EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004959 (Gene tree)
Gene ID: 101471904
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 55127 bases
Position: chrLG4:7147663-7202789
Accession: 101471904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005006408	Fox-1_C	PF12414.8	1.7e-36	1	1
ENSMZEP00005006442	Fox-1_C	PF12414.8	5.3e-36	1	1
ENSMZEP00005006428	Fox-1_C	PF12414.8	6e-36	1	1
ENSMZEP00005006442	RRM_1	PF00076.22	2.3e-18	1	1
ENSMZEP00005006428	RRM_1	PF00076.22	2.5e-18	1	1
ENSMZEP00005006408	RRM_1	PF00076.22	2.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006702	-	4951	XM_004563011	ENSMZEP00005006408	463 (aa)	XP_004563068	UPI0006491BB4
ENSMZET00005006722	-	4900	XM_012922352	ENSMZEP00005006428	446 (aa)	XP_012777806	-
ENSMZET00005006737	-	4991	XM_012922354	ENSMZEP00005006442	413 (aa)	XP_012777808	-

Gene Model

Click here to download ENSMZEG00005004959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004959	-	94	55.136	ENSG00000100320	RBFOX2	99	60.800	Homo_sapiens
ENSMZEG00005004959	-	100	90.678	ENSAPOG00000021561	-	100	91.810	Acanthochromis_polyacanthus
ENSMZEG00005004959	-	100	71.064	ENSAPOG00000004877	rbfox2	100	70.450	Acanthochromis_polyacanthus
ENSMZEG00005004959	-	69	64.815	ENSAMEG00000007228	RBFOX2	94	64.120	Ailuropoda_melanoleuca
ENSMZEG00005004959	-	56	70.386	ENSACIG00000001690	rbfox2	90	64.567	Amphilophus_citrinellus
ENSMZEG00005004959	-	100	94.181	ENSAOCG00000015358	-	100	93.534	Amphiprion_ocellaris
ENSMZEG00005004959	-	100	72.708	ENSAOCG00000013752	rbfox2	100	72.103	Amphiprion_ocellaris
ENSMZEG00005004959	-	100	94.181	ENSAPEG00000013905	-	100	93.534	Amphiprion_percula
ENSMZEG00005004959	-	100	71.064	ENSAPEG00000022359	rbfox2	100	70.450	Amphiprion_percula
ENSMZEG00005004959	-	100	70.362	ENSATEG00000021951	rbfox2	100	70.450	Anabas_testudineus
ENSMZEG00005004959	-	100	93.305	ENSATEG00000009959	-	100	93.305	Anabas_testudineus
ENSMZEG00005004959	-	81	59.569	ENSAPLG00000007609	RBFOX2	91	56.793	Anas_platyrhynchos
ENSMZEG00005004959	-	91	56.061	ENSACAG00000016535	RBFOX2	96	53.493	Anolis_carolinensis
ENSMZEG00005004959	-	71	64.417	ENSANAG00000015245	RBFOX2	99	61.300	Aotus_nancymaae
ENSMZEG00005004959	-	100	69.427	ENSACLG00000009744	rbfox2	100	68.590	Astatotilapia_calliptera
ENSMZEG00005004959	-	100	100.000	ENSACLG00000017380	-	100	100.000	Astatotilapia_calliptera
ENSMZEG00005004959	-	100	70.742	ENSAMXG00000011451	rbfox2	100	70.027	Astyanax_mexicanus
ENSMZEG00005004959	-	92	55.864	ENSBTAG00000020125	RBFOX2	93	56.604	Bos_taurus
ENSMZEG00005004959	-	91	56.129	ENSCJAG00000019456	-	93	56.873	Callithrix_jacchus
ENSMZEG00005004959	-	81	59.946	ENSCJAG00000038886	-	88	57.065	Callithrix_jacchus
ENSMZEG00005004959	-	81	60.108	ENSCAFG00000001701	RBFOX2	91	57.065	Canis_familiaris
ENSMZEG00005004959	-	92	50.866	ENSCAFG00020004541	RBFOX2	96	48.690	Canis_lupus_dingo
ENSMZEG00005004959	-	92	55.914	ENSCHIG00000014027	RBFOX2	96	56.448	Capra_hircus
ENSMZEG00005004959	-	87	59.446	ENSTSYG00000014123	RBFOX2	100	55.181	Carlito_syrichta
ENSMZEG00005004959	-	78	59.172	ENSCAPG00000014308	RBFOX2	87	56.083	Cavia_aperea
ENSMZEG00005004959	-	81	59.838	ENSCPOG00000022180	RBFOX2	98	56.313	Cavia_porcellus
ENSMZEG00005004959	-	92	55.983	ENSCCAG00000036584	RBFOX2	96	53.863	Cebus_capucinus
ENSMZEG00005004959	-	92	55.965	ENSCATG00000038655	RBFOX2	97	56.934	Cercocebus_atys
ENSMZEG00005004959	-	82	59.250	ENSCLAG00000017106	RBFOX2	98	56.566	Chinchilla_lanigera
ENSMZEG00005004959	-	63	56.928	ENSCSAG00000008110	RBFOX2	86	56.325	Chlorocebus_sabaeus
ENSMZEG00005004959	-	63	57.912	ENSCHOG00000002887	RBFOX2	97	54.407	Choloepus_hoffmanni
ENSMZEG00005004959	-	81	59.838	ENSCPBG00000023144	RBFOX2	96	57.065	Chrysemys_picta_bellii
ENSMZEG00005004959	-	81	60.484	ENSCANG00000035832	RBFOX2	100	56.145	Colobus_angolensis_palliatus
ENSMZEG00005004959	-	92	55.388	ENSCGRG00001017727	Rbfox2	97	53.463	Cricetulus_griseus_chok1gshd
ENSMZEG00005004959	-	81	60.160	ENSCGRG00000014237	Rbfox2	91	57.609	Cricetulus_griseus_crigri
ENSMZEG00005004959	-	100	65.726	ENSCSEG00000007748	rbfox2	100	66.532	Cynoglossus_semilaevis
ENSMZEG00005004959	-	100	88.679	ENSCSEG00000007360	-	100	88.889	Cynoglossus_semilaevis
ENSMZEG00005004959	-	54	74.459	ENSCVAG00000004491	rbfox2	100	73.128	Cyprinodon_variegatus
ENSMZEG00005004959	-	88	79.947	ENSCVAG00000016503	-	99	79.947	Cyprinodon_variegatus
ENSMZEG00005004959	-	58	73.896	ENSDARG00000052182	rbfox2	100	73.878	Danio_rerio
ENSMZEG00005004959	-	81	59.838	ENSDNOG00000004372	RBFOX2	87	57.337	Dasypus_novemcinctus
ENSMZEG00005004959	-	81	57.951	ENSDORG00000015003	Rbfox2	96	55.707	Dipodomys_ordii
ENSMZEG00005004959	-	72	68.750	ENSETEG00000005638	RBFOX2	54	91.250	Echinops_telfairi
ENSMZEG00005004959	-	79	76.667	ENSEASG00005018920	RBFOX2	96	54.113	Equus_asinus_asinus
ENSMZEG00005004959	-	92	55.819	ENSECAG00000018923	RBFOX2	96	54.113	Equus_caballus
ENSMZEG00005004959	-	78	53.186	ENSEEUG00000004549	RBFOX2	100	49.626	Erinaceus_europaeus
ENSMZEG00005004959	-	63	66.914	ENSELUG00000000102	rbfox2	100	70.661	Esox_lucius
ENSMZEG00005004959	-	100	74.291	ENSELUG00000009404	-	100	73.511	Esox_lucius
ENSMZEG00005004959	-	92	55.224	ENSFCAG00000010061	RBFOX2	96	52.688	Felis_catus
ENSMZEG00005004959	-	81	59.838	ENSFALG00000013111	RBFOX2	90	57.065	Ficedula_albicollis
ENSMZEG00005004959	-	64	51.361	ENSFDAG00000006204	RBFOX2	57	62.000	Fukomys_damarensis
ENSMZEG00005004959	-	100	71.702	ENSFHEG00000010546	rbfox2	100	70.362	Fundulus_heteroclitus
ENSMZEG00005004959	-	90	57.921	ENSGMOG00000005278	rbfox2	100	57.143	Gadus_morhua
ENSMZEG00005004959	-	63	55.782	ENSGALG00000012540	RBFOX2	75	55.442	Gallus_gallus
ENSMZEG00005004959	-	54	74.783	ENSGAFG00000008448	rbfox2	100	73.009	Gambusia_affinis
ENSMZEG00005004959	-	51	83.478	ENSGAFG00000017428	-	95	85.217	Gambusia_affinis
ENSMZEG00005004959	-	87	68.653	ENSGACG00000007174	-	98	70.207	Gasterosteus_aculeatus
ENSMZEG00005004959	-	90	62.379	ENSGACG00000015968	rbfox2	100	61.463	Gasterosteus_aculeatus
ENSMZEG00005004959	-	81	60.108	ENSGAGG00000025884	RBFOX2	91	57.609	Gopherus_agassizii
ENSMZEG00005004959	-	92	55.699	ENSGGOG00000037332	RBFOX2	96	53.863	Gorilla_gorilla
ENSMZEG00005004959	-	100	99.568	ENSHBUG00000000856	-	100	99.568	Haplochromis_burtoni
ENSMZEG00005004959	-	100	69.427	ENSHBUG00000004356	rbfox2	100	68.590	Haplochromis_burtoni
ENSMZEG00005004959	-	94	55.000	ENSHGLG00000012907	RBFOX2	99	56.448	Heterocephalus_glaber_female
ENSMZEG00005004959	-	81	60.108	ENSHGLG00100009986	RBFOX2	91	57.609	Heterocephalus_glaber_male
ENSMZEG00005004959	-	100	69.427	ENSHCOG00000016102	rbfox2	100	67.949	Hippocampus_comes
ENSMZEG00005004959	-	100	86.266	ENSHCOG00000005662	-	100	86.481	Hippocampus_comes
ENSMZEG00005004959	-	100	69.102	ENSIPUG00000016896	rbfox2	100	69.231	Ictalurus_punctatus
ENSMZEG00005004959	-	81	60.108	ENSSTOG00000014841	RBFOX2	91	57.609	Ictidomys_tridecemlineatus
ENSMZEG00005004959	-	81	60.976	ENSJJAG00000014885	Rbfox2	91	59.350	Jaculus_jaculus
ENSMZEG00005004959	-	100	87.448	ENSKMAG00000013354	-	100	88.747	Kryptolebias_marmoratus
ENSMZEG00005004959	-	100	70.851	ENSKMAG00000021880	-	100	70.021	Kryptolebias_marmoratus
ENSMZEG00005004959	-	52	57.143	ENSLBEG00000028310	-	69	57.143	Labrus_bergylta
ENSMZEG00005004959	-	73	56.897	ENSLACG00000003339	RBFOX2	84	54.942	Latimeria_chalumnae
ENSMZEG00005004959	-	81	58.400	ENSLAFG00000027140	RBFOX2	93	56.183	Loxodonta_africana
ENSMZEG00005004959	-	92	55.965	ENSMFAG00000031994	RBFOX2	96	56.448	Macaca_fascicularis
ENSMZEG00005004959	-	81	60.753	ENSMMUG00000014010	RBFOX2	96	57.609	Macaca_mulatta
ENSMZEG00005004959	-	92	55.699	ENSMNEG00000034388	RBFOX2	97	56.627	Macaca_nemestrina
ENSMZEG00005004959	-	81	60.484	ENSMLEG00000005854	RBFOX2	100	56.145	Mandrillus_leucophaeus
ENSMZEG00005004959	-	100	72.399	ENSMAMG00000004293	rbfox2	100	72.009	Mastacembelus_armatus
ENSMZEG00005004959	-	100	87.473	ENSMAMG00000008980	-	100	90.179	Mastacembelus_armatus
ENSMZEG00005004959	-	100	71.277	ENSMZEG00005023838	rbfox2	100	70.450	Maylandia_zebra
ENSMZEG00005004959	-	87	59.446	ENSMAUG00000018816	Rbfox2	91	57.609	Mesocricetus_auratus
ENSMZEG00005004959	-	67	47.097	ENSMICG00000046341	-	82	45.092	Microcebus_murinus
ENSMZEG00005004959	-	94	55.094	ENSMICG00000035417	RBFOX2	96	53.433	Microcebus_murinus
ENSMZEG00005004959	-	81	60.108	ENSMOCG00000009327	Rbfox2	91	57.609	Microtus_ochrogaster
ENSMZEG00005004959	-	82	54.450	ENSMMOG00000008287	rbfox2	100	65.966	Mola_mola
ENSMZEG00005004959	-	81	58.442	ENSMODG00000001122	RBFOX2	93	55.118	Monodelphis_domestica
ENSMZEG00005004959	-	58	77.551	ENSMALG00000000623	rbfox2	100	76.763	Monopterus_albus
ENSMZEG00005004959	-	92	55.269	MGP_CAROLIEiJ_G0019957	Rbfox2	96	53.030	Mus_caroli
ENSMZEG00005004959	-	92	55.011	ENSMUSG00000033565	Rbfox2	98	54.313	Mus_musculus
ENSMZEG00005004959	-	91	55.411	MGP_PahariEiJ_G0019967	Rbfox2	97	53.118	Mus_pahari
ENSMZEG00005004959	-	92	55.269	MGP_SPRETEiJ_G0020860	Rbfox2	96	53.030	Mus_spretus
ENSMZEG00005004959	-	81	59.467	ENSMPUG00000012555	RBFOX2	97	55.663	Mustela_putorius_furo
ENSMZEG00005004959	-	81	58.995	ENSMLUG00000002676	RBFOX2	98	55.263	Myotis_lucifugus
ENSMZEG00005004959	-	75	59.569	ENSNGAG00000020528	Rbfox2	91	56.417	Nannospalax_galili
ENSMZEG00005004959	-	100	70.000	ENSNBRG00000018155	rbfox2	100	69.379	Neolamprologus_brichardi
ENSMZEG00005004959	-	82	99.211	ENSNBRG00000001568	-	88	99.211	Neolamprologus_brichardi
ENSMZEG00005004959	-	86	57.110	ENSNLEG00000034979	RBFOX2	100	54.503	Nomascus_leucogenys
ENSMZEG00005004959	-	81	56.533	ENSMEUG00000001547	RBFOX2	100	52.771	Notamacropus_eugenii
ENSMZEG00005004959	-	83	68.750	ENSOPRG00000014878	RBFOX2	81	58.065	Ochotona_princeps
ENSMZEG00005004959	-	92	55.128	ENSODEG00000009937	RBFOX2	98	56.313	Octodon_degus
ENSMZEG00005004959	-	87	80.798	ENSONIG00000008341	-	99	80.542	Oreochromis_niloticus
ENSMZEG00005004959	-	87	62.283	ENSONIG00000017998	rbfox2	99	60.096	Oreochromis_niloticus
ENSMZEG00005004959	-	61	57.986	ENSOANG00000007489	RBFOX2	86	57.639	Ornithorhynchus_anatinus
ENSMZEG00005004959	-	81	51.724	ENSOCUG00000001349	RBFOX2	97	48.434	Oryctolagus_cuniculus
ENSMZEG00005004959	-	100	70.064	ENSORLG00000028082	rbfox2	100	69.379	Oryzias_latipes
ENSMZEG00005004959	-	100	87.983	ENSORLG00000014948	-	100	88.412	Oryzias_latipes
ENSMZEG00005004959	-	100	90.773	ENSORLG00020005676	-	100	91.202	Oryzias_latipes_hni
ENSMZEG00005004959	-	100	69.851	ENSORLG00020008976	rbfox2	100	69.165	Oryzias_latipes_hni
ENSMZEG00005004959	-	100	90.343	ENSORLG00015000797	-	100	90.773	Oryzias_latipes_hsok
ENSMZEG00005004959	-	100	69.851	ENSORLG00015007027	rbfox2	100	69.165	Oryzias_latipes_hsok
ENSMZEG00005004959	-	100	70.426	ENSOMEG00000015966	rbfox2	100	69.593	Oryzias_melastigma
ENSMZEG00005004959	-	100	89.892	ENSOMEG00000007909	-	100	91.183	Oryzias_melastigma
ENSMZEG00005004959	-	81	59.733	ENSOGAG00000033250	RBFOX2	92	56.720	Otolemur_garnettii
ENSMZEG00005004959	-	81	58.981	ENSOARG00000018669	RBFOX2	91	54.987	Ovis_aries
ENSMZEG00005004959	-	81	60.484	ENSPPAG00000035653	RBFOX2	98	55.981	Pan_paniscus
ENSMZEG00005004959	-	92	55.437	ENSPPRG00000015635	RBFOX2	96	56.793	Panthera_pardus
ENSMZEG00005004959	-	81	59.200	ENSPTIG00000019147	RBFOX2	92	56.452	Panthera_tigris_altaica
ENSMZEG00005004959	-	92	55.699	ENSPTRG00000014305	RBFOX2	96	53.863	Pan_troglodytes
ENSMZEG00005004959	-	92	55.914	ENSPANG00000007030	RBFOX2	97	56.867	Papio_anubis
ENSMZEG00005004959	-	82	57.975	ENSPKIG00000010816	-	99	53.960	Paramormyrops_kingsleyae
ENSMZEG00005004959	-	96	69.746	ENSPKIG00000006854	-	100	64.889	Paramormyrops_kingsleyae
ENSMZEG00005004959	-	81	60.108	ENSPSIG00000017828	RBFOX2	91	57.337	Pelodiscus_sinensis
ENSMZEG00005004959	-	58	74.380	ENSPMGG00000007138	rbfox2	100	73.950	Periophthalmus_magnuspinnatus
ENSMZEG00005004959	-	68	82.394	ENSPMGG00000016969	-	85	83.099	Periophthalmus_magnuspinnatus
ENSMZEG00005004959	-	81	60.108	ENSPEMG00000012542	Rbfox2	91	57.609	Peromyscus_maniculatus_bairdii
ENSMZEG00005004959	-	81	59.946	ENSPCIG00000021550	RBFOX2	96	56.911	Phascolarctos_cinereus
ENSMZEG00005004959	-	78	87.048	ENSPFOG00000001869	-	100	88.580	Poecilia_formosa
ENSMZEG00005004959	-	100	70.276	ENSPFOG00000014209	rbfox2	100	69.658	Poecilia_formosa
ENSMZEG00005004959	-	57	75.104	ENSPLAG00000017308	rbfox2	100	73.859	Poecilia_latipinna
ENSMZEG00005004959	-	58	88.306	ENSPLAG00000002710	-	100	90.417	Poecilia_latipinna
ENSMZEG00005004959	-	58	75.510	ENSPMEG00000007320	rbfox2	100	74.689	Poecilia_mexicana
ENSMZEG00005004959	-	58	96.667	ENSPMEG00000013663	-	100	96.667	Poecilia_mexicana
ENSMZEG00005004959	-	58	73.663	ENSPREG00000012955	rbfox2	100	73.333	Poecilia_reticulata
ENSMZEG00005004959	-	92	55.699	ENSPPYG00000011766	RBFOX2	96	53.863	Pongo_abelii
ENSMZEG00005004959	-	81	56.065	ENSPCOG00000016273	RBFOX2	92	52.989	Propithecus_coquereli
ENSMZEG00005004959	-	57	64.469	ENSPVAG00000015844	RBFOX2	66	60.370	Pteropus_vampyrus
ENSMZEG00005004959	-	100	70.064	ENSPNYG00000016161	rbfox2	100	69.444	Pundamilia_nyererei
ENSMZEG00005004959	-	100	96.983	ENSPNYG00000020595	-	100	96.983	Pundamilia_nyererei
ENSMZEG00005004959	-	100	63.579	ENSPNAG00000000168	rbfox2	100	62.766	Pygocentrus_nattereri
ENSMZEG00005004959	-	99	58.150	ENSPNAG00000014196	-	100	57.522	Pygocentrus_nattereri
ENSMZEG00005004959	-	91	55.310	ENSRNOG00000004688	Rbfox2	97	56.311	Rattus_norvegicus
ENSMZEG00005004959	-	81	60.647	ENSRBIG00000033696	RBFOX2	91	58.152	Rhinopithecus_bieti
ENSMZEG00005004959	-	92	55.699	ENSRROG00000035715	RBFOX2	96	57.796	Rhinopithecus_roxellana
ENSMZEG00005004959	-	81	60.484	ENSSBOG00000028291	RBFOX2	99	56.068	Saimiri_boliviensis_boliviensis
ENSMZEG00005004959	-	91	56.738	ENSSHAG00000006835	RBFOX2	97	55.583	Sarcophilus_harrisii
ENSMZEG00005004959	-	100	67.249	ENSSFOG00015010482	-	100	71.916	Scleropages_formosus
ENSMZEG00005004959	-	59	77.959	ENSSFOG00015013291	-	77	78.838	Scleropages_formosus
ENSMZEG00005004959	-	100	72.009	ENSSMAG00000013662	rbfox2	100	71.398	Scophthalmus_maximus
ENSMZEG00005004959	-	100	89.914	ENSSMAG00000004317	-	100	90.343	Scophthalmus_maximus
ENSMZEG00005004959	-	100	94.168	ENSSDUG00000009511	-	100	93.952	Seriola_dumerili
ENSMZEG00005004959	-	100	71.702	ENSSDUG00000004292	rbfox2	100	71.092	Seriola_dumerili
ENSMZEG00005004959	-	100	89.809	ENSSLDG00000018052	-	100	91.145	Seriola_lalandi_dorsalis
ENSMZEG00005004959	-	84	71.040	ENSSLDG00000023983	rbfox2	86	71.921	Seriola_lalandi_dorsalis
ENSMZEG00005004959	-	63	57.192	ENSSPUG00000011797	RBFOX2	76	56.849	Sphenodon_punctatus
ENSMZEG00005004959	-	100	90.042	ENSSPAG00000016272	-	100	91.164	Stegastes_partitus
ENSMZEG00005004959	-	100	72.921	ENSSPAG00000013681	rbfox2	100	72.318	Stegastes_partitus
ENSMZEG00005004959	-	81	60.108	ENSSSCG00000000152	RBFOX2	96	55.718	Sus_scrofa
ENSMZEG00005004959	-	81	59.838	ENSTGUG00000010808	RBFOX2	93	57.065	Taeniopygia_guttata
ENSMZEG00005004959	-	88	66.581	ENSTRUG00000007739	-	96	65.722	Takifugu_rubripes
ENSMZEG00005004959	-	62	79.661	ENSTBEG00000003297	-	58	90.000	Tupaia_belangeri
ENSMZEG00005004959	-	81	59.733	ENSTTRG00000006922	RBFOX2	100	55.663	Tursiops_truncatus
ENSMZEG00005004959	-	78	57.967	ENSUAMG00000010612	RBFOX2	88	55.125	Ursus_americanus
ENSMZEG00005004959	-	61	57.895	ENSUMAG00000016785	RBFOX2	76	56.655	Ursus_maritimus
ENSMZEG00005004959	-	81	54.133	ENSVPAG00000002824	RBFOX2	100	51.566	Vicugna_pacos
ENSMZEG00005004959	-	81	60.108	ENSVVUG00000023561	RBFOX2	100	54.824	Vulpes_vulpes
ENSMZEG00005004959	-	77	60.169	ENSXETG00000000231	rbfox2	85	57.714	Xenopus_tropicalis
ENSMZEG00005004959	-	54	71.806	ENSXCOG00000013643	rbfox2	100	68.584	Xiphophorus_couchianus
ENSMZEG00005004959	-	66	97.674	ENSXCOG00000015905	-	84	97.674	Xiphophorus_couchianus
ENSMZEG00005004959	-	87	69.459	ENSXMAG00000029498	rbfox2	90	68.937	Xiphophorus_maculatus
ENSMZEG00005004959	-	100	86.910	ENSXMAG00000026769	-	100	87.983	Xiphophorus_maculatus