EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005004980 (Gene tree)
Gene ID: 101486156
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 8470 bases
Position: chrLG2:14224930-14233399
Accession: 101486156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005006446	PPR	PF01535.20	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005006741	-	2685	XM_004563602	ENSMZEP00005006446	665 (aa)	XP_004563659	UPI000D320F94

Gene Model

Click here to download ENSMZEG00005004980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005004980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005004980	ptcd3	90	84.013	ENSACIG00000022263	ptcd3	100	84.013	Amphilophus_citrinellus
ENSMZEG00005004980	ptcd3	100	79.129	ENSAOCG00000017186	ptcd3	98	79.129	Amphiprion_ocellaris
ENSMZEG00005004980	ptcd3	100	79.279	ENSAPEG00000016069	ptcd3	98	79.279	Amphiprion_percula
ENSMZEG00005004980	ptcd3	88	47.723	ENSAPLG00000005086	PTCD3	97	47.723	Anas_platyrhynchos
ENSMZEG00005004980	ptcd3	100	99.699	ENSACLG00000020653	ptcd3	100	99.699	Astatotilapia_calliptera
ENSMZEG00005004980	ptcd3	100	59.132	ENSAMXG00000011570	ptcd3	100	59.132	Astyanax_mexicanus
ENSMZEG00005004980	ptcd3	98	78.779	ENSCVAG00000020820	ptcd3	98	80.532	Cyprinodon_variegatus
ENSMZEG00005004980	ptcd3	85	73.944	ENSGAFG00000015291	ptcd3	94	74.120	Gambusia_affinis
ENSMZEG00005004980	ptcd3	100	99.699	ENSHBUG00000020056	ptcd3	100	99.699	Haplochromis_burtoni
ENSMZEG00005004980	ptcd3	99	75.639	ENSLBEG00000015349	ptcd3	99	75.639	Labrus_bergylta
ENSMZEG00005004980	ptcd3	91	45.219	ENSMGAG00000013124	PTCD3	99	45.760	Meleagris_gallopavo
ENSMZEG00005004980	ptcd3	100	76.347	ENSMALG00000013282	ptcd3	100	76.347	Monopterus_albus
ENSMZEG00005004980	ptcd3	90	89.112	ENSNBRG00000000447	ptcd3	100	89.112	Neolamprologus_brichardi
ENSMZEG00005004980	ptcd3	100	97.143	ENSONIG00000015886	ptcd3	100	97.143	Oreochromis_niloticus
ENSMZEG00005004980	ptcd3	100	78.346	ENSORLG00000008776	ptcd3	100	79.294	Oryzias_latipes
ENSMZEG00005004980	ptcd3	99	78.163	ENSORLG00020020676	ptcd3	99	78.947	Oryzias_latipes_hni
ENSMZEG00005004980	ptcd3	87	63.516	ENSORLG00015015978	ptcd3	99	64.511	Oryzias_latipes_hsok
ENSMZEG00005004980	ptcd3	98	74.540	ENSPFOG00000004442	ptcd3	100	74.540	Poecilia_formosa
ENSMZEG00005004980	ptcd3	90	75.200	ENSPLAG00000021401	ptcd3	100	75.200	Poecilia_latipinna
ENSMZEG00005004980	ptcd3	88	73.038	ENSPMEG00000007153	ptcd3	100	73.038	Poecilia_mexicana
ENSMZEG00005004980	ptcd3	99	55.096	ENSSFOG00015019643	ptcd3	99	55.096	Scleropages_formosus
ENSMZEG00005004980	ptcd3	80	52.319	ENSTGUG00000010760	PTCD3	100	52.319	Taeniopygia_guttata
ENSMZEG00005004980	ptcd3	100	64.970	ENSTRUG00000003939	ptcd3	100	64.970	Takifugu_rubripes