EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005441 (Gene tree)
Gene ID: 101478694
Gene Symbol: rab23
Alias: zgc:110261
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 5138 bases
Position: chrLG13:18669330-18674467
Accession: 101478694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007093	MMR_HSR1	PF01926.23	2e-06	1	1
ENSMZEP00005007076	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007401	-	615	-	ENSMZEP00005007093	204 (aa)	-	-
ENSMZET00005007384	-	1495	XM_004555970	ENSMZEP00005007076	235 (aa)	XP_004556027	UPI000329C082

Gene Model

Click here to download ENSMZEG00005005441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005441	rab23	99	83.475	ENSG00000112210	RAB23	99	83.475	Homo_sapiens
ENSMZEG00005005441	rab23	100	97.447	ENSAPOG00000008892	rab23	100	97.447	Acanthochromis_polyacanthus
ENSMZEG00005005441	rab23	99	83.051	ENSAMEG00000006825	RAB23	99	83.051	Ailuropoda_melanoleuca
ENSMZEG00005005441	rab23	100	98.039	ENSACIG00000020496	rab23	100	98.039	Amphilophus_citrinellus
ENSMZEG00005005441	rab23	100	97.872	ENSAOCG00000004234	rab23	100	97.872	Amphiprion_ocellaris
ENSMZEG00005005441	rab23	100	97.872	ENSAPEG00000019758	rab23	100	97.872	Amphiprion_percula
ENSMZEG00005005441	rab23	100	97.447	ENSATEG00000020913	rab23	100	97.447	Anabas_testudineus
ENSMZEG00005005441	rab23	78	91.875	ENSAPLG00000003715	RAB23	100	92.090	Anas_platyrhynchos
ENSMZEG00005005441	rab23	99	79.325	ENSACAG00000006656	RAB23	99	79.325	Anolis_carolinensis
ENSMZEG00005005441	rab23	99	83.898	ENSANAG00000027052	-	99	83.475	Aotus_nancymaae
ENSMZEG00005005441	rab23	100	100.000	ENSACLG00000002819	rab23	100	100.000	Astatotilapia_calliptera
ENSMZEG00005005441	rab23	100	90.291	ENSAMXG00000014960	rab23	100	90.291	Astyanax_mexicanus
ENSMZEG00005005441	rab23	99	82.203	ENSBTAG00000005362	RAB23	99	82.203	Bos_taurus
ENSMZEG00005005441	rab23	99	83.898	ENSCJAG00000010247	RAB23	99	83.475	Callithrix_jacchus
ENSMZEG00005005441	rab23	99	83.475	ENSCAFG00000002459	RAB23	99	83.475	Canis_familiaris
ENSMZEG00005005441	rab23	99	83.475	ENSCAFG00020015900	RAB23	99	83.475	Canis_lupus_dingo
ENSMZEG00005005441	rab23	99	82.203	ENSCHIG00000009815	RAB23	99	82.203	Capra_hircus
ENSMZEG00005005441	rab23	100	83.544	ENSTSYG00000029126	RAB23	100	83.544	Carlito_syrichta
ENSMZEG00005005441	rab23	99	81.702	ENSCPOG00000030218	RAB23	99	81.702	Cavia_porcellus
ENSMZEG00005005441	rab23	99	83.475	ENSCCAG00000020364	RAB23	99	83.051	Cebus_capucinus
ENSMZEG00005005441	rab23	99	83.898	ENSCATG00000027876	RAB23	99	83.898	Cercocebus_atys
ENSMZEG00005005441	rab23	99	82.627	ENSCLAG00000000797	RAB23	99	82.627	Chinchilla_lanigera
ENSMZEG00005005441	rab23	99	83.051	ENSCSAG00000013438	RAB23	99	83.051	Chlorocebus_sabaeus
ENSMZEG00005005441	rab23	99	84.746	ENSCPBG00000022640	RAB23	99	84.322	Chrysemys_picta_bellii
ENSMZEG00005005441	rab23	100	66.255	ENSCING00000001155	-	100	67.078	Ciona_intestinalis
ENSMZEG00005005441	rab23	100	63.900	ENSCSAVG00000001356	-	100	64.050	Ciona_savignyi
ENSMZEG00005005441	rab23	99	83.051	ENSCANG00000031065	RAB23	99	83.051	Colobus_angolensis_palliatus
ENSMZEG00005005441	rab23	99	84.746	ENSCGRG00001008994	Rab23	99	84.746	Cricetulus_griseus_chok1gshd
ENSMZEG00005005441	rab23	99	83.830	ENSCGRG00000013630	Rab23	99	83.830	Cricetulus_griseus_crigri
ENSMZEG00005005441	rab23	100	95.098	ENSCSEG00000010565	rab23	100	95.098	Cynoglossus_semilaevis
ENSMZEG00005005441	rab23	100	94.118	ENSCVAG00000020501	rab23	100	94.118	Cyprinodon_variegatus
ENSMZEG00005005441	rab23	100	88.186	ENSDARG00000004151	rab23	100	88.186	Danio_rerio
ENSMZEG00005005441	rab23	99	82.203	ENSDNOG00000015501	RAB23	99	82.203	Dasypus_novemcinctus
ENSMZEG00005005441	rab23	100	81.857	ENSDORG00000028344	Rab23	100	81.857	Dipodomys_ordii
ENSMZEG00005005441	rab23	85	71.098	FBgn0037364	Rab23	82	61.674	Drosophila_melanogaster
ENSMZEG00005005441	rab23	97	65.948	ENSEBUG00000010861	-	92	65.948	Eptatretus_burgeri
ENSMZEG00005005441	rab23	99	83.475	ENSEASG00005003529	RAB23	99	83.475	Equus_asinus_asinus
ENSMZEG00005005441	rab23	99	83.051	ENSECAG00000013427	RAB23	99	83.051	Equus_caballus
ENSMZEG00005005441	rab23	100	82.278	ENSEEUG00000015045	RAB23	100	82.278	Erinaceus_europaeus
ENSMZEG00005005441	rab23	100	90.213	ENSELUG00000020788	rab23	100	90.213	Esox_lucius
ENSMZEG00005005441	rab23	99	83.475	ENSFCAG00000044358	RAB23	99	83.475	Felis_catus
ENSMZEG00005005441	rab23	99	82.627	ENSFALG00000001708	RAB23	99	82.627	Ficedula_albicollis
ENSMZEG00005005441	rab23	99	82.203	ENSFDAG00000014834	RAB23	99	82.203	Fukomys_damarensis
ENSMZEG00005005441	rab23	100	94.468	ENSFHEG00000023069	rab23	100	94.468	Fundulus_heteroclitus
ENSMZEG00005005441	rab23	100	91.915	ENSGMOG00000005102	rab23	100	91.915	Gadus_morhua
ENSMZEG00005005441	rab23	99	83.475	ENSGALG00000016279	RAB23	99	83.475	Gallus_gallus
ENSMZEG00005005441	rab23	100	93.627	ENSGAFG00000007684	rab23	100	93.627	Gambusia_affinis
ENSMZEG00005005441	rab23	100	94.468	ENSGACG00000006151	rab23	100	94.468	Gasterosteus_aculeatus
ENSMZEG00005005441	rab23	99	85.169	ENSGAGG00000012709	RAB23	99	84.746	Gopherus_agassizii
ENSMZEG00005005441	rab23	100	100.000	ENSHBUG00000007966	rab23	100	100.000	Haplochromis_burtoni
ENSMZEG00005005441	rab23	99	67.917	ENSHGLG00000009371	-	99	67.083	Heterocephalus_glaber_female
ENSMZEG00005005441	rab23	99	83.898	ENSHGLG00000013030	-	99	83.898	Heterocephalus_glaber_female
ENSMZEG00005005441	rab23	99	83.898	ENSHGLG00100005945	-	99	83.898	Heterocephalus_glaber_male
ENSMZEG00005005441	rab23	99	67.917	ENSHGLG00100017177	-	99	67.083	Heterocephalus_glaber_male
ENSMZEG00005005441	rab23	100	93.627	ENSHCOG00000013919	rab23	100	93.627	Hippocampus_comes
ENSMZEG00005005441	rab23	100	88.350	ENSIPUG00000016494	rab23	100	88.350	Ictalurus_punctatus
ENSMZEG00005005441	rab23	99	83.475	ENSSTOG00000010962	RAB23	99	83.475	Ictidomys_tridecemlineatus
ENSMZEG00005005441	rab23	99	82.627	ENSJJAG00000020094	Rab23	99	82.627	Jaculus_jaculus
ENSMZEG00005005441	rab23	100	95.745	ENSKMAG00000018270	rab23	100	95.745	Kryptolebias_marmoratus
ENSMZEG00005005441	rab23	100	97.021	ENSLBEG00000013176	rab23	100	97.021	Labrus_bergylta
ENSMZEG00005005441	rab23	100	86.076	ENSLACG00000004025	RAB23	100	86.076	Latimeria_chalumnae
ENSMZEG00005005441	rab23	100	85.833	ENSLOCG00000016999	rab23	100	85.417	Lepisosteus_oculatus
ENSMZEG00005005441	rab23	99	83.898	ENSLAFG00000007209	RAB23	99	83.898	Loxodonta_africana
ENSMZEG00005005441	rab23	99	83.898	ENSMFAG00000032369	RAB23	99	83.898	Macaca_fascicularis
ENSMZEG00005005441	rab23	99	83.898	ENSMMUG00000018003	RAB23	99	83.898	Macaca_mulatta
ENSMZEG00005005441	rab23	99	83.898	ENSMNEG00000037012	RAB23	99	83.898	Macaca_nemestrina
ENSMZEG00005005441	rab23	99	83.898	ENSMLEG00000042429	RAB23	99	83.898	Mandrillus_leucophaeus
ENSMZEG00005005441	rab23	100	96.170	ENSMAMG00000015456	rab23	100	96.170	Mastacembelus_armatus
ENSMZEG00005005441	rab23	99	83.898	ENSMGAG00000013882	RAB23	99	83.898	Meleagris_gallopavo
ENSMZEG00005005441	rab23	99	84.322	ENSMICG00000014037	RAB23	99	84.322	Microcebus_murinus
ENSMZEG00005005441	rab23	99	83.475	ENSMOCG00000000444	Rab23	99	83.475	Microtus_ochrogaster
ENSMZEG00005005441	rab23	100	95.588	ENSMMOG00000007703	rab23	100	95.588	Mola_mola
ENSMZEG00005005441	rab23	99	83.051	ENSMODG00000018720	RAB23	99	83.051	Monodelphis_domestica
ENSMZEG00005005441	rab23	100	95.319	ENSMALG00000002136	rab23	100	95.319	Monopterus_albus
ENSMZEG00005005441	rab23	99	82.203	MGP_CAROLIEiJ_G0014015	Rab23	99	82.203	Mus_caroli
ENSMZEG00005005441	rab23	99	81.780	ENSMUSG00000004768	Rab23	99	81.780	Mus_musculus
ENSMZEG00005005441	rab23	99	81.356	MGP_PahariEiJ_G0027261	Rab23	99	81.356	Mus_pahari
ENSMZEG00005005441	rab23	99	81.780	MGP_SPRETEiJ_G0014820	Rab23	99	81.780	Mus_spretus
ENSMZEG00005005441	rab23	99	74.684	ENSMPUG00000002642	RAB23	99	74.684	Mustela_putorius_furo
ENSMZEG00005005441	rab23	99	83.898	ENSMLUG00000004058	RAB23	99	83.898	Myotis_lucifugus
ENSMZEG00005005441	rab23	99	83.051	ENSNGAG00000018038	Rab23	99	83.051	Nannospalax_galili
ENSMZEG00005005441	rab23	100	100.000	ENSNBRG00000013691	rab23	100	100.000	Neolamprologus_brichardi
ENSMZEG00005005441	rab23	99	83.898	ENSNLEG00000027830	RAB23	99	83.898	Nomascus_leucogenys
ENSMZEG00005005441	rab23	99	81.356	ENSODEG00000016056	RAB23	99	81.356	Octodon_degus
ENSMZEG00005005441	rab23	100	99.153	ENSONIG00000009749	rab23	100	99.153	Oreochromis_niloticus
ENSMZEG00005005441	rab23	99	84.746	ENSOANG00000001398	RAB23	99	84.746	Ornithorhynchus_anatinus
ENSMZEG00005005441	rab23	99	83.898	ENSOCUG00000004816	RAB23	99	83.898	Oryctolagus_cuniculus
ENSMZEG00005005441	rab23	100	93.137	ENSORLG00000010115	rab23	100	93.137	Oryzias_latipes
ENSMZEG00005005441	rab23	100	93.137	ENSORLG00020020220	rab23	100	93.137	Oryzias_latipes_hni
ENSMZEG00005005441	rab23	100	93.137	ENSORLG00015004033	rab23	100	93.137	Oryzias_latipes_hsok
ENSMZEG00005005441	rab23	100	94.118	ENSOMEG00000001706	rab23	100	94.118	Oryzias_melastigma
ENSMZEG00005005441	rab23	99	83.051	ENSOGAG00000005675	RAB23	99	83.051	Otolemur_garnettii
ENSMZEG00005005441	rab23	99	82.203	ENSOARG00000005749	RAB23	99	82.203	Ovis_aries
ENSMZEG00005005441	rab23	99	83.475	ENSPPAG00000010023	RAB23	99	83.475	Pan_paniscus
ENSMZEG00005005441	rab23	99	83.051	ENSPPRG00000012453	RAB23	99	83.051	Panthera_pardus
ENSMZEG00005005441	rab23	99	83.475	ENSPTIG00000009435	RAB23	99	83.475	Panthera_tigris_altaica
ENSMZEG00005005441	rab23	99	83.898	ENSPTRG00000043341	RAB23	99	83.898	Pan_troglodytes
ENSMZEG00005005441	rab23	99	83.898	ENSPANG00000017772	RAB23	99	83.898	Papio_anubis
ENSMZEG00005005441	rab23	78	95.625	ENSPKIG00000024310	rab23	99	85.075	Paramormyrops_kingsleyae
ENSMZEG00005005441	rab23	99	85.169	ENSPSIG00000015579	RAB23	99	84.746	Pelodiscus_sinensis
ENSMZEG00005005441	rab23	100	92.157	ENSPMGG00000008577	rab23	100	92.157	Periophthalmus_magnuspinnatus
ENSMZEG00005005441	rab23	99	83.051	ENSPEMG00000023271	Rab23	99	83.051	Peromyscus_maniculatus_bairdii
ENSMZEG00005005441	rab23	100	67.660	ENSPMAG00000006835	-	100	67.660	Petromyzon_marinus
ENSMZEG00005005441	rab23	99	83.051	ENSPCIG00000007267	RAB23	99	83.051	Phascolarctos_cinereus
ENSMZEG00005005441	rab23	100	94.468	ENSPFOG00000011493	rab23	100	94.468	Poecilia_formosa
ENSMZEG00005005441	rab23	100	94.118	ENSPLAG00000011697	rab23	100	94.118	Poecilia_latipinna
ENSMZEG00005005441	rab23	100	94.118	ENSPMEG00000017300	rab23	100	94.118	Poecilia_mexicana
ENSMZEG00005005441	rab23	100	94.608	ENSPREG00000022509	rab23	100	94.608	Poecilia_reticulata
ENSMZEG00005005441	rab23	99	83.898	ENSPPYG00000016739	RAB23	99	83.898	Pongo_abelii
ENSMZEG00005005441	rab23	99	83.898	ENSPCOG00000028471	RAB23	99	83.898	Propithecus_coquereli
ENSMZEG00005005441	rab23	99	75.000	ENSPVAG00000017693	RAB23	99	75.000	Pteropus_vampyrus
ENSMZEG00005005441	rab23	100	100.000	ENSPNYG00000019639	rab23	100	100.000	Pundamilia_nyererei
ENSMZEG00005005441	rab23	100	89.873	ENSPNAG00000024728	rab23	100	89.873	Pygocentrus_nattereri
ENSMZEG00005005441	rab23	99	83.051	ENSRNOG00000012629	Rab23	99	83.051	Rattus_norvegicus
ENSMZEG00005005441	rab23	99	78.838	ENSRBIG00000030547	RAB23	99	78.838	Rhinopithecus_bieti
ENSMZEG00005005441	rab23	99	83.898	ENSRROG00000035920	RAB23	99	83.898	Rhinopithecus_roxellana
ENSMZEG00005005441	rab23	99	83.051	ENSSBOG00000033237	RAB23	99	83.051	Saimiri_boliviensis_boliviensis
ENSMZEG00005005441	rab23	99	83.051	ENSSHAG00000006379	RAB23	99	83.051	Sarcophilus_harrisii
ENSMZEG00005005441	rab23	100	89.806	ENSSFOG00015012604	rab23	100	89.806	Scleropages_formosus
ENSMZEG00005005441	rab23	100	96.170	ENSSMAG00000006341	rab23	100	96.170	Scophthalmus_maximus
ENSMZEG00005005441	rab23	100	97.872	ENSSDUG00000023508	rab23	100	97.872	Seriola_dumerili
ENSMZEG00005005441	rab23	100	97.872	ENSSLDG00000000287	rab23	100	97.872	Seriola_lalandi_dorsalis
ENSMZEG00005005441	rab23	99	83.051	ENSSARG00000013689	RAB23	99	83.051	Sorex_araneus
ENSMZEG00005005441	rab23	99	85.593	ENSSPUG00000006274	RAB23	99	85.593	Sphenodon_punctatus
ENSMZEG00005005441	rab23	100	97.872	ENSSPAG00000010373	rab23	100	97.872	Stegastes_partitus
ENSMZEG00005005441	rab23	99	82.927	ENSSSCG00000029539	RAB23	99	82.927	Sus_scrofa
ENSMZEG00005005441	rab23	99	83.051	ENSTGUG00000012794	RAB23	99	83.051	Taeniopygia_guttata
ENSMZEG00005005441	rab23	100	93.627	ENSTRUG00000015697	rab23	100	93.627	Takifugu_rubripes
ENSMZEG00005005441	rab23	100	93.191	ENSTNIG00000016575	rab23	100	93.191	Tetraodon_nigroviridis
ENSMZEG00005005441	rab23	99	83.475	ENSUAMG00000013367	RAB23	99	83.475	Ursus_americanus
ENSMZEG00005005441	rab23	99	83.475	ENSUMAG00000018629	RAB23	99	83.475	Ursus_maritimus
ENSMZEG00005005441	rab23	92	56.545	ENSVPAG00000006805	RAB23	100	64.921	Vicugna_pacos
ENSMZEG00005005441	rab23	99	83.898	ENSVVUG00000008535	RAB23	99	83.898	Vulpes_vulpes
ENSMZEG00005005441	rab23	100	78.571	ENSXETG00000004449	rab23	100	78.571	Xenopus_tropicalis
ENSMZEG00005005441	rab23	100	93.617	ENSXCOG00000011864	rab23	100	93.617	Xiphophorus_couchianus
ENSMZEG00005005441	rab23	100	94.043	ENSXMAG00000009387	rab23	100	94.043	Xiphophorus_maculatus