EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005698 (Gene tree)
Gene ID: 101487798
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 27905 bases
Position: chrLG19:8304868-8332772
Accession: 101487798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007444	RRM_1	PF00076.22	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007754	SCAF8-201	7394	XM_004566517	ENSMZEP00005007444	1353 (aa)	XP_004566574	UPI000D31D431

Gene Model

Click here to download ENSMZEG00005005698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005698	SCAF8	80	68.659	ENSG00000213079	SCAF8	86	69.062	Homo_sapiens
ENSMZEG00005005698	SCAF8	100	84.876	ENSAPOG00000015527	SCAF8	100	84.664	Acanthochromis_polyacanthus
ENSMZEG00005005698	SCAF8	80	66.471	ENSAMEG00000007583	SCAF8	84	67.057	Ailuropoda_melanoleuca
ENSMZEG00005005698	SCAF8	100	84.567	ENSAOCG00000002421	SCAF8	100	84.144	Amphiprion_ocellaris
ENSMZEG00005005698	SCAF8	98	74.945	ENSAPEG00000020115	SCAF8	68	70.620	Amphiprion_percula
ENSMZEG00005005698	SCAF8	79	85.373	ENSATEG00000006959	SCAF8	95	85.397	Anabas_testudineus
ENSMZEG00005005698	SCAF8	80	63.723	ENSAPLG00000005765	SCAF8	91	63.821	Anas_platyrhynchos
ENSMZEG00005005698	SCAF8	80	68.780	ENSANAG00000036184	SCAF8	86	69.184	Aotus_nancymaae
ENSMZEG00005005698	SCAF8	100	99.852	ENSACLG00000018828	SCAF8	100	99.852	Astatotilapia_calliptera
ENSMZEG00005005698	SCAF8	80	68.029	ENSBTAG00000031917	SCAF8	87	68.630	Bos_taurus
ENSMZEG00005005698	SCAF8	80	69.024	ENSCJAG00000012631	SCAF8	84	67.696	Callithrix_jacchus
ENSMZEG00005005698	SCAF8	79	68.005	ENSCAFG00000000570	SCAF8	87	68.613	Canis_familiaris
ENSMZEG00005005698	SCAF8	79	68.005	ENSCAFG00020015048	SCAF8	85	68.613	Canis_lupus_dingo
ENSMZEG00005005698	SCAF8	80	68.269	ENSCHIG00000025041	SCAF8	88	68.870	Capra_hircus
ENSMZEG00005005698	SCAF8	80	68.537	ENSTSYG00000010991	SCAF8	85	68.819	Carlito_syrichta
ENSMZEG00005005698	SCAF8	59	72.000	ENSCAPG00000003300	SCAF8	70	72.000	Cavia_aperea
ENSMZEG00005005698	SCAF8	80	50.629	ENSCPOG00000030311	-	59	41.724	Cavia_porcellus
ENSMZEG00005005698	SCAF8	79	50.461	ENSCPOG00000022216	-	87	58.374	Cavia_porcellus
ENSMZEG00005005698	SCAF8	80	68.780	ENSCCAG00000024952	SCAF8	86	69.306	Cebus_capucinus
ENSMZEG00005005698	SCAF8	80	68.902	ENSCATG00000035361	SCAF8	86	69.306	Cercocebus_atys
ENSMZEG00005005698	SCAF8	80	67.805	ENSCLAG00000004910	SCAF8	86	68.681	Chinchilla_lanigera
ENSMZEG00005005698	SCAF8	80	67.182	ENSCSAG00000013430	SCAF8	87	67.577	Chlorocebus_sabaeus
ENSMZEG00005005698	SCAF8	80	63.789	ENSCPBG00000016330	SCAF8	80	71.040	Chrysemys_picta_bellii
ENSMZEG00005005698	SCAF8	80	68.902	ENSCANG00000039499	SCAF8	86	69.174	Colobus_angolensis_palliatus
ENSMZEG00005005698	SCAF8	77	72.775	ENSCGRG00001020167	Scaf8	82	73.037	Cricetulus_griseus_chok1gshd
ENSMZEG00005005698	SCAF8	76	72.583	ENSCGRG00000004120	Scaf8	82	72.848	Cricetulus_griseus_crigri
ENSMZEG00005005698	SCAF8	100	76.945	ENSCSEG00000000043	-	100	77.257	Cynoglossus_semilaevis
ENSMZEG00005005698	SCAF8	96	74.115	ENSCVAG00000000925	SCAF8	99	74.410	Cyprinodon_variegatus
ENSMZEG00005005698	SCAF8	76	66.754	ENSDNOG00000025271	SCAF8	85	67.188	Dasypus_novemcinctus
ENSMZEG00005005698	SCAF8	79	68.121	ENSDORG00000006391	Scaf8	87	68.364	Dipodomys_ordii
ENSMZEG00005005698	SCAF8	80	67.453	ENSEASG00005018879	SCAF8	88	68.042	Equus_asinus_asinus
ENSMZEG00005005698	SCAF8	80	68.106	ENSECAG00000005540	SCAF8	87	68.705	Equus_caballus
ENSMZEG00005005698	SCAF8	78	72.317	ENSELUG00000002779	SCAF8	100	60.832	Esox_lucius
ENSMZEG00005005698	SCAF8	80	68.970	ENSFCAG00000023424	SCAF8	87	69.111	Felis_catus
ENSMZEG00005005698	SCAF8	77	71.558	ENSFALG00000012433	SCAF8	87	68.599	Ficedula_albicollis
ENSMZEG00005005698	SCAF8	80	67.888	ENSFDAG00000010335	SCAF8	86	68.293	Fukomys_damarensis
ENSMZEG00005005698	SCAF8	100	76.207	ENSFHEG00000008284	SCAF8	100	76.814	Fundulus_heteroclitus
ENSMZEG00005005698	SCAF8	67	79.550	ENSGMOG00000018812	SCAF8	83	79.550	Gadus_morhua
ENSMZEG00005005698	SCAF8	79	64.624	ENSGALG00000013635	SCAF8	89	64.301	Gallus_gallus
ENSMZEG00005005698	SCAF8	100	76.241	ENSGAFG00000018033	SCAF8	100	77.021	Gambusia_affinis
ENSMZEG00005005698	SCAF8	80	81.294	ENSGACG00000006909	SCAF8	99	81.534	Gasterosteus_aculeatus
ENSMZEG00005005698	SCAF8	80	68.659	ENSGGOG00000008645	SCAF8	86	69.062	Gorilla_gorilla
ENSMZEG00005005698	SCAF8	100	99.335	ENSHBUG00000019537	SCAF8	100	99.335	Haplochromis_burtoni
ENSMZEG00005005698	SCAF8	80	68.498	ENSHGLG00000003619	SCAF8	87	68.902	Heterocephalus_glaber_female
ENSMZEG00005005698	SCAF8	79	68.356	ENSHGLG00100004708	SCAF8	87	68.765	Heterocephalus_glaber_male
ENSMZEG00005005698	SCAF8	79	68.765	ENSSTOG00000026043	SCAF8	87	68.697	Ictidomys_tridecemlineatus
ENSMZEG00005005698	SCAF8	78	68.447	ENSJJAG00000020480	Scaf8	86	69.053	Jaculus_jaculus
ENSMZEG00005005698	SCAF8	100	81.429	ENSKMAG00000012767	SCAF8	100	81.357	Kryptolebias_marmoratus
ENSMZEG00005005698	SCAF8	85	96.269	ENSLBEG00000012484	-	92	93.289	Labrus_bergylta
ENSMZEG00005005698	SCAF8	80	64.619	ENSLOCG00000016856	SCAF8	91	65.453	Lepisosteus_oculatus
ENSMZEG00005005698	SCAF8	77	72.549	ENSLAFG00000000022	SCAF8	82	72.644	Loxodonta_africana
ENSMZEG00005005698	SCAF8	80	68.902	ENSMFAG00000032738	SCAF8	86	69.306	Macaca_fascicularis
ENSMZEG00005005698	SCAF8	80	68.902	ENSMMUG00000015163	SCAF8	86	69.306	Macaca_mulatta
ENSMZEG00005005698	SCAF8	80	68.902	ENSMNEG00000043466	SCAF8	86	69.306	Macaca_nemestrina
ENSMZEG00005005698	SCAF8	79	68.765	ENSMLEG00000034845	SCAF8	86	69.174	Mandrillus_leucophaeus
ENSMZEG00005005698	SCAF8	96	78.540	ENSMAMG00000009457	SCAF8	100	79.270	Mastacembelus_armatus
ENSMZEG00005005698	SCAF8	79	70.581	ENSMGAG00000012762	SCAF8	85	70.210	Meleagris_gallopavo
ENSMZEG00005005698	SCAF8	77	72.812	ENSMAUG00000009513	Scaf8	85	70.250	Mesocricetus_auratus
ENSMZEG00005005698	SCAF8	80	56.039	ENSMICG00000028965	SCAF8	88	67.765	Microcebus_murinus
ENSMZEG00005005698	SCAF8	78	72.513	ENSMOCG00000014950	Scaf8	82	72.775	Microtus_ochrogaster
ENSMZEG00005005698	SCAF8	78	85.322	ENSMMOG00000002216	SCAF8	99	77.899	Mola_mola
ENSMZEG00005005698	SCAF8	78	69.837	ENSMODG00000008301	SCAF8	83	70.088	Monodelphis_domestica
ENSMZEG00005005698	SCAF8	100	81.625	ENSMALG00000011584	SCAF8	100	81.837	Monopterus_albus
ENSMZEG00005005698	SCAF8	78	72.251	MGP_CAROLIEiJ_G0021016	Scaf8	82	72.775	Mus_caroli
ENSMZEG00005005698	SCAF8	78	72.251	ENSMUSG00000046201	Scaf8	82	72.775	Mus_musculus
ENSMZEG00005005698	SCAF8	80	72.644	MGP_PahariEiJ_G0023334	Scaf8	82	73.168	Mus_pahari
ENSMZEG00005005698	SCAF8	77	70.064	ENSMPUG00000001974	SCAF8	83	70.701	Mustela_putorius_furo
ENSMZEG00005005698	SCAF8	79	68.719	ENSMLUG00000029190	SCAF8	84	69.335	Myotis_lucifugus
ENSMZEG00005005698	SCAF8	80	68.826	ENSNGAG00000012332	Scaf8	87	69.231	Nannospalax_galili
ENSMZEG00005005698	SCAF8	87	98.507	ENSNBRG00000009067	SCAF8	99	98.507	Neolamprologus_brichardi
ENSMZEG00005005698	SCAF8	80	67.072	ENSNLEG00000015509	SCAF8	86	67.322	Nomascus_leucogenys
ENSMZEG00005005698	SCAF8	58	77.320	ENSOPRG00000018413	-	72	77.320	Ochotona_princeps
ENSMZEG00005005698	SCAF8	80	68.864	ENSODEG00000007296	SCAF8	86	69.268	Octodon_degus
ENSMZEG00005005698	SCAF8	89	96.970	ENSONIG00000008119	SCAF8	99	96.970	Oreochromis_niloticus
ENSMZEG00005005698	SCAF8	79	68.408	ENSOCUG00000026063	SCAF8	86	68.894	Oryctolagus_cuniculus
ENSMZEG00005005698	SCAF8	100	78.448	ENSORLG00000017358	SCAF8	100	78.879	Oryzias_latipes
ENSMZEG00005005698	SCAF8	100	78.530	ENSORLG00020002214	SCAF8	100	78.818	Oryzias_latipes_hni
ENSMZEG00005005698	SCAF8	100	78.807	ENSORLG00015015779	SCAF8	100	79.167	Oryzias_latipes_hsok
ENSMZEG00005005698	SCAF8	100	78.725	ENSOMEG00000015471	SCAF8	100	79.226	Oryzias_melastigma
ENSMZEG00005005698	SCAF8	80	66.865	ENSOGAG00000034223	SCAF8	84	67.102	Otolemur_garnettii
ENSMZEG00005005698	SCAF8	79	67.922	ENSOARG00000004159	SCAF8	88	68.530	Ovis_aries
ENSMZEG00005005698	SCAF8	80	68.659	ENSPPAG00000039826	SCAF8	86	69.062	Pan_paniscus
ENSMZEG00005005698	SCAF8	80	68.630	ENSPPRG00000023175	SCAF8	87	69.231	Panthera_pardus
ENSMZEG00005005698	SCAF8	79	68.491	ENSPTIG00000014836	SCAF8	86	69.100	Panthera_tigris_altaica
ENSMZEG00005005698	SCAF8	80	68.780	ENSPTRG00000018727	SCAF8	86	69.184	Pan_troglodytes
ENSMZEG00005005698	SCAF8	80	68.902	ENSPANG00000017489	SCAF8	86	66.504	Papio_anubis
ENSMZEG00005005698	SCAF8	80	70.942	ENSPKIG00000021212	SCAF8	92	72.232	Paramormyrops_kingsleyae
ENSMZEG00005005698	SCAF8	69	65.813	ENSPSIG00000008614	SCAF8	70	65.964	Pelodiscus_sinensis
ENSMZEG00005005698	SCAF8	76	72.149	ENSPEMG00000010531	Scaf8	82	72.414	Peromyscus_maniculatus_bairdii
ENSMZEG00005005698	SCAF8	80	70.334	ENSPCIG00000001141	SCAF8	87	70.581	Phascolarctos_cinereus
ENSMZEG00005005698	SCAF8	87	92.010	ENSPFOG00000004176	SCAF8	92	92.010	Poecilia_formosa
ENSMZEG00005005698	SCAF8	100	77.234	ENSPLAG00000021432	SCAF8	100	77.817	Poecilia_latipinna
ENSMZEG00005005698	SCAF8	100	76.738	ENSPMEG00000007591	SCAF8	100	77.463	Poecilia_mexicana
ENSMZEG00005005698	SCAF8	100	76.879	ENSPREG00000000652	SCAF8	100	77.605	Poecilia_reticulata
ENSMZEG00005005698	SCAF8	80	67.762	ENSPPYG00000017121	SCAF8	86	67.679	Pongo_abelii
ENSMZEG00005005698	SCAF8	66	81.104	ENSPCAG00000013044	SCAF8	74	81.271	Procavia_capensis
ENSMZEG00005005698	SCAF8	80	67.529	ENSPCOG00000002067	SCAF8	87	67.857	Propithecus_coquereli
ENSMZEG00005005698	SCAF8	80	68.389	ENSPVAG00000005582	SCAF8	88	68.510	Pteropus_vampyrus
ENSMZEG00005005698	SCAF8	100	99.704	ENSPNYG00000007277	SCAF8	100	99.704	Pundamilia_nyererei
ENSMZEG00005005698	SCAF8	82	72.355	ENSPNAG00000024740	SCAF8	83	73.145	Pygocentrus_nattereri
ENSMZEG00005005698	SCAF8	78	72.251	ENSRNOG00000016919	Scaf8	82	72.775	Rattus_norvegicus
ENSMZEG00005005698	SCAF8	80	68.902	ENSRBIG00000035769	SCAF8	86	69.306	Rhinopithecus_bieti
ENSMZEG00005005698	SCAF8	80	68.780	ENSRROG00000013580	SCAF8	86	69.184	Rhinopithecus_roxellana
ENSMZEG00005005698	SCAF8	80	68.780	ENSSBOG00000027023	SCAF8	86	69.184	Saimiri_boliviensis_boliviensis
ENSMZEG00005005698	SCAF8	80	69.468	ENSSHAG00000009915	SCAF8	86	69.839	Sarcophilus_harrisii
ENSMZEG00005005698	SCAF8	79	64.538	ENSSFOG00015009481	SCAF8	57	58.149	Scleropages_formosus
ENSMZEG00005005698	SCAF8	79	88.015	ENSSMAG00000008275	SCAF8	100	80.139	Scophthalmus_maximus
ENSMZEG00005005698	SCAF8	80	70.186	ENSSPUG00000015219	SCAF8	82	70.186	Sphenodon_punctatus
ENSMZEG00005005698	SCAF8	80	67.211	ENSSSCG00000004070	SCAF8	88	67.995	Sus_scrofa
ENSMZEG00005005698	SCAF8	79	69.975	ENSTGUG00000011151	SCAF8	85	70.352	Taeniopygia_guttata
ENSMZEG00005005698	SCAF8	100	76.978	ENSTRUG00000009243	SCAF8	100	76.907	Takifugu_rubripes
ENSMZEG00005005698	SCAF8	80	81.934	ENSTNIG00000016885	SCAF8	99	81.877	Tetraodon_nigroviridis
ENSMZEG00005005698	SCAF8	79	66.505	ENSTTRG00000014538	SCAF8	85	68.867	Tursiops_truncatus
ENSMZEG00005005698	SCAF8	80	68.269	ENSUAMG00000024736	SCAF8	86	68.735	Ursus_americanus
ENSMZEG00005005698	SCAF8	78	67.658	ENSUMAG00000013404	SCAF8	86	68.278	Ursus_maritimus
ENSMZEG00005005698	SCAF8	58	60.250	ENSVPAG00000012465	SCAF8	84	87.387	Vicugna_pacos
ENSMZEG00005005698	SCAF8	79	68.642	ENSVVUG00000007532	SCAF8	87	68.780	Vulpes_vulpes
ENSMZEG00005005698	SCAF8	73	70.087	ENSXETG00000013132	scaf8	81	67.072	Xenopus_tropicalis
ENSMZEG00005005698	SCAF8	100	76.989	ENSXMAG00000019192	SCAF8	100	77.344	Xiphophorus_maculatus