EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005627 (Gene tree)
Gene ID: 101487212
Gene Symbol: scrt1b
Alias: zgc:113646
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4750 bases
Position: chrAGTA05000027.1:1294175-1298924
Accession: 101487212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007324	zf-C2H2	PF00096.26	2e-25	1	4
ENSMZEP00005007324	zf-C2H2	PF00096.26	2e-25	2	4
ENSMZEP00005007324	zf-C2H2	PF00096.26	2e-25	3	4
ENSMZEP00005007324	zf-C2H2	PF00096.26	2e-25	4	4
ENSMZEP00005007324	zf-met	PF12874.7	5.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007634	-	843	XM_004541401	ENSMZEP00005007324	280 (aa)	XP_004541458	UPI00032A1E50

Gene Model

Click here to download ENSMZEG00005005627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005627	scrt1b	99	77.431	ENSAPOG00000015197	-	99	77.431	Acanthochromis_polyacanthus
ENSMZEG00005005627	scrt1b	96	70.290	ENSAPOG00000003680	scrt2	96	70.290	Acanthochromis_polyacanthus
ENSMZEG00005005627	scrt1b	100	98.214	ENSAPOG00000009279	scrt1b	100	98.214	Acanthochromis_polyacanthus
ENSMZEG00005005627	scrt1b	100	95.714	ENSACIG00000013613	scrt1b	100	95.714	Amphilophus_citrinellus
ENSMZEG00005005627	scrt1b	99	76.333	ENSACIG00000006586	-	99	76.333	Amphilophus_citrinellus
ENSMZEG00005005627	scrt1b	96	57.143	ENSACIG00000001296	-	96	57.143	Amphilophus_citrinellus
ENSMZEG00005005627	scrt1b	96	69.203	ENSACIG00000012604	scrt2	96	69.203	Amphilophus_citrinellus
ENSMZEG00005005627	scrt1b	100	98.929	ENSAOCG00000003910	scrt1b	100	98.929	Amphiprion_ocellaris
ENSMZEG00005005627	scrt1b	99	76.333	ENSAOCG00000023304	-	99	76.333	Amphiprion_ocellaris
ENSMZEG00005005627	scrt1b	96	70.290	ENSAOCG00000021557	scrt2	96	70.290	Amphiprion_ocellaris
ENSMZEG00005005627	scrt1b	100	98.571	ENSAPEG00000000869	scrt1b	100	98.571	Amphiprion_percula
ENSMZEG00005005627	scrt1b	96	70.290	ENSAPEG00000022558	scrt2	96	70.290	Amphiprion_percula
ENSMZEG00005005627	scrt1b	99	76.333	ENSAPEG00000005677	-	99	76.333	Amphiprion_percula
ENSMZEG00005005627	scrt1b	96	65.049	ENSATEG00000023998	scrt2	97	65.049	Anabas_testudineus
ENSMZEG00005005627	scrt1b	96	54.952	ENSATEG00000003195	-	97	54.952	Anabas_testudineus
ENSMZEG00005005627	scrt1b	99	76.923	ENSATEG00000011660	-	99	76.923	Anabas_testudineus
ENSMZEG00005005627	scrt1b	100	96.786	ENSATEG00000002302	scrt1b	100	96.786	Anabas_testudineus
ENSMZEG00005005627	scrt1b	76	76.526	ENSACAG00000016109	SCRT2	95	76.526	Anolis_carolinensis
ENSMZEG00005005627	scrt1b	100	100.000	ENSACLG00000007162	scrt1b	100	100.000	Astatotilapia_calliptera
ENSMZEG00005005627	scrt1b	99	73.597	ENSACLG00000012046	-	99	73.597	Astatotilapia_calliptera
ENSMZEG00005005627	scrt1b	98	83.453	ENSAMXG00000042624	SCRT1	99	83.453	Astyanax_mexicanus
ENSMZEG00005005627	scrt1b	100	83.214	ENSAMXG00000038085	scrt1a	100	84.342	Astyanax_mexicanus
ENSMZEG00005005627	scrt1b	82	74.370	ENSAMXG00000034158	scrt2	86	74.370	Astyanax_mexicanus
ENSMZEG00005005627	scrt1b	58	62.346	WBGene00000468	ces-1	60	61.585	Caenorhabditis_elegans
ENSMZEG00005005627	scrt1b	99	83.929	ENSCPBG00000018899	SCRT1	99	83.929	Chrysemys_picta_bellii
ENSMZEG00005005627	scrt1b	86	62.151	ENSCPBG00000027613	SCRT2	100	62.151	Chrysemys_picta_bellii
ENSMZEG00005005627	scrt1b	88	51.626	ENSCGRG00000001380	Scrt2	100	51.626	Cricetulus_griseus_crigri
ENSMZEG00005005627	scrt1b	98	76.094	ENSCSEG00000014892	-	98	76.094	Cynoglossus_semilaevis
ENSMZEG00005005627	scrt1b	100	96.786	ENSCSEG00000008596	scrt1b	100	96.786	Cynoglossus_semilaevis
ENSMZEG00005005627	scrt1b	96	66.997	ENSCSEG00000021542	scrt2	96	66.997	Cynoglossus_semilaevis
ENSMZEG00005005627	scrt1b	96	64.194	ENSCVAG00000021038	scrt2	97	64.194	Cyprinodon_variegatus
ENSMZEG00005005627	scrt1b	100	96.429	ENSCVAG00000009561	scrt1b	100	96.429	Cyprinodon_variegatus
ENSMZEG00005005627	scrt1b	99	76.000	ENSCVAG00000003190	-	99	76.000	Cyprinodon_variegatus
ENSMZEG00005005627	scrt1b	100	86.477	ENSDARG00000100821	scrt1a	100	86.477	Danio_rerio
ENSMZEG00005005627	scrt1b	100	86.121	ENSDARG00000040214	scrt1b	100	86.121	Danio_rerio
ENSMZEG00005005627	scrt1b	99	88.129	ENSELUG00000005435	scrt1b	99	88.129	Esox_lucius
ENSMZEG00005005627	scrt1b	97	66.333	ENSELUG00000023883	scrt2	96	66.333	Esox_lucius
ENSMZEG00005005627	scrt1b	99	87.143	ENSELUG00000022228	scrt1a	99	87.143	Esox_lucius
ENSMZEG00005005627	scrt1b	83	71.983	ENSFALG00000005718	SCRT2	96	71.983	Ficedula_albicollis
ENSMZEG00005005627	scrt1b	96	62.868	ENSFDAG00000008733	SCRT1	97	62.868	Fukomys_damarensis
ENSMZEG00005005627	scrt1b	96	71.014	ENSFHEG00000005732	scrt2	96	71.014	Fundulus_heteroclitus
ENSMZEG00005005627	scrt1b	99	76.667	ENSFHEG00000009794	-	99	76.667	Fundulus_heteroclitus
ENSMZEG00005005627	scrt1b	100	97.500	ENSFHEG00000014820	scrt1b	100	97.500	Fundulus_heteroclitus
ENSMZEG00005005627	scrt1b	96	61.165	ENSGMOG00000019519	scrt2	95	61.165	Gadus_morhua
ENSMZEG00005005627	scrt1b	57	93.548	ENSGMOG00000013833	-	54	93.548	Gadus_morhua
ENSMZEG00005005627	scrt1b	99	92.473	ENSGMOG00000000629	scrt1b	100	92.473	Gadus_morhua
ENSMZEG00005005627	scrt1b	96	65.074	ENSGALG00000028912	SCRT2	97	65.201	Gallus_gallus
ENSMZEG00005005627	scrt1b	96	67.568	ENSGAFG00000003093	scrt2	96	67.568	Gambusia_affinis
ENSMZEG00005005627	scrt1b	100	96.786	ENSGAFG00000007636	scrt1b	100	96.786	Gambusia_affinis
ENSMZEG00005005627	scrt1b	99	76.241	ENSGAFG00000009650	-	99	76.241	Gambusia_affinis
ENSMZEG00005005627	scrt1b	99	93.907	ENSGACG00000008982	scrt1b	99	93.907	Gasterosteus_aculeatus
ENSMZEG00005005627	scrt1b	99	75.000	ENSGACG00000004072	-	99	75.000	Gasterosteus_aculeatus
ENSMZEG00005005627	scrt1b	65	79.459	ENSGAGG00000020760	-	71	79.459	Gopherus_agassizii
ENSMZEG00005005627	scrt1b	96	65.441	ENSGAGG00000020761	SCRT2	96	65.441	Gopherus_agassizii
ENSMZEG00005005627	scrt1b	99	84.532	ENSGAGG00000011736	SCRT1	100	84.532	Gopherus_agassizii
ENSMZEG00005005627	scrt1b	99	76.000	ENSHBUG00000019101	-	99	76.000	Haplochromis_burtoni
ENSMZEG00005005627	scrt1b	100	100.000	ENSHBUG00000016621	scrt1b	100	100.000	Haplochromis_burtoni
ENSMZEG00005005627	scrt1b	96	69.928	ENSHBUG00000012492	scrt2	96	69.928	Haplochromis_burtoni
ENSMZEG00005005627	scrt1b	100	95.000	ENSHCOG00000016704	scrt1b	100	95.000	Hippocampus_comes
ENSMZEG00005005627	scrt1b	96	66.553	ENSHCOG00000008116	scrt2	96	66.553	Hippocampus_comes
ENSMZEG00005005627	scrt1b	99	68.621	ENSHCOG00000016179	-	99	68.621	Hippocampus_comes
ENSMZEG00005005627	scrt1b	98	78.909	ENSIPUG00000005547	-	99	78.909	Ictalurus_punctatus
ENSMZEG00005005627	scrt1b	99	85.305	ENSIPUG00000004551	scrt1a	99	85.305	Ictalurus_punctatus
ENSMZEG00005005627	scrt1b	50	85.106	ENSSTOG00000032944	SCRT2	84	80.255	Ictidomys_tridecemlineatus
ENSMZEG00005005627	scrt1b	100	97.500	ENSKMAG00000005484	scrt1b	100	97.500	Kryptolebias_marmoratus
ENSMZEG00005005627	scrt1b	99	74.000	ENSKMAG00000009489	-	99	75.667	Kryptolebias_marmoratus
ENSMZEG00005005627	scrt1b	96	64.725	ENSKMAG00000018087	scrt2	97	64.725	Kryptolebias_marmoratus
ENSMZEG00005005627	scrt1b	96	64.516	ENSLBEG00000015419	scrt2	97	64.516	Labrus_bergylta
ENSMZEG00005005627	scrt1b	99	74.832	ENSLBEG00000023388	-	99	75.503	Labrus_bergylta
ENSMZEG00005005627	scrt1b	100	84.698	ENSLACG00000003588	SCRT1	99	84.698	Latimeria_chalumnae
ENSMZEG00005005627	scrt1b	96	55.663	ENSLOCG00000002246	scrt2	97	55.663	Lepisosteus_oculatus
ENSMZEG00005005627	scrt1b	100	89.324	ENSLOCG00000007573	scrt1b	100	89.324	Lepisosteus_oculatus
ENSMZEG00005005627	scrt1b	96	94.074	ENSMFAG00000035496	SCRT1	71	88.158	Macaca_fascicularis
ENSMZEG00005005627	scrt1b	96	64.401	ENSMAMG00000001291	scrt2	97	64.401	Mastacembelus_armatus
ENSMZEG00005005627	scrt1b	100	97.857	ENSMAMG00000011698	scrt1b	100	97.857	Mastacembelus_armatus
ENSMZEG00005005627	scrt1b	99	76.000	ENSMZEG00005026702	-	99	76.000	Maylandia_zebra
ENSMZEG00005005627	scrt1b	96	69.928	ENSMZEG00005026445	scrt2	96	69.928	Maylandia_zebra
ENSMZEG00005005627	scrt1b	83	70.563	ENSMGAG00000016579	SCRT2	96	70.563	Meleagris_gallopavo
ENSMZEG00005005627	scrt1b	96	65.359	ENSMMOG00000009272	scrt2	97	65.359	Mola_mola
ENSMZEG00005005627	scrt1b	100	95.357	ENSMMOG00000003327	scrt1b	100	95.357	Mola_mola
ENSMZEG00005005627	scrt1b	99	75.667	ENSMMOG00000018345	-	99	75.667	Mola_mola
ENSMZEG00005005627	scrt1b	96	68.592	ENSMALG00000013656	scrt2	96	68.592	Monopterus_albus
ENSMZEG00005005627	scrt1b	100	97.857	ENSMALG00000012704	scrt1b	100	97.857	Monopterus_albus
ENSMZEG00005005627	scrt1b	96	53.532	ENSNGAG00000020815	Scrt2	99	53.047	Nannospalax_galili
ENSMZEG00005005627	scrt1b	99	75.667	ENSNBRG00000014882	-	99	75.667	Neolamprologus_brichardi
ENSMZEG00005005627	scrt1b	96	69.565	ENSNBRG00000007221	scrt2	96	69.565	Neolamprologus_brichardi
ENSMZEG00005005627	scrt1b	100	94.643	ENSNBRG00000013983	scrt1b	100	94.643	Neolamprologus_brichardi
ENSMZEG00005005627	scrt1b	100	99.286	ENSONIG00000006007	scrt1b	100	99.286	Oreochromis_niloticus
ENSMZEG00005005627	scrt1b	96	64.401	ENSONIG00000016758	scrt2	97	64.401	Oreochromis_niloticus
ENSMZEG00005005627	scrt1b	96	72.222	ENSONIG00000019809	-	99	72.222	Oreochromis_niloticus
ENSMZEG00005005627	scrt1b	96	61.372	ENSONIG00000003152	-	96	61.372	Oreochromis_niloticus
ENSMZEG00005005627	scrt1b	99	74.419	ENSORLG00000022825	-	99	74.419	Oryzias_latipes
ENSMZEG00005005627	scrt1b	100	96.071	ENSORLG00000025651	scrt1b	100	96.071	Oryzias_latipes
ENSMZEG00005005627	scrt1b	96	64.725	ENSORLG00000024051	scrt2	97	64.725	Oryzias_latipes
ENSMZEG00005005627	scrt1b	100	96.071	ENSORLG00020012967	scrt1b	100	96.071	Oryzias_latipes_hni
ENSMZEG00005005627	scrt1b	96	64.725	ENSORLG00020011478	scrt2	97	64.725	Oryzias_latipes_hni
ENSMZEG00005005627	scrt1b	100	96.071	ENSORLG00015019165	scrt1b	100	96.071	Oryzias_latipes_hsok
ENSMZEG00005005627	scrt1b	96	64.725	ENSORLG00015005524	scrt2	97	64.725	Oryzias_latipes_hsok
ENSMZEG00005005627	scrt1b	99	74.751	ENSORLG00015010104	-	99	74.751	Oryzias_latipes_hsok
ENSMZEG00005005627	scrt1b	99	76.589	ENSOMEG00000000286	-	99	76.589	Oryzias_melastigma
ENSMZEG00005005627	scrt1b	96	65.049	ENSOMEG00000002661	scrt2	97	65.049	Oryzias_melastigma
ENSMZEG00005005627	scrt1b	100	96.071	ENSOMEG00000003925	scrt1b	100	96.071	Oryzias_melastigma
ENSMZEG00005005627	scrt1b	100	86.121	ENSPKIG00000020085	scrt1a	100	86.121	Paramormyrops_kingsleyae
ENSMZEG00005005627	scrt1b	100	87.900	ENSPKIG00000022303	SCRT1	100	87.900	Paramormyrops_kingsleyae
ENSMZEG00005005627	scrt1b	96	70.036	ENSPMGG00000016561	scrt2	96	70.036	Periophthalmus_magnuspinnatus
ENSMZEG00005005627	scrt1b	100	92.143	ENSPMGG00000002260	scrt1b	100	92.143	Periophthalmus_magnuspinnatus
ENSMZEG00005005627	scrt1b	99	74.237	ENSPMGG00000021402	-	99	74.237	Periophthalmus_magnuspinnatus
ENSMZEG00005005627	scrt1b	99	76.431	ENSPFOG00000005616	-	99	76.431	Poecilia_formosa
ENSMZEG00005005627	scrt1b	100	96.786	ENSPFOG00000017719	scrt1b	100	96.786	Poecilia_formosa
ENSMZEG00005005627	scrt1b	96	64.516	ENSPFOG00000007738	scrt2	97	64.516	Poecilia_formosa
ENSMZEG00005005627	scrt1b	99	76.431	ENSPLAG00000011718	-	99	76.431	Poecilia_latipinna
ENSMZEG00005005627	scrt1b	96	70.758	ENSPLAG00000005765	scrt2	96	70.758	Poecilia_latipinna
ENSMZEG00005005627	scrt1b	100	96.786	ENSPLAG00000009876	scrt1b	100	96.786	Poecilia_latipinna
ENSMZEG00005005627	scrt1b	99	76.431	ENSPMEG00000011706	-	99	76.431	Poecilia_mexicana
ENSMZEG00005005627	scrt1b	100	96.786	ENSPMEG00000013274	scrt1b	100	96.786	Poecilia_mexicana
ENSMZEG00005005627	scrt1b	96	70.758	ENSPMEG00000001538	scrt2	96	70.758	Poecilia_mexicana
ENSMZEG00005005627	scrt1b	99	75.758	ENSPREG00000012166	-	99	75.758	Poecilia_reticulata
ENSMZEG00005005627	scrt1b	100	96.786	ENSPREG00000018985	scrt1b	100	96.786	Poecilia_reticulata
ENSMZEG00005005627	scrt1b	96	64.516	ENSPREG00000001147	scrt2	97	64.516	Poecilia_reticulata
ENSMZEG00005005627	scrt1b	100	100.000	ENSPNYG00000017733	scrt1b	100	100.000	Pundamilia_nyererei
ENSMZEG00005005627	scrt1b	96	69.928	ENSPNYG00000013109	scrt2	96	69.928	Pundamilia_nyererei
ENSMZEG00005005627	scrt1b	99	76.000	ENSPNYG00000008865	-	99	76.000	Pundamilia_nyererei
ENSMZEG00005005627	scrt1b	98	84.116	ENSPNAG00000027880	-	99	84.116	Pygocentrus_nattereri
ENSMZEG00005005627	scrt1b	100	85.409	ENSPNAG00000017415	scrt1a	100	85.409	Pygocentrus_nattereri
ENSMZEG00005005627	scrt1b	100	86.833	ENSSFOG00015001195	SCRT1	100	86.833	Scleropages_formosus
ENSMZEG00005005627	scrt1b	99	74.834	ENSSMAG00000005122	-	99	74.834	Scophthalmus_maximus
ENSMZEG00005005627	scrt1b	99	95.699	ENSSMAG00000019207	scrt1b	99	95.699	Scophthalmus_maximus
ENSMZEG00005005627	scrt1b	98	65.436	ENSSDUG00000001637	scrt2	96	65.436	Seriola_dumerili
ENSMZEG00005005627	scrt1b	99	77.000	ENSSDUG00000013215	-	99	77.000	Seriola_dumerili
ENSMZEG00005005627	scrt1b	100	98.929	ENSSDUG00000007752	scrt1b	100	98.929	Seriola_dumerili
ENSMZEG00005005627	scrt1b	100	98.929	ENSSLDG00000017166	scrt1b	100	98.929	Seriola_lalandi_dorsalis
ENSMZEG00005005627	scrt1b	99	77.000	ENSSLDG00000016454	-	99	77.000	Seriola_lalandi_dorsalis
ENSMZEG00005005627	scrt1b	96	64.401	ENSSLDG00000013565	scrt2	97	64.401	Seriola_lalandi_dorsalis
ENSMZEG00005005627	scrt1b	96	66.790	ENSSPUG00000018637	SCRT2	97	66.790	Sphenodon_punctatus
ENSMZEG00005005627	scrt1b	96	70.290	ENSSPAG00000014018	scrt2	96	70.290	Stegastes_partitus
ENSMZEG00005005627	scrt1b	100	98.929	ENSSPAG00000002200	scrt1b	100	98.929	Stegastes_partitus
ENSMZEG00005005627	scrt1b	99	75.000	ENSSPAG00000006788	-	99	76.667	Stegastes_partitus
ENSMZEG00005005627	scrt1b	83	71.861	ENSTGUG00000006801	SCRT2	99	71.861	Taeniopygia_guttata
ENSMZEG00005005627	scrt1b	86	77.869	ENSTRUG00000019558	-	81	77.869	Takifugu_rubripes
ENSMZEG00005005627	scrt1b	99	75.503	ENSTRUG00000012719	-	99	75.503	Takifugu_rubripes
ENSMZEG00005005627	scrt1b	96	67.698	ENSTRUG00000007620	scrt2	96	67.698	Takifugu_rubripes
ENSMZEG00005005627	scrt1b	98	94.545	ENSTRUG00000011637	scrt1b	99	94.545	Takifugu_rubripes
ENSMZEG00005005627	scrt1b	100	94.643	ENSTNIG00000018384	scrt1b	100	94.643	Tetraodon_nigroviridis
ENSMZEG00005005627	scrt1b	96	70.609	ENSTNIG00000012473	scrt2	97	70.609	Tetraodon_nigroviridis
ENSMZEG00005005627	scrt1b	96	67.905	ENSXCOG00000014367	scrt2	96	67.905	Xiphophorus_couchianus
ENSMZEG00005005627	scrt1b	100	96.429	ENSXCOG00000019675	scrt1b	100	96.429	Xiphophorus_couchianus
ENSMZEG00005005627	scrt1b	99	74.823	ENSXCOG00000019861	-	99	74.823	Xiphophorus_couchianus
ENSMZEG00005005627	scrt1b	100	96.429	ENSXMAG00000027885	scrt1b	100	96.429	Xiphophorus_maculatus
ENSMZEG00005005627	scrt1b	99	76.094	ENSXMAG00000015353	-	99	76.094	Xiphophorus_maculatus
ENSMZEG00005005627	scrt1b	96	64.839	ENSXMAG00000028567	scrt2	97	64.839	Xiphophorus_maculatus