus_tropicalis
ENSMZEG00005004892	edc3	100	89.331	ENSXMAG00000007377	edc3	100	89.331	Xiphophorus_maculatus