EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005162 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 107952 bases
Position: chrLG3:30036965-30144916
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005006709	zf-C2H2	PF00096.26	8.9e-26	1	4
ENSMZEP00005006709	zf-C2H2	PF00096.26	8.9e-26	2	4
ENSMZEP00005006709	zf-C2H2	PF00096.26	8.9e-26	3	4
ENSMZEP00005006709	zf-C2H2	PF00096.26	8.9e-26	4	4
ENSMZEP00005006709	zf-met	PF12874.7	2.4e-13	1	2
ENSMZEP00005006709	zf-met	PF12874.7	2.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007008	-	843	-	ENSMZEP00005006709	280 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005005162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005162	-	77	38.547	ENSACIG00000000360	si:ch211-241b2.1	87	38.547	Amphilophus_citrinellus
ENSMZEG00005005162	-	71	46.018	ENSACIG00000007882	-	78	46.018	Amphilophus_citrinellus
ENSMZEG00005005162	-	79	47.619	ENSACIG00000008886	znf1164	85	47.619	Amphilophus_citrinellus
ENSMZEG00005005162	-	74	41.667	ENSATEG00000008667	-	55	41.667	Anabas_testudineus
ENSMZEG00005005162	-	78	40.476	ENSATEG00000008683	si:ch211-241b2.1	79	36.404	Anabas_testudineus
ENSMZEG00005005162	-	67	44.860	ENSACLG00000024670	-	63	44.860	Astatotilapia_calliptera
ENSMZEG00005005162	-	67	63.415	ENSACLG00000000521	-	100	63.415	Astatotilapia_calliptera
ENSMZEG00005005162	-	80	54.128	ENSACLG00000017449	-	58	54.128	Astatotilapia_calliptera
ENSMZEG00005005162	-	75	42.929	ENSAMXG00000043291	-	77	42.929	Astyanax_mexicanus
ENSMZEG00005005162	-	82	34.921	ENSAMXG00000029660	-	62	34.921	Astyanax_mexicanus
ENSMZEG00005005162	-	80	49.558	ENSAMXG00000041650	-	85	39.759	Astyanax_mexicanus
ENSMZEG00005005162	-	70	37.805	ENSCSEG00000015585	-	74	37.805	Cynoglossus_semilaevis
ENSMZEG00005005162	-	69	42.211	ENSDARG00000102678	znf1181	75	42.211	Danio_rerio
ENSMZEG00005005162	-	80	43.023	ENSDARG00000115326	znf1002	73	43.023	Danio_rerio
ENSMZEG00005005162	-	90	50.862	ENSDARG00000111614	znf1183	81	50.862	Danio_rerio
ENSMZEG00005005162	-	76	41.206	ENSDARG00000053165	zgc:113377	86	41.489	Danio_rerio
ENSMZEG00005005162	-	72	43.443	ENSDARG00000071790	znf1153	77	43.443	Danio_rerio
ENSMZEG00005005162	-	76	50.649	ENSDARG00000071833	znf1162	87	45.161	Danio_rerio
ENSMZEG00005005162	-	79	39.869	ENSDARG00000104065	znf1154	88	38.384	Danio_rerio
ENSMZEG00005005162	-	80	41.758	ENSDARG00000092605	znf1003	70	37.131	Danio_rerio
ENSMZEG00005005162	-	85	41.176	ENSDARG00000099890	CU207221.2	99	41.176	Danio_rerio
ENSMZEG00005005162	-	78	42.105	ENSDARG00000111899	zgc:171435	69	42.105	Danio_rerio
ENSMZEG00005005162	-	76	42.781	ENSDARG00000101044	si:ch73-138e16.6	82	42.781	Danio_rerio
ENSMZEG00005005162	-	70	40.796	ENSDARG00000100803	zgc:173517	91	40.796	Danio_rerio
ENSMZEG00005005162	-	79	39.153	ENSDARG00000105056	znf45l	90	46.914	Danio_rerio
ENSMZEG00005005162	-	70	43.085	ENSDARG00000109703	FO834825.1	81	43.085	Danio_rerio
ENSMZEG00005005162	-	76	47.619	ENSDARG00000094736	znf1157	87	41.500	Danio_rerio
ENSMZEG00005005162	-	71	47.619	ENSDARG00000078814	si:dkey-34m19.3	79	41.176	Danio_rerio
ENSMZEG00005005162	-	80	48.718	ENSDARG00000088507	znf982	75	48.718	Danio_rerio
ENSMZEG00005005162	-	70	42.714	ENSDARG00000116765	zgc:162962	87	40.976	Danio_rerio
ENSMZEG00005005162	-	80	41.294	ENSDARG00000098248	CABZ01081730.1	90	46.032	Danio_rerio
ENSMZEG00005005162	-	67	40.952	ENSDARG00000098613	si:dkey-15h8.16	77	40.952	Danio_rerio
ENSMZEG00005005162	-	84	47.273	ENSDARG00000102401	znf1001	93	47.273	Danio_rerio
ENSMZEG00005005162	-	84	47.273	ENSDARG00000115857	znf1001	93	47.273	Danio_rerio
ENSMZEG00005005162	-	77	43.810	ENSDARG00000100361	znf1174	72	43.810	Danio_rerio
ENSMZEG00005005162	-	81	43.662	ENSDARG00000078159	zgc:175284	89	43.662	Danio_rerio
ENSMZEG00005005162	-	83	39.320	ENSDARG00000105073	CU655961.2	85	49.091	Danio_rerio
ENSMZEG00005005162	-	86	41.627	ENSDARG00000099731	CABZ01066719.1	95	41.799	Danio_rerio
ENSMZEG00005005162	-	80	43.750	ENSDARG00000097521	si:dkey-111k8.5	83	43.750	Danio_rerio
ENSMZEG00005005162	-	80	45.455	ENSDARG00000113011	zgc:113102	83	50.617	Danio_rerio
ENSMZEG00005005162	-	69	45.238	ENSDARG00000101694	znf1184	81	45.238	Danio_rerio
ENSMZEG00005005162	-	81	39.899	ENSEBUG00000015073	-	83	39.899	Eptatretus_burgeri
ENSMZEG00005005162	-	70	42.991	ENSFHEG00000018009	-	52	39.394	Fundulus_heteroclitus
ENSMZEG00005005162	-	70	46.847	ENSFHEG00000018209	-	67	46.847	Fundulus_heteroclitus
ENSMZEG00005005162	-	76	37.681	ENSFHEG00000014023	-	54	37.410	Fundulus_heteroclitus
ENSMZEG00005005162	-	80	34.673	ENSFHEG00000013152	-	62	34.673	Fundulus_heteroclitus
ENSMZEG00005005162	-	67	45.000	ENSHBUG00000018916	-	59	44.304	Haplochromis_burtoni
ENSMZEG00005005162	-	67	47.541	ENSKMAG00000009563	-	66	47.541	Kryptolebias_marmoratus
ENSMZEG00005005162	-	54	36.364	ENSKMAG00000014629	-	53	34.409	Kryptolebias_marmoratus
ENSMZEG00005005162	-	74	36.224	ENSLBEG00000028628	znf1174	52	36.224	Labrus_bergylta
ENSMZEG00005005162	-	83	34.112	ENSMAMG00000014743	-	51	34.112	Mastacembelus_armatus
ENSMZEG00005005162	-	80	46.781	ENSMZEG00005021426	-	71	71.053	Maylandia_zebra
ENSMZEG00005005162	-	74	41.975	ENSMZEG00005026470	-	55	45.690	Maylandia_zebra
ENSMZEG00005005162	-	67	42.373	ENSMZEG00005007426	-	57	42.373	Maylandia_zebra
ENSMZEG00005005162	-	82	52.727	ENSMZEG00005025568	-	79	52.727	Maylandia_zebra
ENSMZEG00005005162	-	73	36.683	ENSMZEG00005025729	-	95	36.683	Maylandia_zebra
ENSMZEG00005005162	-	76	45.283	ENSMZEG00005027793	-	72	45.714	Maylandia_zebra
ENSMZEG00005005162	-	82	48.980	ENSMZEG00005027943	-	86	45.763	Maylandia_zebra
ENSMZEG00005005162	-	82	52.941	ENSMZEG00005022161	-	89	49.045	Maylandia_zebra
ENSMZEG00005005162	-	70	38.942	ENSMALG00000018074	-	58	38.942	Monopterus_albus
ENSMZEG00005005162	-	66	35.714	ENSMALG00000008638	-	54	36.441	Monopterus_albus
ENSMZEG00005005162	-	80	45.679	ENSNBRG00000000577	-	73	45.679	Neolamprologus_brichardi
ENSMZEG00005005162	-	76	54.867	ENSONIG00000013908	-	99	54.867	Oreochromis_niloticus
ENSMZEG00005005162	-	87	80.645	ENSONIG00000003363	-	100	80.645	Oreochromis_niloticus
ENSMZEG00005005162	-	88	100.000	ENSONIG00000006585	-	100	100.000	Oreochromis_niloticus
ENSMZEG00005005162	-	58	46.914	ENSORLG00020019341	-	75	53.125	Oryzias_latipes_hni
ENSMZEG00005005162	-	73	36.702	ENSPKIG00000020324	-	50	36.702	Paramormyrops_kingsleyae
ENSMZEG00005005162	-	66	36.364	ENSPMGG00000001558	znf1174	64	36.364	Periophthalmus_magnuspinnatus
ENSMZEG00005005162	-	80	38.095	ENSPFOG00000001144	-	100	38.942	Poecilia_formosa
ENSMZEG00005005162	-	70	46.667	ENSPFOG00000011766	-	97	43.810	Poecilia_formosa
ENSMZEG00005005162	-	92	33.043	ENSPLAG00000016561	zgc:113348	89	36.264	Poecilia_latipinna
ENSMZEG00005005162	-	71	41.089	ENSPMEG00000007573	zgc:113343	62	41.089	Poecilia_mexicana
ENSMZEG00005005162	-	71	45.370	ENSPREG00000014105	-	83	45.370	Poecilia_reticulata
ENSMZEG00005005162	-	71	42.408	ENSPREG00000001514	zgc:113343	60	42.408	Poecilia_reticulata
ENSMZEG00005005162	-	74	37.107	ENSPREG00000005538	-	77	37.107	Poecilia_reticulata
ENSMZEG00005005162	-	82	54.955	ENSPNYG00000024183	zgc:173577	97	54.955	Pundamilia_nyererei
ENSMZEG00005005162	-	56	43.590	ENSSDUG00000008682	-	72	43.590	Seriola_dumerili
ENSMZEG00005005162	-	71	41.667	ENSSPAG00000006539	-	89	37.162	Stegastes_partitus
ENSMZEG00005005162	-	66	31.515	ENSSPAG00000009426	-	58	31.515	Stegastes_partitus
ENSMZEG00005005162	-	81	35.676	ENSSPAG00000013109	si:ch211-241b2.1	71	36.585	Stegastes_partitus
ENSMZEG00005005162	-	78	35.897	ENSTNIG00000000277	-	92	35.897	Tetraodon_nigroviridis
ENSMZEG00005005162	-	71	40.099	ENSXCOG00000017871	zgc:113343	65	40.099	Xiphophorus_couchianus
ENSMZEG00005005162	-	71	40.099	ENSXMAG00000019923	zgc:113343	63	40.099	Xiphophorus_maculatus