EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005663 (Gene tree)
Gene ID: 101471642
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 15020 bases
Position: chrAGTA05000028.1:81431-96450
Accession: 101471642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007418	AARP2CN	PF08142.12	4.6e-32	1	1
ENSMZEP00005007436	AARP2CN	PF08142.12	5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007727	-	5386	XM_004570382	ENSMZEP00005007418	1200 (aa)	XP_004570439	UPI000D2F5D42
ENSMZET00005007746	-	3582	-	ENSMZEP00005007436	1193 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005005663's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005663	bms1	99	61.330	ENSG00000165733	BMS1	87	68.571	Homo_sapiens
ENSMZEG00005005663	bms1	88	82.281	ENSAPOG00000002296	bms1	100	81.792	Acanthochromis_polyacanthus
ENSMZEG00005005663	bms1	99	62.152	ENSAMEG00000016834	BMS1	97	61.200	Ailuropoda_melanoleuca
ENSMZEG00005005663	bms1	99	84.127	ENSACIG00000002588	bms1	100	82.864	Amphilophus_citrinellus
ENSMZEG00005005663	bms1	100	82.937	ENSAOCG00000018088	bms1	100	82.841	Amphiprion_ocellaris
ENSMZEG00005005663	bms1	100	83.155	ENSAPEG00000014673	bms1	100	83.059	Amphiprion_percula
ENSMZEG00005005663	bms1	100	81.618	ENSATEG00000023465	bms1	100	82.108	Anabas_testudineus
ENSMZEG00005005663	bms1	90	70.547	ENSAPLG00000003759	BMS1	86	70.775	Anas_platyrhynchos
ENSMZEG00005005663	bms1	98	66.021	ENSACAG00000004537	-	87	69.614	Anolis_carolinensis
ENSMZEG00005005663	bms1	96	67.943	ENSANAG00000023432	BMS1	87	67.761	Aotus_nancymaae
ENSMZEG00005005663	bms1	100	99.833	ENSACLG00000001294	bms1	100	99.833	Astatotilapia_calliptera
ENSMZEG00005005663	bms1	93	76.645	ENSAMXG00000011236	bms1	97	69.951	Astyanax_mexicanus
ENSMZEG00005005663	bms1	99	60.725	ENSBTAG00000012878	BMS1	87	69.293	Bos_taurus
ENSMZEG00005005663	bms1	85	54.523	WBGene00022021	Y61A9LA.10	93	57.300	Caenorhabditis_elegans
ENSMZEG00005005663	bms1	97	67.334	ENSCJAG00000021705	BMS1	87	67.943	Callithrix_jacchus
ENSMZEG00005005663	bms1	99	61.792	ENSCAFG00000007114	BMS1	87	67.710	Canis_familiaris
ENSMZEG00005005663	bms1	99	61.792	ENSCAFG00020025282	BMS1	87	67.710	Canis_lupus_dingo
ENSMZEG00005005663	bms1	54	66.924	ENSCHIG00000023251	BMS1	87	68.750	Capra_hircus
ENSMZEG00005005663	bms1	99	58.327	ENSCAPG00000008652	BMS1	93	63.760	Cavia_aperea
ENSMZEG00005005663	bms1	99	61.258	ENSCPOG00000000502	BMS1	93	65.430	Cavia_porcellus
ENSMZEG00005005663	bms1	99	62.008	ENSCATG00000030625	-	88	67.723	Cercocebus_atys
ENSMZEG00005005663	bms1	89	47.800	ENSCATG00000008695	-	77	58.407	Cercocebus_atys
ENSMZEG00005005663	bms1	99	61.485	ENSCLAG00000002446	BMS1	92	67.391	Chinchilla_lanigera
ENSMZEG00005005663	bms1	97	68.000	ENSCSAG00000011118	BMS1	87	68.254	Chlorocebus_sabaeus
ENSMZEG00005005663	bms1	99	60.974	ENSCHOG00000011055	BMS1	87	66.934	Choloepus_hoffmanni
ENSMZEG00005005663	bms1	98	66.292	ENSCPBG00000025581	BMS1	94	64.877	Chrysemys_picta_bellii
ENSMZEG00005005663	bms1	83	62.720	ENSCING00000003181	-	95	64.021	Ciona_intestinalis
ENSMZEG00005005663	bms1	55	71.255	ENSCSAVG00000004113	-	88	53.103	Ciona_savignyi
ENSMZEG00005005663	bms1	99	62.500	ENSCANG00000011609	BMS1	88	68.431	Colobus_angolensis_palliatus
ENSMZEG00005005663	bms1	98	62.618	ENSCGRG00001019461	Bms1	93	66.992	Cricetulus_griseus_chok1gshd
ENSMZEG00005005663	bms1	98	62.618	ENSCGRG00000009016	Bms1	93	66.992	Cricetulus_griseus_crigri
ENSMZEG00005005663	bms1	100	75.080	ENSCSEG00000002469	bms1	100	75.020	Cynoglossus_semilaevis
ENSMZEG00005005663	bms1	100	79.436	ENSCVAG00000008371	bms1	100	79.187	Cyprinodon_variegatus
ENSMZEG00005005663	bms1	99	71.867	ENSDARG00000054154	bms1	99	72.809	Danio_rerio
ENSMZEG00005005663	bms1	99	60.153	ENSDNOG00000015761	BMS1	87	67.059	Dasypus_novemcinctus
ENSMZEG00005005663	bms1	95	68.750	ENSDORG00000002982	Bms1	97	60.754	Dipodomys_ordii
ENSMZEG00005005663	bms1	88	61.501	FBgn0036686	CG7728	96	63.904	Drosophila_melanogaster
ENSMZEG00005005663	bms1	84	67.857	ENSETEG00000009554	BMS1	77	67.857	Echinops_telfairi
ENSMZEG00005005663	bms1	99	61.806	ENSEASG00005006894	BMS1	97	61.679	Equus_asinus_asinus
ENSMZEG00005005663	bms1	99	62.154	ENSECAG00000001358	BMS1	97	61.216	Equus_caballus
ENSMZEG00005005663	bms1	100	71.867	ENSELUG00000001756	bms1	99	72.787	Esox_lucius
ENSMZEG00005005663	bms1	99	62.269	ENSFCAG00000011220	BMS1	87	68.269	Felis_catus
ENSMZEG00005005663	bms1	99	64.834	ENSFALG00000006882	BMS1	85	69.231	Ficedula_albicollis
ENSMZEG00005005663	bms1	99	65.926	ENSFDAG00000001422	BMS1	92	66.012	Fukomys_damarensis
ENSMZEG00005005663	bms1	100	80.514	ENSFHEG00000003367	bms1	100	79.551	Fundulus_heteroclitus
ENSMZEG00005005663	bms1	99	71.201	ENSGMOG00000000718	bms1	99	69.951	Gadus_morhua
ENSMZEG00005005663	bms1	99	64.971	ENSGALG00000002624	BMS1	86	68.530	Gallus_gallus
ENSMZEG00005005663	bms1	99	80.128	ENSGACG00000015334	bms1	89	80.128	Gasterosteus_aculeatus
ENSMZEG00005005663	bms1	98	64.679	ENSGAGG00000003467	BMS1	93	68.211	Gopherus_agassizii
ENSMZEG00005005663	bms1	100	99.583	ENSHBUG00000022628	bms1	100	99.583	Haplochromis_burtoni
ENSMZEG00005005663	bms1	99	62.053	ENSHGLG00000000477	BMS1	88	67.949	Heterocephalus_glaber_female
ENSMZEG00005005663	bms1	99	62.053	ENSHGLG00100002176	BMS1	88	67.949	Heterocephalus_glaber_male
ENSMZEG00005005663	bms1	99	78.075	ENSHCOG00000017604	bms1	99	77.975	Hippocampus_comes
ENSMZEG00005005663	bms1	97	82.303	ENSIPUG00000017855	bms1	99	70.730	Ictalurus_punctatus
ENSMZEG00005005663	bms1	99	61.794	ENSSTOG00000015063	BMS1	88	67.773	Ictidomys_tridecemlineatus
ENSMZEG00005005663	bms1	54	66.309	ENSJJAG00000017328	Bms1	88	66.667	Jaculus_jaculus
ENSMZEG00005005663	bms1	65	76.184	ENSKMAG00000021982	bms1	97	75.288	Kryptolebias_marmoratus
ENSMZEG00005005663	bms1	100	77.659	ENSLBEG00000028208	bms1	100	78.383	Labrus_bergylta
ENSMZEG00005005663	bms1	54	57.207	ENSLACG00000001600	BMS1	87	65.784	Latimeria_chalumnae
ENSMZEG00005005663	bms1	97	70.823	ENSLOCG00000012914	bms1	97	71.512	Lepisosteus_oculatus
ENSMZEG00005005663	bms1	99	66.542	ENSLAFG00000006250	BMS1	87	67.446	Loxodonta_africana
ENSMZEG00005005663	bms1	88	66.923	ENSMFAG00000037771	BMS1	96	67.921	Macaca_fascicularis
ENSMZEG00005005663	bms1	87	62.338	ENSMMUG00000007426	-	85	62.863	Macaca_mulatta
ENSMZEG00005005663	bms1	82	53.876	ENSMLEG00000029084	-	77	57.326	Mandrillus_leucophaeus
ENSMZEG00005005663	bms1	100	80.791	ENSMAMG00000020855	bms1	100	79.487	Mastacembelus_armatus
ENSMZEG00005005663	bms1	90	69.502	ENSMGAG00000001170	BMS1	87	69.071	Meleagris_gallopavo
ENSMZEG00005005663	bms1	98	62.461	ENSMAUG00000002195	Bms1	93	66.211	Mesocricetus_auratus
ENSMZEG00005005663	bms1	99	66.309	ENSMICG00000009977	BMS1	87	67.520	Microcebus_murinus
ENSMZEG00005005663	bms1	98	65.067	ENSMOCG00000002038	Bms1	87	67.308	Microtus_ochrogaster
ENSMZEG00005005663	bms1	100	79.039	ENSMMOG00000000977	bms1	100	77.427	Mola_mola
ENSMZEG00005005663	bms1	99	62.166	ENSMODG00000001177	BMS1	86	70.096	Monodelphis_domestica
ENSMZEG00005005663	bms1	100	81.090	ENSMALG00000009680	bms1	100	80.929	Monopterus_albus
ENSMZEG00005005663	bms1	72	76.709	MGP_CAROLIEiJ_G0028785	-	74	78.307	Mus_caroli
ENSMZEG00005005663	bms1	98	60.873	ENSMUSG00000030138	Bms1	88	65.385	Mus_musculus
ENSMZEG00005005663	bms1	98	61.042	MGP_PahariEiJ_G0022539	Bms1	92	66.996	Mus_pahari
ENSMZEG00005005663	bms1	98	60.703	MGP_SPRETEiJ_G0029816	Bms1	88	65.680	Mus_spretus
ENSMZEG00005005663	bms1	99	62.315	ENSMPUG00000017276	BMS1	97	61.200	Mustela_putorius_furo
ENSMZEG00005005663	bms1	99	61.694	ENSMLUG00000003260	BMS1	88	67.641	Myotis_lucifugus
ENSMZEG00005005663	bms1	99	56.924	ENSNGAG00000015258	Bms1	97	57.250	Nannospalax_galili
ENSMZEG00005005663	bms1	99	60.712	ENSNLEG00000015791	BMS1	87	68.173	Nomascus_leucogenys
ENSMZEG00005005663	bms1	85	77.586	ENSOPRG00000005195	BMS1	77	79.733	Ochotona_princeps
ENSMZEG00005005663	bms1	99	65.794	ENSODEG00000005554	BMS1	93	66.148	Octodon_degus
ENSMZEG00005005663	bms1	100	96.924	ENSONIG00000007227	bms1	100	96.924	Oreochromis_niloticus
ENSMZEG00005005663	bms1	99	60.046	ENSOANG00000000662	-	87	67.147	Ornithorhynchus_anatinus
ENSMZEG00005005663	bms1	95	68.910	ENSOCUG00000005354	BMS1	88	67.525	Oryctolagus_cuniculus
ENSMZEG00005005663	bms1	99	79.000	ENSORLG00000014655	bms1	99	79.149	Oryzias_latipes
ENSMZEG00005005663	bms1	99	74.918	ENSORLG00020016246	bms1	99	75.760	Oryzias_latipes_hni
ENSMZEG00005005663	bms1	99	75.862	ENSORLG00015014183	bms1	99	76.284	Oryzias_latipes_hsok
ENSMZEG00005005663	bms1	99	79.651	ENSOMEG00000015042	bms1	99	79.536	Oryzias_melastigma
ENSMZEG00005005663	bms1	98	66.729	ENSOGAG00000006511	BMS1	86	68.262	Otolemur_garnettii
ENSMZEG00005005663	bms1	99	60.015	ENSOARG00000003900	BMS1	87	68.200	Ovis_aries
ENSMZEG00005005663	bms1	99	58.810	ENSPPAG00000027837	BMS1	87	67.787	Pan_paniscus
ENSMZEG00005005663	bms1	99	61.971	ENSPPRG00000001311	BMS1	87	68.269	Panthera_pardus
ENSMZEG00005005663	bms1	99	61.158	ENSPTIG00000009652	BMS1	87	67.780	Panthera_tigris_altaica
ENSMZEG00005005663	bms1	99	61.562	ENSPTRG00000002441	BMS1	87	68.730	Pan_troglodytes
ENSMZEG00005005663	bms1	97	75.879	ENSPKIG00000008165	bms1	90	77.476	Paramormyrops_kingsleyae
ENSMZEG00005005663	bms1	95	67.296	ENSPSIG00000006481	BMS1	86	68.438	Pelodiscus_sinensis
ENSMZEG00005005663	bms1	98	56.143	ENSPEMG00000022467	Bms1	87	66.798	Peromyscus_maniculatus_bairdii
ENSMZEG00005005663	bms1	98	64.925	ENSPCIG00000001339	BMS1	85	74.648	Phascolarctos_cinereus
ENSMZEG00005005663	bms1	97	81.350	ENSPFOG00000015180	bms1	99	77.281	Poecilia_formosa
ENSMZEG00005005663	bms1	99	78.369	ENSPMEG00000023176	bms1	94	78.952	Poecilia_mexicana
ENSMZEG00005005663	bms1	99	78.619	ENSPREG00000002695	bms1	99	78.560	Poecilia_reticulata
ENSMZEG00005005663	bms1	58	56.401	ENSPPYG00000002836	-	79	68.359	Pongo_abelii
ENSMZEG00005005663	bms1	72	76.190	ENSPCAG00000014528	BMS1	70	76.190	Procavia_capensis
ENSMZEG00005005663	bms1	93	67.089	ENSPCOG00000023834	-	88	65.988	Propithecus_coquereli
ENSMZEG00005005663	bms1	99	61.586	ENSPVAG00000000725	BMS1	88	67.788	Pteropus_vampyrus
ENSMZEG00005005663	bms1	100	95.833	ENSPNYG00000018866	bms1	99	97.797	Pundamilia_nyererei
ENSMZEG00005005663	bms1	54	76.324	ENSPNAG00000000676	bms1	97	71.082	Pygocentrus_nattereri
ENSMZEG00005005663	bms1	80	60.701	ENSRNOG00000006576	Bms1	86	67.456	Rattus_norvegicus
ENSMZEG00005005663	bms1	99	60.849	ENSRROG00000040101	BMS1	97	59.421	Rhinopithecus_roxellana
ENSMZEG00005005663	bms1	80	45.508	YPL217C	-	73	55.301	Saccharomyces_cerevisiae
ENSMZEG00005005663	bms1	99	61.467	ENSSBOG00000035778	BMS1	88	68.262	Saimiri_boliviensis_boliviensis
ENSMZEG00005005663	bms1	99	65.356	ENSSHAG00000005062	BMS1	88	67.829	Sarcophilus_harrisii
ENSMZEG00005005663	bms1	98	75.969	ENSSFOG00015022313	bms1	99	69.623	Scleropages_formosus
ENSMZEG00005005663	bms1	100	78.710	ENSSMAG00000019966	bms1	100	79.032	Scophthalmus_maximus
ENSMZEG00005005663	bms1	100	81.301	ENSSDUG00000016875	bms1	100	81.220	Seriola_dumerili
ENSMZEG00005005663	bms1	100	80.744	ENSSLDG00000015199	bms1	100	81.634	Seriola_lalandi_dorsalis
ENSMZEG00005005663	bms1	66	62.830	ENSSARG00000014407	BMS1	86	60.904	Sorex_araneus
ENSMZEG00005005663	bms1	99	68.489	ENSSPUG00000014454	BMS1	88	68.359	Sphenodon_punctatus
ENSMZEG00005005663	bms1	99	62.239	ENSSSCG00000010198	BMS1	87	68.008	Sus_scrofa
ENSMZEG00005005663	bms1	95	69.887	ENSTGUG00000006302	-	85	69.231	Taeniopygia_guttata
ENSMZEG00005005663	bms1	99	71.000	ENSTRUG00000008028	bms1	99	70.657	Takifugu_rubripes
ENSMZEG00005005663	bms1	99	73.194	ENSTNIG00000006216	bms1	89	74.318	Tetraodon_nigroviridis
ENSMZEG00005005663	bms1	65	71.333	ENSTBEG00000001673	-	63	70.707	Tupaia_belangeri
ENSMZEG00005005663	bms1	99	61.604	ENSTTRG00000007983	BMS1	86	68.218	Tursiops_truncatus
ENSMZEG00005005663	bms1	99	62.112	ENSUAMG00000023996	BMS1	97	61.464	Ursus_americanus
ENSMZEG00005005663	bms1	99	61.957	ENSUMAG00000016523	BMS1	97	61.384	Ursus_maritimus
ENSMZEG00005005663	bms1	82	71.789	ENSVPAG00000007477	BMS1	81	73.203	Vicugna_pacos
ENSMZEG00005005663	bms1	99	67.797	ENSVVUG00000021305	BMS1	97	62.408	Vulpes_vulpes
ENSMZEG00005005663	bms1	98	61.855	ENSXETG00000008158	bms1	99	62.069	Xenopus_tropicalis
ENSMZEG00005005663	bms1	99	76.096	ENSXCOG00000000506	bms1	95	87.407	Xiphophorus_couchianus
ENSMZEG00005005663	bms1	99	77.658	ENSXMAG00000014236	bms1	99	78.065	Xiphophorus_maculatus