EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005203 (Gene tree)
Gene ID: 101479978
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 18542 bases
Position: chrLG12:20651583-20670124
Accession: 101479978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005006746	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007046	-	7438	XM_004547240	ENSMZEP00005006746	1021 (aa)	XP_004547297	UPI0003298033

Gene Model

Click here to download ENSMZEG00005005203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005203	smarcad1a	100	49.817	ENSG00000163104	SMARCAD1	100	67.114	Homo_sapiens
ENSMZEG00005005203	smarcad1a	100	77.820	ENSAPOG00000011446	smarcad1a	100	77.392	Acanthochromis_polyacanthus
ENSMZEG00005005203	smarcad1a	100	49.727	ENSAMEG00000005844	SMARCAD1	92	66.459	Ailuropoda_melanoleuca
ENSMZEG00005005203	smarcad1a	72	92.331	ENSACIG00000018326	smarcad1a	97	92.331	Amphilophus_citrinellus
ENSMZEG00005005203	smarcad1a	100	78.216	ENSAOCG00000019762	smarcad1a	100	78.257	Amphiprion_ocellaris
ENSMZEG00005005203	smarcad1a	100	78.216	ENSAPEG00000003889	smarcad1a	100	78.257	Amphiprion_percula
ENSMZEG00005005203	smarcad1a	95	77.525	ENSATEG00000015608	smarcad1a	99	78.119	Anabas_testudineus
ENSMZEG00005005203	smarcad1a	80	67.601	ENSAPLG00000004630	SMARCAD1	90	62.707	Anas_platyrhynchos
ENSMZEG00005005203	smarcad1a	79	66.199	ENSACAG00000013554	SMARCAD1	95	63.006	Anolis_carolinensis
ENSMZEG00005005203	smarcad1a	100	49.635	ENSANAG00000020488	SMARCAD1	98	62.181	Aotus_nancymaae
ENSMZEG00005005203	smarcad1a	100	99.902	ENSACLG00000017063	smarcad1a	100	99.902	Astatotilapia_calliptera
ENSMZEG00005005203	smarcad1a	64	71.214	ENSAMXG00000015470	smarcad1a	94	71.214	Astyanax_mexicanus
ENSMZEG00005005203	smarcad1a	84	63.170	ENSAMXG00000019130	smarcad1b	94	60.808	Astyanax_mexicanus
ENSMZEG00005005203	smarcad1a	100	49.316	ENSBTAG00000017061	SMARCAD1	98	62.074	Bos_taurus
ENSMZEG00005005203	smarcad1a	61	41.509	WBGene00010845	M03C11.8	74	39.276	Caenorhabditis_elegans
ENSMZEG00005005203	smarcad1a	100	49.771	ENSCJAG00000006778	SMARCAD1	98	62.500	Callithrix_jacchus
ENSMZEG00005005203	smarcad1a	100	49.818	ENSCAFG00000010026	SMARCAD1	92	66.615	Canis_familiaris
ENSMZEG00005005203	smarcad1a	91	54.362	ENSCAFG00020003994	SMARCAD1	96	62.536	Canis_lupus_dingo
ENSMZEG00005005203	smarcad1a	100	49.589	ENSCHIG00000012905	SMARCAD1	98	62.358	Capra_hircus
ENSMZEG00005005203	smarcad1a	100	50.137	ENSTSYG00000002706	SMARCAD1	97	63.165	Carlito_syrichta
ENSMZEG00005005203	smarcad1a	93	47.435	ENSCAPG00000016744	SMARCAD1	90	56.278	Cavia_aperea
ENSMZEG00005005203	smarcad1a	100	49.773	ENSCPOG00000011398	SMARCAD1	92	66.615	Cavia_porcellus
ENSMZEG00005005203	smarcad1a	100	49.817	ENSCCAG00000022264	SMARCAD1	100	67.114	Cebus_capucinus
ENSMZEG00005005203	smarcad1a	100	49.589	ENSCATG00000035663	SMARCAD1	98	63.231	Cercocebus_atys
ENSMZEG00005005203	smarcad1a	87	55.039	ENSCSAG00000004186	SMARCAD1	98	62.500	Chlorocebus_sabaeus
ENSMZEG00005005203	smarcad1a	100	50.227	ENSCPBG00000013203	SMARCAD1	100	50.182	Chrysemys_picta_bellii
ENSMZEG00005005203	smarcad1a	64	49.094	ENSCING00000001688	-	98	49.094	Ciona_intestinalis
ENSMZEG00005005203	smarcad1a	100	49.589	ENSCANG00000003556	SMARCAD1	100	67.114	Colobus_angolensis_palliatus
ENSMZEG00005005203	smarcad1a	100	69.888	ENSCSEG00000017903	smarcad1a	100	69.153	Cynoglossus_semilaevis
ENSMZEG00005005203	smarcad1a	100	68.988	ENSCSEG00000014419	-	100	68.299	Cynoglossus_semilaevis
ENSMZEG00005005203	smarcad1a	64	75.422	ENSDARG00000073721	smarcad1b	85	63.647	Danio_rerio
ENSMZEG00005005203	smarcad1a	100	49.634	ENSDNOG00000000806	-	98	62.536	Dasypus_novemcinctus
ENSMZEG00005005203	smarcad1a	99	62.393	ENSDORG00000012331	Smarcad1	98	62.393	Dipodomys_ordii
ENSMZEG00005005203	smarcad1a	63	44.801	FBgn0032157	Etl1	77	44.745	Drosophila_melanogaster
ENSMZEG00005005203	smarcad1a	61	48.903	ENSEBUG00000003969	smarcad1a	97	48.485	Eptatretus_burgeri
ENSMZEG00005005203	smarcad1a	100	49.772	ENSEASG00005012382	SMARCAD1	92	66.459	Equus_asinus_asinus
ENSMZEG00005005203	smarcad1a	100	49.772	ENSECAG00000011562	SMARCAD1	92	66.459	Equus_caballus
ENSMZEG00005005203	smarcad1a	100	67.117	ENSELUG00000018535	smarcad1a	100	66.988	Esox_lucius
ENSMZEG00005005203	smarcad1a	84	61.700	ENSELUG00000019154	smarcad1b	83	61.700	Esox_lucius
ENSMZEG00005005203	smarcad1a	100	49.634	ENSFCAG00000003958	SMARCAD1	100	67.114	Felis_catus
ENSMZEG00005005203	smarcad1a	100	50.230	ENSFALG00000006089	SMARCAD1	66	66.226	Ficedula_albicollis
ENSMZEG00005005203	smarcad1a	100	49.361	ENSFDAG00000017027	SMARCAD1	92	66.615	Fukomys_damarensis
ENSMZEG00005005203	smarcad1a	100	68.232	ENSFHEG00000012778	smarcad1a	65	80.878	Fundulus_heteroclitus
ENSMZEG00005005203	smarcad1a	90	75.933	ENSGMOG00000018995	smarcad1a	97	81.429	Gadus_morhua
ENSMZEG00005005203	smarcad1a	81	56.295	ENSGALG00000037339	SMARCAD1	91	63.519	Gallus_gallus
ENSMZEG00005005203	smarcad1a	100	67.185	ENSGAFG00000013498	smarcad1a	100	66.728	Gambusia_affinis
ENSMZEG00005005203	smarcad1a	91	83.776	ENSGACG00000007327	smarcad1a	99	83.776	Gasterosteus_aculeatus
ENSMZEG00005005203	smarcad1a	91	55.911	ENSGAGG00000008582	SMARCAD1	100	50.319	Gopherus_agassizii
ENSMZEG00005005203	smarcad1a	100	49.817	ENSGGOG00000023001	SMARCAD1	98	62.500	Gorilla_gorilla
ENSMZEG00005005203	smarcad1a	100	96.106	ENSHBUG00000011042	smarcad1a	100	96.106	Haplochromis_burtoni
ENSMZEG00005005203	smarcad1a	90	54.780	ENSHGLG00000005070	SMARCAD1	76	66.615	Heterocephalus_glaber_female
ENSMZEG00005005203	smarcad1a	90	54.780	ENSHGLG00100006812	SMARCAD1	76	66.615	Heterocephalus_glaber_male
ENSMZEG00005005203	smarcad1a	100	61.394	ENSHCOG00000007848	smarcad1a	100	60.573	Hippocampus_comes
ENSMZEG00005005203	smarcad1a	64	74.080	ENSIPUG00000022817	smarcad1b	74	71.199	Ictalurus_punctatus
ENSMZEG00005005203	smarcad1a	99	57.007	ENSIPUG00000000242	smarcad1a	96	60.911	Ictalurus_punctatus
ENSMZEG00005005203	smarcad1a	100	50.228	ENSSTOG00000001227	SMARCAD1	92	66.147	Ictidomys_tridecemlineatus
ENSMZEG00005005203	smarcad1a	100	49.954	ENSJJAG00000022342	Smarcad1	92	66.303	Jaculus_jaculus
ENSMZEG00005005203	smarcad1a	99	73.004	ENSKMAG00000021351	smarcad1a	99	73.099	Kryptolebias_marmoratus
ENSMZEG00005005203	smarcad1a	100	73.062	ENSLBEG00000008088	smarcad1a	99	72.864	Labrus_bergylta
ENSMZEG00005005203	smarcad1a	87	74.501	ENSLOCG00000012909	smarcad1a	99	70.490	Lepisosteus_oculatus
ENSMZEG00005005203	smarcad1a	100	49.132	ENSLAFG00000000040	SMARCAD1	92	65.055	Loxodonta_africana
ENSMZEG00005005203	smarcad1a	100	49.498	ENSMFAG00000042606	SMARCAD1	98	62.500	Macaca_fascicularis
ENSMZEG00005005203	smarcad1a	90	54.780	ENSMMUG00000022242	SMARCAD1	96	62.500	Macaca_mulatta
ENSMZEG00005005203	smarcad1a	100	49.498	ENSMNEG00000038117	SMARCAD1	100	67.114	Macaca_nemestrina
ENSMZEG00005005203	smarcad1a	100	49.589	ENSMLEG00000038333	SMARCAD1	100	67.114	Mandrillus_leucophaeus
ENSMZEG00005005203	smarcad1a	100	78.281	ENSMAMG00000000933	smarcad1a	100	77.432	Mastacembelus_armatus
ENSMZEG00005005203	smarcad1a	85	64.937	ENSMGAG00000005577	SMARCAD1	87	64.937	Meleagris_gallopavo
ENSMZEG00005005203	smarcad1a	100	49.266	ENSMAUG00000008417	Smarcad1	63	66.303	Mesocricetus_auratus
ENSMZEG00005005203	smarcad1a	100	49.954	ENSMICG00000009746	SMARCAD1	100	49.817	Microcebus_murinus
ENSMZEG00005005203	smarcad1a	100	49.358	ENSMOCG00000017142	Smarcad1	92	66.459	Microtus_ochrogaster
ENSMZEG00005005203	smarcad1a	75	87.372	ENSMMOG00000000275	smarcad1a	100	85.355	Mola_mola
ENSMZEG00005005203	smarcad1a	91	54.952	ENSMODG00000019268	SMARCAD1	76	67.395	Monodelphis_domestica
ENSMZEG00005005203	smarcad1a	83	66.147	MGP_CAROLIEiJ_G0028458	-	61	66.147	Mus_caroli
ENSMZEG00005005203	smarcad1a	62	66.147	ENSMUSG00000029920	Smarcad1	63	66.147	Mus_musculus
ENSMZEG00005005203	smarcad1a	62	66.147	MGP_PahariEiJ_G0022198	Smarcad1	63	66.147	Mus_pahari
ENSMZEG00005005203	smarcad1a	62	66.147	MGP_SPRETEiJ_G0029462	Smarcad1	63	66.147	Mus_spretus
ENSMZEG00005005203	smarcad1a	100	49.727	ENSMPUG00000002111	SMARCAD1	92	66.459	Mustela_putorius_furo
ENSMZEG00005005203	smarcad1a	100	49.727	ENSMLUG00000000425	SMARCAD1	92	66.252	Myotis_lucifugus
ENSMZEG00005005203	smarcad1a	100	49.631	ENSNGAG00000000810	Smarcad1	63	65.991	Nannospalax_galili
ENSMZEG00005005203	smarcad1a	76	91.985	ENSNBRG00000012749	smarcad1a	97	91.985	Neolamprologus_brichardi
ENSMZEG00005005203	smarcad1a	100	49.817	ENSNLEG00000014225	SMARCAD1	100	67.114	Nomascus_leucogenys
ENSMZEG00005005203	smarcad1a	100	50.366	ENSODEG00000004334	SMARCAD1	92	66.615	Octodon_degus
ENSMZEG00005005203	smarcad1a	95	95.944	ENSONIG00000015059	smarcad1a	100	91.412	Oreochromis_niloticus
ENSMZEG00005005203	smarcad1a	74	68.429	ENSOANG00000013764	SMARCAD1	94	64.986	Ornithorhynchus_anatinus
ENSMZEG00005005203	smarcad1a	99	62.216	ENSOCUG00000017283	SMARCAD1	98	62.216	Oryctolagus_cuniculus
ENSMZEG00005005203	smarcad1a	100	70.367	ENSORLG00000004869	smarcad1a	100	70.699	Oryzias_latipes
ENSMZEG00005005203	smarcad1a	100	70.273	ENSORLG00020020569	smarcad1a	100	70.605	Oryzias_latipes_hni
ENSMZEG00005005203	smarcad1a	100	70.179	ENSORLG00015009045	smarcad1a	100	70.510	Oryzias_latipes_hsok
ENSMZEG00005005203	smarcad1a	99	70.332	ENSOMEG00000023032	smarcad1a	100	70.190	Oryzias_melastigma
ENSMZEG00005005203	smarcad1a	100	49.177	ENSOGAG00000011444	SMARCAD1	63	66.096	Otolemur_garnettii
ENSMZEG00005005203	smarcad1a	100	49.680	ENSOARG00000017851	SMARCAD1	98	62.358	Ovis_aries
ENSMZEG00005005203	smarcad1a	100	49.817	ENSPPAG00000035715	SMARCAD1	98	62.500	Pan_paniscus
ENSMZEG00005005203	smarcad1a	100	49.496	ENSPPRG00000024756	SMARCAD1	100	67.114	Panthera_pardus
ENSMZEG00005005203	smarcad1a	100	49.405	ENSPTIG00000017868	SMARCAD1	92	66.407	Panthera_tigris_altaica
ENSMZEG00005005203	smarcad1a	100	49.817	ENSPTRG00000023126	SMARCAD1	100	67.114	Pan_troglodytes
ENSMZEG00005005203	smarcad1a	100	48.907	ENSPANG00000019757	SMARCAD1	98	62.480	Papio_anubis
ENSMZEG00005005203	smarcad1a	90	56.142	ENSPSIG00000010255	SMARCAD1	79	64.791	Pelodiscus_sinensis
ENSMZEG00005005203	smarcad1a	63	78.261	ENSPMGG00000010735	smarcad1a	97	76.686	Periophthalmus_magnuspinnatus
ENSMZEG00005005203	smarcad1a	100	44.972	ENSPEMG00000001854	Smarcad1	100	44.929	Peromyscus_maniculatus_bairdii
ENSMZEG00005005203	smarcad1a	99	45.155	ENSPMAG00000003516	smarcad1a	94	57.413	Petromyzon_marinus
ENSMZEG00005005203	smarcad1a	82	57.412	ENSPCIG00000008137	SMARCAD1	97	56.941	Phascolarctos_cinereus
ENSMZEG00005005203	smarcad1a	100	69.863	ENSPFOG00000019116	smarcad1a	100	68.033	Poecilia_formosa
ENSMZEG00005005203	smarcad1a	100	69.818	ENSPLAG00000000108	smarcad1a	100	67.996	Poecilia_latipinna
ENSMZEG00005005203	smarcad1a	100	69.772	ENSPMEG00000009155	smarcad1a	100	67.942	Poecilia_mexicana
ENSMZEG00005005203	smarcad1a	100	72.185	ENSPREG00000018185	smarcad1a	100	71.604	Poecilia_reticulata
ENSMZEG00005005203	smarcad1a	100	49.771	ENSPPYG00000014935	SMARCAD1	98	62.040	Pongo_abelii
ENSMZEG00005005203	smarcad1a	51	64.449	ENSPCOG00000020478	SMARCAD1	62	64.449	Propithecus_coquereli
ENSMZEG00005005203	smarcad1a	100	59.808	ENSPVAG00000001760	SMARCAD1	98	61.506	Pteropus_vampyrus
ENSMZEG00005005203	smarcad1a	76	93.665	ENSPNYG00000010087	smarcad1a	97	93.665	Pundamilia_nyererei
ENSMZEG00005005203	smarcad1a	85	63.333	ENSPNAG00000010099	smarcad1b	88	63.261	Pygocentrus_nattereri
ENSMZEG00005005203	smarcad1a	100	58.052	ENSPNAG00000001663	smarcad1a	100	57.529	Pygocentrus_nattereri
ENSMZEG00005005203	smarcad1a	62	66.459	ENSRNOG00000006391	Smarcad1	63	66.459	Rattus_norvegicus
ENSMZEG00005005203	smarcad1a	100	49.771	ENSRBIG00000041989	SMARCAD1	98	62.500	Rhinopithecus_bieti
ENSMZEG00005005203	smarcad1a	100	49.771	ENSRROG00000035309	SMARCAD1	98	62.500	Rhinopithecus_roxellana
ENSMZEG00005005203	smarcad1a	100	49.817	ENSSBOG00000032114	SMARCAD1	100	67.114	Saimiri_boliviensis_boliviensis
ENSMZEG00005005203	smarcad1a	100	50.549	ENSSHAG00000001279	SMARCAD1	91	67.707	Sarcophilus_harrisii
ENSMZEG00005005203	smarcad1a	100	60.574	ENSSFOG00015016814	smarcad1b	100	59.564	Scleropages_formosus
ENSMZEG00005005203	smarcad1a	69	70.490	ENSSFOG00015020909	smarcad1a	94	70.490	Scleropages_formosus
ENSMZEG00005005203	smarcad1a	100	76.816	ENSSMAG00000001326	smarcad1a	100	76.909	Scophthalmus_maximus
ENSMZEG00005005203	smarcad1a	77	81.039	ENSSDUG00000022338	smarcad1a	99	80.599	Seriola_dumerili
ENSMZEG00005005203	smarcad1a	100	76.217	ENSSLDG00000024986	smarcad1a	100	77.465	Seriola_lalandi_dorsalis
ENSMZEG00005005203	smarcad1a	58	68.908	ENSSPUG00000004633	SMARCAD1	99	68.908	Sphenodon_punctatus
ENSMZEG00005005203	smarcad1a	100	77.840	ENSSPAG00000001970	smarcad1a	100	77.601	Stegastes_partitus
ENSMZEG00005005203	smarcad1a	100	49.863	ENSSSCG00000009193	SMARCAD1	97	62.393	Sus_scrofa
ENSMZEG00005005203	smarcad1a	77	63.418	ENSTGUG00000003127	SMARCAD1	96	63.803	Taeniopygia_guttata
ENSMZEG00005005203	smarcad1a	71	82.265	ENSTNIG00000017585	smarcad1a	99	75.351	Tetraodon_nigroviridis
ENSMZEG00005005203	smarcad1a	76	69.444	ENSTBEG00000002789	SMARCAD1	82	69.444	Tupaia_belangeri
ENSMZEG00005005203	smarcad1a	90	54.506	ENSTTRG00000000226	SMARCAD1	83	63.028	Tursiops_truncatus
ENSMZEG00005005203	smarcad1a	100	49.727	ENSUAMG00000022262	SMARCAD1	92	66.459	Ursus_americanus
ENSMZEG00005005203	smarcad1a	100	49.636	ENSUMAG00000004549	SMARCAD1	92	66.459	Ursus_maritimus
ENSMZEG00005005203	smarcad1a	100	60.548	ENSVVUG00000007271	SMARCAD1	97	62.393	Vulpes_vulpes
ENSMZEG00005005203	smarcad1a	90	51.233	ENSXETG00000019214	smarcad1	100	51.025	Xenopus_tropicalis
ENSMZEG00005005203	smarcad1a	82	82.815	ENSXCOG00000005232	smarcad1a	88	82.815	Xiphophorus_couchianus
ENSMZEG00005005203	smarcad1a	100	69.561	ENSXMAG00000015350	smarcad1a	100	68.676	Xiphophorus_maculatus