EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005544 (Gene tree)
Gene ID: 101480942
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 3473 bases
Position: chrLG18:19233601-19237073
Accession: 101480942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007212	S4	PF01479.25	3.7e-09	1	1
ENSMZEP00005007205	S4	PF01479.25	3.3e-08	1	1
ENSMZEP00005007212	Ribosomal_S4	PF00163.19	7e-09	1	1
ENSMZEP00005007205	Ribosomal_S4	PF00163.19	7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007515	-	2172	-	ENSMZEP00005007205	187 (aa)	-	-
ENSMZET00005007522	-	1913	XM_004570510	ENSMZEP00005007212	183 (aa)	XP_004570567	UPI00032A1377

Gene Model

Click here to download ENSMZEG00005005544's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005544	imp3	100	92.350	ENSAPOG00000014720	imp3	100	92.350	Acanthochromis_polyacanthus
ENSMZEG00005005544	imp3	100	71.739	ENSAMEG00000019247	IMP3	100	71.739	Ailuropoda_melanoleuca
ENSMZEG00005005544	imp3	98	96.089	ENSACIG00000022070	imp3	96	96.089	Amphilophus_citrinellus
ENSMZEG00005005544	imp3	100	91.803	ENSAOCG00000015761	imp3	100	91.803	Amphiprion_ocellaris
ENSMZEG00005005544	imp3	100	91.257	ENSAPEG00000005250	imp3	100	91.257	Amphiprion_percula
ENSMZEG00005005544	imp3	100	95.628	ENSATEG00000020021	imp3	100	95.628	Anabas_testudineus
ENSMZEG00005005544	imp3	100	66.310	ENSACAG00000016259	IMP3	100	66.310	Anolis_carolinensis
ENSMZEG00005005544	imp3	99	59.890	ENSANAG00000036874	-	99	59.890	Aotus_nancymaae
ENSMZEG00005005544	imp3	100	70.109	ENSANAG00000016669	-	100	70.109	Aotus_nancymaae
ENSMZEG00005005544	imp3	100	100.000	ENSACLG00000009929	imp3	100	100.000	Astatotilapia_calliptera
ENSMZEG00005005544	imp3	96	86.857	ENSAMXG00000018715	imp3	99	86.857	Astyanax_mexicanus
ENSMZEG00005005544	imp3	99	53.297	WBGene00016740	C48B6.2	99	53.297	Caenorhabditis_elegans
ENSMZEG00005005544	imp3	100	70.109	ENSCJAG00000044585	IMP3	100	70.109	Callithrix_jacchus
ENSMZEG00005005544	imp3	100	68.478	ENSCAFG00000018039	IMP3	82	68.478	Canis_familiaris
ENSMZEG00005005544	imp3	100	55.978	ENSCAFG00020006737	-	100	56.522	Canis_lupus_dingo
ENSMZEG00005005544	imp3	100	68.478	ENSCAFG00020003760	-	100	68.478	Canis_lupus_dingo
ENSMZEG00005005544	imp3	100	71.196	ENSCHIG00000006295	IMP3	100	71.196	Capra_hircus
ENSMZEG00005005544	imp3	100	70.652	ENSTSYG00000005503	IMP3	100	70.652	Carlito_syrichta
ENSMZEG00005005544	imp3	100	71.196	ENSCPOG00000012016	IMP3	100	71.196	Cavia_porcellus
ENSMZEG00005005544	imp3	98	61.111	ENSCCAG00000023378	-	99	60.345	Cebus_capucinus
ENSMZEG00005005544	imp3	100	70.109	ENSCCAG00000002712	-	100	70.109	Cebus_capucinus
ENSMZEG00005005544	imp3	100	70.652	ENSCATG00000015188	IMP3	100	70.652	Cercocebus_atys
ENSMZEG00005005544	imp3	100	70.652	ENSCSAG00000019732	IMP3	100	70.652	Chlorocebus_sabaeus
ENSMZEG00005005544	imp3	100	71.196	ENSCHOG00000012046	IMP3	100	71.196	Choloepus_hoffmanni
ENSMZEG00005005544	imp3	100	64.865	ENSCPBG00000021662	IMP3	100	64.865	Chrysemys_picta_bellii
ENSMZEG00005005544	imp3	99	66.851	ENSCING00000004233	-	100	66.851	Ciona_intestinalis
ENSMZEG00005005544	imp3	99	67.956	ENSCSAVG00000000698	-	100	67.956	Ciona_savignyi
ENSMZEG00005005544	imp3	100	70.652	ENSCANG00000018342	IMP3	100	70.652	Colobus_angolensis_palliatus
ENSMZEG00005005544	imp3	100	69.565	ENSCGRG00001001326	Imp3	100	69.565	Cricetulus_griseus_chok1gshd
ENSMZEG00005005544	imp3	100	69.565	ENSCGRG00000018907	Imp3	100	69.565	Cricetulus_griseus_crigri
ENSMZEG00005005544	imp3	99	91.209	ENSCSEG00000017200	imp3	99	91.209	Cynoglossus_semilaevis
ENSMZEG00005005544	imp3	100	82.105	ENSCVAG00000019511	imp3	100	82.105	Cyprinodon_variegatus
ENSMZEG00005005544	imp3	100	85.792	ENSDARG00000115266	imp3	100	85.792	Danio_rerio
ENSMZEG00005005544	imp3	100	70.109	ENSDNOG00000015787	IMP3	81	70.109	Dasypus_novemcinctus
ENSMZEG00005005544	imp3	100	69.022	ENSDORG00000029301	Imp3	100	69.022	Dipodomys_ordii
ENSMZEG00005005544	imp3	99	61.326	FBgn0034232	CG4866	100	61.326	Drosophila_melanogaster
ENSMZEG00005005544	imp3	100	72.283	ENSETEG00000004278	IMP3	100	72.283	Echinops_telfairi
ENSMZEG00005005544	imp3	99	73.481	ENSEBUG00000002343	imp3	99	73.481	Eptatretus_burgeri
ENSMZEG00005005544	imp3	100	70.109	ENSEASG00005015693	IMP3	100	70.109	Equus_asinus_asinus
ENSMZEG00005005544	imp3	100	70.652	ENSECAG00000015786	IMP3	100	70.652	Equus_caballus
ENSMZEG00005005544	imp3	100	87.978	ENSELUG00000023264	imp3	100	87.978	Esox_lucius
ENSMZEG00005005544	imp3	100	70.652	ENSFCAG00000040328	IMP3	100	70.652	Felis_catus
ENSMZEG00005005544	imp3	71	55.725	ENSFALG00000014811	IMP3	99	58.015	Ficedula_albicollis
ENSMZEG00005005544	imp3	100	71.196	ENSFDAG00000018422	IMP3	100	71.196	Fukomys_damarensis
ENSMZEG00005005544	imp3	100	92.896	ENSFHEG00000016954	imp3	100	92.896	Fundulus_heteroclitus
ENSMZEG00005005544	imp3	100	87.978	ENSGMOG00000018162	imp3	100	87.978	Gadus_morhua
ENSMZEG00005005544	imp3	100	56.216	ENSGALG00000040238	IMP3	100	57.838	Gallus_gallus
ENSMZEG00005005544	imp3	100	94.536	ENSGAFG00000007425	imp3	100	94.536	Gambusia_affinis
ENSMZEG00005005544	imp3	100	90.710	ENSGACG00000015998	imp3	100	90.710	Gasterosteus_aculeatus
ENSMZEG00005005544	imp3	100	63.784	ENSGAGG00000008163	IMP3	100	63.784	Gopherus_agassizii
ENSMZEG00005005544	imp3	100	70.652	ENSGGOG00000025122	IMP3	100	70.652	Gorilla_gorilla
ENSMZEG00005005544	imp3	100	99.454	ENSHBUG00000018453	imp3	100	99.454	Haplochromis_burtoni
ENSMZEG00005005544	imp3	100	70.652	ENSHGLG00000019824	IMP3	100	70.652	Heterocephalus_glaber_female
ENSMZEG00005005544	imp3	100	70.652	ENSHGLG00100020660	IMP3	100	70.652	Heterocephalus_glaber_male
ENSMZEG00005005544	imp3	100	91.803	ENSHCOG00000020565	imp3	100	91.803	Hippocampus_comes
ENSMZEG00005005544	imp3	100	85.792	ENSIPUG00000013142	imp3	100	85.792	Ictalurus_punctatus
ENSMZEG00005005544	imp3	100	71.196	ENSSTOG00000030143	IMP3	100	71.196	Ictidomys_tridecemlineatus
ENSMZEG00005005544	imp3	100	92.350	ENSKMAG00000001956	imp3	100	92.350	Kryptolebias_marmoratus
ENSMZEG00005005544	imp3	100	91.803	ENSLBEG00000008178	imp3	100	91.803	Labrus_bergylta
ENSMZEG00005005544	imp3	100	84.153	ENSLACG00000022148	imp3	100	84.153	Latimeria_chalumnae
ENSMZEG00005005544	imp3	100	84.153	ENSLOCG00000010237	imp3	100	84.153	Lepisosteus_oculatus
ENSMZEG00005005544	imp3	99	70.879	ENSLAFG00000004425	IMP3	99	70.879	Loxodonta_africana
ENSMZEG00005005544	imp3	100	70.652	ENSMFAG00000008867	IMP3	100	70.652	Macaca_fascicularis
ENSMZEG00005005544	imp3	100	70.652	ENSMMUG00000016103	IMP3	100	70.652	Macaca_mulatta
ENSMZEG00005005544	imp3	100	70.652	ENSMNEG00000026328	IMP3	100	70.652	Macaca_nemestrina
ENSMZEG00005005544	imp3	100	95.628	ENSMAMG00000003215	imp3	100	95.628	Mastacembelus_armatus
ENSMZEG00005005544	imp3	100	70.109	ENSMAUG00000010279	Imp3	100	70.109	Mesocricetus_auratus
ENSMZEG00005005544	imp3	100	70.652	ENSMICG00000044149	IMP3	100	70.652	Microcebus_murinus
ENSMZEG00005005544	imp3	100	70.652	ENSMOCG00000008647	Imp3	100	70.652	Microtus_ochrogaster
ENSMZEG00005005544	imp3	96	95.429	ENSMMOG00000018117	imp3	84	95.429	Mola_mola
ENSMZEG00005005544	imp3	100	69.565	ENSMODG00000025193	IMP3	100	69.565	Monodelphis_domestica
ENSMZEG00005005544	imp3	100	95.082	ENSMALG00000006505	imp3	100	95.082	Monopterus_albus
ENSMZEG00005005544	imp3	100	69.565	MGP_CAROLIEiJ_G0032258	Imp3	100	69.565	Mus_caroli
ENSMZEG00005005544	imp3	100	69.565	ENSMUSG00000032288	Imp3	100	69.565	Mus_musculus
ENSMZEG00005005544	imp3	100	69.565	MGP_PahariEiJ_G0015125	Imp3	100	69.565	Mus_pahari
ENSMZEG00005005544	imp3	100	69.565	MGP_SPRETEiJ_G0033398	Imp3	100	69.565	Mus_spretus
ENSMZEG00005005544	imp3	100	70.109	ENSMPUG00000020147	IMP3	100	70.109	Mustela_putorius_furo
ENSMZEG00005005544	imp3	100	70.652	ENSMLUG00000014032	IMP3	100	70.652	Myotis_lucifugus
ENSMZEG00005005544	imp3	100	69.022	ENSNGAG00000017248	Imp3	100	69.022	Nannospalax_galili
ENSMZEG00005005544	imp3	100	98.930	ENSNBRG00000004060	imp3	100	98.930	Neolamprologus_brichardi
ENSMZEG00005005544	imp3	100	70.652	ENSOPRG00000015906	-	100	70.652	Ochotona_princeps
ENSMZEG00005005544	imp3	100	71.196	ENSODEG00000020194	IMP3	100	71.196	Octodon_degus
ENSMZEG00005005544	imp3	100	97.814	ENSONIG00000010661	imp3	100	97.814	Oreochromis_niloticus
ENSMZEG00005005544	imp3	100	70.652	ENSOCUG00000004690	IMP3	100	70.652	Oryctolagus_cuniculus
ENSMZEG00005005544	imp3	100	91.257	ENSORLG00000004484	imp3	100	91.257	Oryzias_latipes
ENSMZEG00005005544	imp3	100	91.257	ENSORLG00020003771	imp3	100	91.257	Oryzias_latipes_hni
ENSMZEG00005005544	imp3	100	90.710	ENSORLG00015006933	imp3	100	90.710	Oryzias_latipes_hsok
ENSMZEG00005005544	imp3	100	92.350	ENSOMEG00000016160	imp3	100	92.350	Oryzias_melastigma
ENSMZEG00005005544	imp3	100	70.652	ENSOGAG00000004917	IMP3	100	70.652	Otolemur_garnettii
ENSMZEG00005005544	imp3	100	70.652	ENSPPAG00000009241	IMP3	100	70.652	Pan_paniscus
ENSMZEG00005005544	imp3	100	70.652	ENSPPRG00000018701	IMP3	100	70.652	Panthera_pardus
ENSMZEG00005005544	imp3	100	70.652	ENSPTRG00000052235	IMP3	100	70.652	Pan_troglodytes
ENSMZEG00005005544	imp3	100	70.652	ENSPANG00000013668	IMP3	100	70.652	Papio_anubis
ENSMZEG00005005544	imp3	100	87.978	ENSPKIG00000007169	imp3	100	87.978	Paramormyrops_kingsleyae
ENSMZEG00005005544	imp3	100	79.570	ENSPMGG00000009379	imp3	100	79.570	Periophthalmus_magnuspinnatus
ENSMZEG00005005544	imp3	100	69.565	ENSPEMG00000013003	Imp3	100	69.565	Peromyscus_maniculatus_bairdii
ENSMZEG00005005544	imp3	100	93.989	ENSPFOG00000016529	imp3	100	93.989	Poecilia_formosa
ENSMZEG00005005544	imp3	100	94.536	ENSPLAG00000013831	imp3	100	94.536	Poecilia_latipinna
ENSMZEG00005005544	imp3	100	93.443	ENSPMEG00000000797	imp3	100	93.443	Poecilia_mexicana
ENSMZEG00005005544	imp3	100	94.536	ENSPREG00000006885	imp3	100	94.536	Poecilia_reticulata
ENSMZEG00005005544	imp3	100	71.196	ENSPPYG00000006664	IMP3	100	71.196	Pongo_abelii
ENSMZEG00005005544	imp3	99	71.429	ENSPCAG00000006920	IMP3	99	71.429	Procavia_capensis
ENSMZEG00005005544	imp3	100	70.652	ENSPCOG00000012367	IMP3	100	70.652	Propithecus_coquereli
ENSMZEG00005005544	imp3	100	71.196	ENSPVAG00000010036	IMP3	100	71.196	Pteropus_vampyrus
ENSMZEG00005005544	imp3	100	100.000	ENSPNYG00000000324	imp3	100	100.000	Pundamilia_nyererei
ENSMZEG00005005544	imp3	100	91.803	ENSPNAG00000017113	imp3	100	91.803	Pygocentrus_nattereri
ENSMZEG00005005544	imp3	100	69.565	ENSRNOG00000017460	Imp3	100	69.565	Rattus_norvegicus
ENSMZEG00005005544	imp3	100	71.196	ENSRBIG00000024522	IMP3	100	71.196	Rhinopithecus_bieti
ENSMZEG00005005544	imp3	100	71.196	ENSRROG00000024157	IMP3	100	71.196	Rhinopithecus_roxellana
ENSMZEG00005005544	imp3	99	54.945	YHR148W	-	99	54.945	Saccharomyces_cerevisiae
ENSMZEG00005005544	imp3	99	61.538	ENSSBOG00000026404	-	99	61.538	Saimiri_boliviensis_boliviensis
ENSMZEG00005005544	imp3	100	70.109	ENSSBOG00000006542	-	100	70.109	Saimiri_boliviensis_boliviensis
ENSMZEG00005005544	imp3	99	67.033	ENSSHAG00000006200	IMP3	99	67.033	Sarcophilus_harrisii
ENSMZEG00005005544	imp3	100	87.432	ENSSFOG00015012483	imp3	100	87.432	Scleropages_formosus
ENSMZEG00005005544	imp3	100	95.628	ENSSMAG00000007865	imp3	100	95.628	Scophthalmus_maximus
ENSMZEG00005005544	imp3	100	94.536	ENSSDUG00000010594	imp3	100	94.536	Seriola_dumerili
ENSMZEG00005005544	imp3	100	94.536	ENSSLDG00000015587	imp3	100	94.536	Seriola_lalandi_dorsalis
ENSMZEG00005005544	imp3	100	71.196	ENSSARG00000009657	IMP3	100	71.196	Sorex_araneus
ENSMZEG00005005544	imp3	100	92.896	ENSSPAG00000002088	imp3	100	92.896	Stegastes_partitus
ENSMZEG00005005544	imp3	100	56.216	ENSTGUG00000013228	IMP3	100	57.838	Taeniopygia_guttata
ENSMZEG00005005544	imp3	99	90.659	ENSTRUG00000025783	imp3	99	90.659	Takifugu_rubripes
ENSMZEG00005005544	imp3	100	71.196	ENSUAMG00000022724	IMP3	100	71.196	Ursus_americanus
ENSMZEG00005005544	imp3	100	71.196	ENSUMAG00000003736	IMP3	100	71.196	Ursus_maritimus
ENSMZEG00005005544	imp3	100	69.022	ENSVVUG00000019589	IMP3	100	69.022	Vulpes_vulpes
ENSMZEG00005005544	imp3	96	95.429	ENSXCOG00000007392	imp3	96	95.429	Xiphophorus_couchianus
ENSMZEG00005005544	imp3	100	95.082	ENSXMAG00000023049	imp3	100	95.082	Xiphophorus_maculatus