EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005435 (Gene tree)
Gene ID: 101480439
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 1716 bases
Position: chrAGTA05000027.1:906045-907760
Accession: 101480439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007062	RRM_1	PF00076.22	5.6e-23	1	2
ENSMZEP00005007062	RRM_1	PF00076.22	5.6e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007370	-	1716	XM_004541372	ENSMZEP00005007062	571 (aa)	XP_004541429	UPI000329958F

Gene Model

Click here to download ENSMZEG00005005435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005435	zgc:153215	79	44.048	ENSG00000183808	RBM12B	98	45.000	Homo_sapiens
ENSMZEG00005005435	zgc:153215	80	76.000	ENSAPOG00000008836	zgc:153215	95	76.000	Acanthochromis_polyacanthus
ENSMZEG00005005435	zgc:153215	78	48.810	ENSAPOG00000013963	rbm12b	74	48.810	Acanthochromis_polyacanthus
ENSMZEG00005005435	zgc:153215	79	47.727	ENSACIG00000014943	rbm12b	98	47.727	Amphilophus_citrinellus
ENSMZEG00005005435	zgc:153215	99	66.312	ENSACIG00000013317	zgc:153215	99	66.312	Amphilophus_citrinellus
ENSMZEG00005005435	zgc:153215	81	42.202	ENSAOCG00000024270	rbm12b	74	42.202	Amphiprion_ocellaris
ENSMZEG00005005435	zgc:153215	100	49.653	ENSAOCG00000010819	zgc:153215	99	51.652	Amphiprion_ocellaris
ENSMZEG00005005435	zgc:153215	81	42.202	ENSAPEG00000022079	rbm12b	99	42.202	Amphiprion_percula
ENSMZEG00005005435	zgc:153215	100	58.191	ENSATEG00000001886	zgc:153215	99	58.191	Anabas_testudineus
ENSMZEG00005005435	zgc:153215	100	87.566	ENSACLG00000007675	zgc:153215	100	87.566	Astatotilapia_calliptera
ENSMZEG00005005435	zgc:153215	79	46.591	ENSACLG00000005575	rbm12b	72	46.591	Astatotilapia_calliptera
ENSMZEG00005005435	zgc:153215	59	38.346	ENSACLG00000005578	rbm12b	57	38.346	Astatotilapia_calliptera
ENSMZEG00005005435	zgc:153215	95	38.043	ENSAMXG00000020853	zgc:153215	99	34.429	Astyanax_mexicanus
ENSMZEG00005005435	zgc:153215	76	41.972	ENSCSEG00000001575	-	99	41.972	Cynoglossus_semilaevis
ENSMZEG00005005435	zgc:153215	78	45.455	ENSCSEG00000004610	rbm12b	62	45.455	Cynoglossus_semilaevis
ENSMZEG00005005435	zgc:153215	85	63.218	ENSCVAG00000009259	-	99	63.218	Cyprinodon_variegatus
ENSMZEG00005005435	zgc:153215	99	36.724	ENSDARG00000055889	zgc:153215	99	37.500	Danio_rerio
ENSMZEG00005005435	zgc:153215	100	38.498	ENSELUG00000009039	zgc:153215	97	38.951	Esox_lucius
ENSMZEG00005005435	zgc:153215	72	68.132	ENSFHEG00000014539	zgc:153215	95	68.132	Fundulus_heteroclitus
ENSMZEG00005005435	zgc:153215	78	46.591	ENSGMOG00000013467	rbm12b	74	46.591	Gadus_morhua
ENSMZEG00005005435	zgc:153215	98	45.679	ENSGAFG00000007845	zgc:153215	98	45.679	Gambusia_affinis
ENSMZEG00005005435	zgc:153215	81	39.623	ENSGACG00000008682	rbm12b	72	39.623	Gasterosteus_aculeatus
ENSMZEG00005005435	zgc:153215	100	99.475	ENSHBUG00000016150	zgc:153215	100	99.475	Haplochromis_burtoni
ENSMZEG00005005435	zgc:153215	79	45.455	ENSHBUG00000016227	rbm12b	72	45.455	Haplochromis_burtoni
ENSMZEG00005005435	zgc:153215	100	35.826	ENSIPUG00000019731	zgc:153215	99	35.826	Ictalurus_punctatus
ENSMZEG00005005435	zgc:153215	86	57.937	ENSKMAG00000004958	zgc:153215	99	57.937	Kryptolebias_marmoratus
ENSMZEG00005005435	zgc:153215	86	76.250	ENSLBEG00000002597	zgc:153215	99	54.386	Labrus_bergylta
ENSMZEG00005005435	zgc:153215	99	30.890	ENSLOCG00000018344	rbm12b	74	31.239	Lepisosteus_oculatus
ENSMZEG00005005435	zgc:153215	100	57.461	ENSMAMG00000012038	zgc:153215	99	57.461	Mastacembelus_armatus
ENSMZEG00005005435	zgc:153215	78	46.591	ENSMZEG00005014845	rbm12b	72	46.591	Maylandia_zebra
ENSMZEG00005005435	zgc:153215	79	46.591	ENSMZEG00005015005	rbm12b	74	46.591	Maylandia_zebra
ENSMZEG00005005435	zgc:153215	81	43.182	ENSMMOG00000002404	rbm12b	69	43.182	Mola_mola
ENSMZEG00005005435	zgc:153215	85	55.725	ENSMMOG00000003372	zgc:153215	99	55.725	Mola_mola
ENSMZEG00005005435	zgc:153215	79	46.591	ENSMALG00000012059	rbm12b	73	46.591	Monopterus_albus
ENSMZEG00005005435	zgc:153215	99	49.650	ENSMALG00000001222	zgc:153215	99	49.650	Monopterus_albus
ENSMZEG00005005435	zgc:153215	100	97.023	ENSNBRG00000013644	zgc:153215	100	97.023	Neolamprologus_brichardi
ENSMZEG00005005435	zgc:153215	80	46.591	ENSNBRG00000015057	rbm12b	74	46.591	Neolamprologus_brichardi
ENSMZEG00005005435	zgc:153215	99	88.693	ENSONIG00000006054	zgc:153215	100	88.693	Oreochromis_niloticus
ENSMZEG00005005435	zgc:153215	80	47.727	ENSONIG00000020612	rbm12b	74	47.727	Oreochromis_niloticus
ENSMZEG00005005435	zgc:153215	77	48.810	ENSORLG00000008228	rbm12b	71	48.810	Oryzias_latipes
ENSMZEG00005005435	zgc:153215	77	48.810	ENSORLG00020013619	rbm12b	71	48.810	Oryzias_latipes_hni
ENSMZEG00005005435	zgc:153215	77	48.810	ENSORLG00015019999	rbm12b	71	48.810	Oryzias_latipes_hsok
ENSMZEG00005005435	zgc:153215	79	67.073	ENSOMEG00000004220	zgc:153215	92	66.304	Oryzias_melastigma
ENSMZEG00005005435	zgc:153215	78	48.810	ENSOMEG00000022523	rbm12b	72	48.810	Oryzias_melastigma
ENSMZEG00005005435	zgc:153215	99	33.857	ENSPKIG00000014851	zgc:153215	99	33.857	Paramormyrops_kingsleyae
ENSMZEG00005005435	zgc:153215	99	42.331	ENSPFOG00000017451	zgc:153215	99	42.331	Poecilia_formosa
ENSMZEG00005005435	zgc:153215	84	51.818	ENSPLAG00000000232	zgc:153215	99	51.818	Poecilia_latipinna
ENSMZEG00005005435	zgc:153215	91	53.153	ENSPMEG00000016662	zgc:153215	99	53.153	Poecilia_mexicana
ENSMZEG00005005435	zgc:153215	99	44.714	ENSPREG00000018608	zgc:153215	99	45.581	Poecilia_reticulata
ENSMZEG00005005435	zgc:153215	79	46.591	ENSPNYG00000016696	rbm12b	74	46.591	Pundamilia_nyererei
ENSMZEG00005005435	zgc:153215	81	97.872	ENSPNYG00000018125	zgc:153215	97	97.872	Pundamilia_nyererei
ENSMZEG00005005435	zgc:153215	99	35.726	ENSPNAG00000025628	zgc:153215	99	35.726	Pygocentrus_nattereri
ENSMZEG00005005435	zgc:153215	100	36.724	ENSSFOG00015009427	zgc:153215	99	36.724	Scleropages_formosus
ENSMZEG00005005435	zgc:153215	86	64.835	ENSSMAG00000019013	zgc:153215	94	64.835	Scophthalmus_maximus
ENSMZEG00005005435	zgc:153215	100	54.325	ENSSDUG00000012545	zgc:153215	99	54.325	Seriola_dumerili
ENSMZEG00005005435	zgc:153215	100	60.171	ENSSLDG00000013581	zgc:153215	99	60.171	Seriola_lalandi_dorsalis
ENSMZEG00005005435	zgc:153215	78	41.667	ENSSARG00000011845	-	57	41.667	Sorex_araneus
ENSMZEG00005005435	zgc:153215	100	49.864	ENSSPAG00000023584	zgc:153215	100	50.136	Stegastes_partitus
ENSMZEG00005005435	zgc:153215	78	46.429	ENSTRUG00000013738	rbm12b	74	46.429	Takifugu_rubripes
ENSMZEG00005005435	zgc:153215	77	47.758	ENSTNIG00000018374	-	99	47.758	Tetraodon_nigroviridis
ENSMZEG00005005435	zgc:153215	82	36.709	ENSXETG00000025920	-	95	36.709	Xenopus_tropicalis
ENSMZEG00005005435	zgc:153215	79	45.055	ENSXETG00000014694	rbm12b	95	45.055	Xenopus_tropicalis
ENSMZEG00005005435	zgc:153215	78	39.535	ENSXETG00000014696	rbm12b	63	39.535	Xenopus_tropicalis
ENSMZEG00005005435	zgc:153215	99	45.565	ENSXCOG00000019654	zgc:153215	98	45.565	Xiphophorus_couchianus
ENSMZEG00005005435	zgc:153215	63	53.030	ENSXMAG00000013169	-	90	53.030	Xiphophorus_maculatus