EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005705 (Gene tree)
Gene ID: 101483512
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 3496 bases
Position: chrLG4:7753876-7757371
Accession: 101483512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007457	RNA_pol_Rpb6	PF01192.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007768	-	1754	XM_004563056	ENSMZEP00005007457	127 (aa)	XP_004563113	UPI00032A1E2A

Gene Model

Click here to download ENSMZEG00005005705's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03020	RNA polymerase	KEGG
mze04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005705	polr2f	100	89.764	ENSG00000100142	POLR2F	100	89.764	Homo_sapiens
ENSMZEG00005005705	polr2f	100	97.638	ENSAPOG00000002902	polr2f	100	97.638	Acanthochromis_polyacanthus
ENSMZEG00005005705	polr2f	100	88.976	ENSAMEG00000010331	POLR2F	100	88.976	Ailuropoda_melanoleuca
ENSMZEG00005005705	polr2f	100	99.213	ENSACIG00000000923	polr2f	100	99.213	Amphilophus_citrinellus
ENSMZEG00005005705	polr2f	100	98.425	ENSAOCG00000003182	polr2f	100	98.425	Amphiprion_ocellaris
ENSMZEG00005005705	polr2f	100	98.425	ENSAPEG00000012999	polr2f	100	98.425	Amphiprion_percula
ENSMZEG00005005705	polr2f	100	99.213	ENSATEG00000008929	polr2f	100	99.213	Anabas_testudineus
ENSMZEG00005005705	polr2f	80	90.099	ENSAPLG00000015235	POLR2F	85	89.623	Anas_platyrhynchos
ENSMZEG00005005705	polr2f	100	90.551	ENSACAG00000015288	POLR2F	100	90.551	Anolis_carolinensis
ENSMZEG00005005705	polr2f	100	89.764	ENSANAG00000020840	POLR2F	100	89.764	Aotus_nancymaae
ENSMZEG00005005705	polr2f	100	100.000	ENSACLG00000016129	polr2f	100	100.000	Astatotilapia_calliptera
ENSMZEG00005005705	polr2f	100	96.850	ENSAMXG00000012812	polr2f	100	96.850	Astyanax_mexicanus
ENSMZEG00005005705	polr2f	100	89.764	ENSBTAG00000004820	POLR2F	100	89.764	Bos_taurus
ENSMZEG00005005705	polr2f	63	77.500	WBGene00007355	rpb-6	73	68.317	Caenorhabditis_elegans
ENSMZEG00005005705	polr2f	100	89.764	ENSCJAG00000048241	POLR2F	100	89.764	Callithrix_jacchus
ENSMZEG00005005705	polr2f	100	88.976	ENSCAFG00000001437	POLR2F	100	88.976	Canis_familiaris
ENSMZEG00005005705	polr2f	83	90.566	ENSCHIG00000012907	POLR2F	83	90.566	Capra_hircus
ENSMZEG00005005705	polr2f	100	88.976	ENSTSYG00000008187	POLR2F	100	88.976	Carlito_syrichta
ENSMZEG00005005705	polr2f	83	90.566	ENSCAPG00000013419	POLR2F	83	90.566	Cavia_aperea
ENSMZEG00005005705	polr2f	100	89.764	ENSCPOG00000034094	POLR2F	100	89.764	Cavia_porcellus
ENSMZEG00005005705	polr2f	100	89.764	ENSCCAG00000036489	POLR2F	100	89.764	Cebus_capucinus
ENSMZEG00005005705	polr2f	100	89.764	ENSCATG00000041014	POLR2F	100	89.764	Cercocebus_atys
ENSMZEG00005005705	polr2f	100	89.764	ENSCLAG00000017167	POLR2F	100	89.764	Chinchilla_lanigera
ENSMZEG00005005705	polr2f	100	89.764	ENSCSAG00000006862	POLR2F	100	89.764	Chlorocebus_sabaeus
ENSMZEG00005005705	polr2f	83	91.509	ENSCPBG00000023030	POLR2F	54	91.509	Chrysemys_picta_bellii
ENSMZEG00005005705	polr2f	78	76.000	ENSCING00000019359	-	71	76.000	Ciona_intestinalis
ENSMZEG00005005705	polr2f	100	89.764	ENSCANG00000041884	POLR2F	100	89.764	Colobus_angolensis_palliatus
ENSMZEG00005005705	polr2f	100	89.764	ENSCGRG00001023541	POLR2F	100	89.764	Cricetulus_griseus_chok1gshd
ENSMZEG00005005705	polr2f	100	89.764	ENSCGRG00000011921	POLR2F	100	89.764	Cricetulus_griseus_crigri
ENSMZEG00005005705	polr2f	95	97.521	ENSCSEG00000006848	polr2f	95	97.521	Cynoglossus_semilaevis
ENSMZEG00005005705	polr2f	100	96.850	ENSCVAG00000010437	polr2f	100	96.850	Cyprinodon_variegatus
ENSMZEG00005005705	polr2f	100	94.488	ENSDARG00000036625	polr2f	100	94.488	Danio_rerio
ENSMZEG00005005705	polr2f	100	89.764	ENSDNOG00000005884	POLR2F	100	89.764	Dasypus_novemcinctus
ENSMZEG00005005705	polr2f	100	89.764	ENSDORG00000024789	Polr2f	100	89.764	Dipodomys_ordii
ENSMZEG00005005705	polr2f	63	85.000	FBgn0003275	RpII18	74	75.258	Drosophila_melanogaster
ENSMZEG00005005705	polr2f	54	83.824	ENSEBUG00000008509	polr2f	70	83.824	Eptatretus_burgeri
ENSMZEG00005005705	polr2f	77	68.367	ENSEBUG00000002842	-	90	65.385	Eptatretus_burgeri
ENSMZEG00005005705	polr2f	60	88.158	ENSEASG00005018802	-	68	88.158	Equus_asinus_asinus
ENSMZEG00005005705	polr2f	100	87.402	ENSEEUG00000011014	POLR2F	100	87.402	Erinaceus_europaeus
ENSMZEG00005005705	polr2f	100	96.063	ENSELUG00000000319	polr2f	100	96.063	Esox_lucius
ENSMZEG00005005705	polr2f	100	88.976	ENSFCAG00000002806	POLR2F	100	88.976	Felis_catus
ENSMZEG00005005705	polr2f	100	89.764	ENSFDAG00000009926	POLR2F	100	89.764	Fukomys_damarensis
ENSMZEG00005005705	polr2f	88	96.429	ENSFHEG00000005448	polr2f	84	96.226	Fundulus_heteroclitus
ENSMZEG00005005705	polr2f	100	88.189	ENSGMOG00000009967	polr2f	100	88.189	Gadus_morhua
ENSMZEG00005005705	polr2f	100	88.976	ENSGALG00000012291	POLR2F	100	88.976	Gallus_gallus
ENSMZEG00005005705	polr2f	100	96.063	ENSGAFG00000017573	polr2f	100	96.063	Gambusia_affinis
ENSMZEG00005005705	polr2f	100	93.701	ENSGACG00000007322	polr2f	100	93.701	Gasterosteus_aculeatus
ENSMZEG00005005705	polr2f	100	90.551	ENSGAGG00000021757	POLR2F	100	90.551	Gopherus_agassizii
ENSMZEG00005005705	polr2f	100	89.764	ENSGGOG00000005213	POLR2F	100	89.764	Gorilla_gorilla
ENSMZEG00005005705	polr2f	100	100.000	ENSHBUG00000022089	polr2f	100	100.000	Haplochromis_burtoni
ENSMZEG00005005705	polr2f	100	89.764	ENSHGLG00000018942	POLR2F	100	89.764	Heterocephalus_glaber_female
ENSMZEG00005005705	polr2f	100	89.764	ENSHGLG00100012851	POLR2F	100	89.764	Heterocephalus_glaber_male
ENSMZEG00005005705	polr2f	100	96.063	ENSHCOG00000006149	polr2f	100	96.063	Hippocampus_comes
ENSMZEG00005005705	polr2f	76	97.938	ENSIPUG00000000814	polr2f	100	97.938	Ictalurus_punctatus
ENSMZEG00005005705	polr2f	100	89.764	ENSSTOG00000025722	POLR2F	100	89.764	Ictidomys_tridecemlineatus
ENSMZEG00005005705	polr2f	100	89.764	ENSJJAG00000008097	Polr2f	100	89.764	Jaculus_jaculus
ENSMZEG00005005705	polr2f	100	97.638	ENSKMAG00000014230	polr2f	100	97.638	Kryptolebias_marmoratus
ENSMZEG00005005705	polr2f	94	95.833	ENSLBEG00000008383	polr2f	100	95.833	Labrus_bergylta
ENSMZEG00005005705	polr2f	100	92.126	ENSLACG00000003931	POLR2F	100	92.126	Latimeria_chalumnae
ENSMZEG00005005705	polr2f	100	95.385	ENSLOCG00000011827	polr2f	100	95.385	Lepisosteus_oculatus
ENSMZEG00005005705	polr2f	100	89.764	ENSLAFG00000012632	POLR2F	100	89.764	Loxodonta_africana
ENSMZEG00005005705	polr2f	100	89.764	ENSMFAG00000033687	POLR2F	100	89.764	Macaca_fascicularis
ENSMZEG00005005705	polr2f	83	90.566	ENSMMUG00000038231	POLR2F	87	90.566	Macaca_mulatta
ENSMZEG00005005705	polr2f	100	89.764	ENSMNEG00000044365	POLR2F	100	89.764	Macaca_nemestrina
ENSMZEG00005005705	polr2f	100	89.764	ENSMLEG00000033077	POLR2F	100	89.764	Mandrillus_leucophaeus
ENSMZEG00005005705	polr2f	100	98.425	ENSMAMG00000008056	polr2f	100	98.425	Mastacembelus_armatus
ENSMZEG00005005705	polr2f	100	88.976	ENSMGAG00000012504	POLR2F	100	88.976	Meleagris_gallopavo
ENSMZEG00005005705	polr2f	100	89.764	ENSMAUG00000018586	Polr2f	100	89.764	Mesocricetus_auratus
ENSMZEG00005005705	polr2f	100	89.764	ENSMICG00000013128	POLR2F	100	89.764	Microcebus_murinus
ENSMZEG00005005705	polr2f	100	89.764	ENSMOCG00000000237	Polr2f	100	89.764	Microtus_ochrogaster
ENSMZEG00005005705	polr2f	100	98.425	ENSMMOG00000005106	polr2f	100	98.425	Mola_mola
ENSMZEG00005005705	polr2f	100	88.976	ENSMODG00000019063	POLR2F	100	88.976	Monodelphis_domestica
ENSMZEG00005005705	polr2f	100	97.638	ENSMALG00000001444	polr2f	100	97.638	Monopterus_albus
ENSMZEG00005005705	polr2f	100	88.976	MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	Mus_caroli
ENSMZEG00005005705	polr2f	100	88.976	ENSMUSG00000033020	Polr2f	100	88.976	Mus_musculus
ENSMZEG00005005705	polr2f	100	88.976	MGP_PahariEiJ_G0020008	Polr2f	100	88.976	Mus_pahari
ENSMZEG00005005705	polr2f	100	88.976	MGP_SPRETEiJ_G0020904	Polr2f	100	88.976	Mus_spretus
ENSMZEG00005005705	polr2f	100	88.976	ENSMPUG00000012997	POLR2F	100	88.976	Mustela_putorius_furo
ENSMZEG00005005705	polr2f	98	83.871	ENSMLUG00000029612	-	98	83.871	Myotis_lucifugus
ENSMZEG00005005705	polr2f	100	87.597	ENSMLUG00000014315	-	100	87.597	Myotis_lucifugus
ENSMZEG00005005705	polr2f	100	89.764	ENSNGAG00000020682	Polr2f	100	89.764	Nannospalax_galili
ENSMZEG00005005705	polr2f	100	99.213	ENSNBRG00000002492	polr2f	100	99.213	Neolamprologus_brichardi
ENSMZEG00005005705	polr2f	100	89.764	ENSNLEG00000014987	-	100	89.764	Nomascus_leucogenys
ENSMZEG00005005705	polr2f	100	89.764	ENSODEG00000014123	POLR2F	100	89.764	Octodon_degus
ENSMZEG00005005705	polr2f	100	99.213	ENSONIG00000008394	polr2f	100	99.213	Oreochromis_niloticus
ENSMZEG00005005705	polr2f	100	90.551	ENSOANG00000014684	POLR2F	100	90.551	Ornithorhynchus_anatinus
ENSMZEG00005005705	polr2f	100	89.764	ENSOCUG00000012064	POLR2F	100	89.764	Oryctolagus_cuniculus
ENSMZEG00005005705	polr2f	100	96.063	ENSORLG00000014580	polr2f	100	96.063	Oryzias_latipes
ENSMZEG00005005705	polr2f	100	96.850	ENSORLG00020006910	polr2f	100	96.850	Oryzias_latipes_hni
ENSMZEG00005005705	polr2f	90	94.737	ENSORLG00015015332	polr2f	77	94.737	Oryzias_latipes_hsok
ENSMZEG00005005705	polr2f	80	94.118	ENSOMEG00000006530	polr2f	65	88.182	Oryzias_melastigma
ENSMZEG00005005705	polr2f	100	89.764	ENSOGAG00000025463	POLR2F	100	89.764	Otolemur_garnettii
ENSMZEG00005005705	polr2f	100	89.764	ENSOARG00000014692	POLR2F	100	89.764	Ovis_aries
ENSMZEG00005005705	polr2f	100	89.764	ENSPPAG00000024276	POLR2F	100	89.764	Pan_paniscus
ENSMZEG00005005705	polr2f	100	88.976	ENSPPRG00000013030	POLR2F	100	88.976	Panthera_pardus
ENSMZEG00005005705	polr2f	82	90.385	ENSPTIG00000000632	POLR2F	85	90.385	Panthera_tigris_altaica
ENSMZEG00005005705	polr2f	100	89.764	ENSPTRG00000014356	POLR2F	100	89.764	Pan_troglodytes
ENSMZEG00005005705	polr2f	100	89.764	ENSPANG00000023979	POLR2F	100	89.764	Papio_anubis
ENSMZEG00005005705	polr2f	100	96.850	ENSPKIG00000002464	polr2f	100	96.850	Paramormyrops_kingsleyae
ENSMZEG00005005705	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSMZEG00005005705	polr2f	100	98.425	ENSPMGG00000009619	polr2f	100	98.425	Periophthalmus_magnuspinnatus
ENSMZEG00005005705	polr2f	100	89.764	ENSPEMG00000008322	Polr2f	100	89.764	Peromyscus_maniculatus_bairdii
ENSMZEG00005005705	polr2f	100	88.976	ENSPCIG00000012000	-	100	88.976	Phascolarctos_cinereus
ENSMZEG00005005705	polr2f	100	96.850	ENSPFOG00000000139	polr2f	100	96.850	Poecilia_formosa
ENSMZEG00005005705	polr2f	100	96.850	ENSPLAG00000000988	polr2f	100	96.850	Poecilia_latipinna
ENSMZEG00005005705	polr2f	100	96.850	ENSPMEG00000019063	polr2f	100	96.850	Poecilia_mexicana
ENSMZEG00005005705	polr2f	77	96.939	ENSPREG00000016749	polr2f	100	96.939	Poecilia_reticulata
ENSMZEG00005005705	polr2f	100	89.764	ENSPPYG00000011809	POLR2F	100	89.764	Pongo_abelii
ENSMZEG00005005705	polr2f	100	89.764	ENSPCOG00000025716	POLR2F	100	89.764	Propithecus_coquereli
ENSMZEG00005005705	polr2f	79	87.000	ENSPVAG00000010107	POLR2F	64	87.000	Pteropus_vampyrus
ENSMZEG00005005705	polr2f	100	100.000	ENSPNYG00000019790	polr2f	100	100.000	Pundamilia_nyererei
ENSMZEG00005005705	polr2f	100	97.638	ENSPNAG00000009017	polr2f	100	97.638	Pygocentrus_nattereri
ENSMZEG00005005705	polr2f	100	88.976	ENSRNOG00000011214	Polr2f	100	88.976	Rattus_norvegicus
ENSMZEG00005005705	polr2f	100	89.764	ENSRBIG00000044878	POLR2F	100	89.764	Rhinopithecus_bieti
ENSMZEG00005005705	polr2f	100	89.764	ENSRROG00000019586	POLR2F	100	89.764	Rhinopithecus_roxellana
ENSMZEG00005005705	polr2f	98	50.327	YPR187W	RPO26	65	63.366	Saccharomyces_cerevisiae
ENSMZEG00005005705	polr2f	100	89.764	ENSSBOG00000023340	POLR2F	100	89.764	Saimiri_boliviensis_boliviensis
ENSMZEG00005005705	polr2f	100	88.976	ENSSHAG00000008502	POLR2F	100	88.976	Sarcophilus_harrisii
ENSMZEG00005005705	polr2f	100	99.213	ENSSFOG00015012810	polr2f	100	99.213	Scleropages_formosus
ENSMZEG00005005705	polr2f	100	97.638	ENSSMAG00000005354	polr2f	100	97.638	Scophthalmus_maximus
ENSMZEG00005005705	polr2f	100	98.425	ENSSDUG00000016273	polr2f	100	98.425	Seriola_dumerili
ENSMZEG00005005705	polr2f	100	98.425	ENSSLDG00000024895	polr2f	100	98.425	Seriola_lalandi_dorsalis
ENSMZEG00005005705	polr2f	100	90.551	ENSSPUG00000011343	POLR2F	100	90.551	Sphenodon_punctatus
ENSMZEG00005005705	polr2f	100	100.000	ENSSPAG00000019646	polr2f	100	100.000	Stegastes_partitus
ENSMZEG00005005705	polr2f	100	88.976	ENSSSCG00000000116	POLR2F	100	88.976	Sus_scrofa
ENSMZEG00005005705	polr2f	80	91.089	ENSTGUG00000010476	POLR2F	93	89.764	Taeniopygia_guttata
ENSMZEG00005005705	polr2f	57	90.278	ENSTGUG00000016504	-	88	89.610	Taeniopygia_guttata
ENSMZEG00005005705	polr2f	100	97.638	ENSTRUG00000021130	polr2f	71	97.638	Takifugu_rubripes
ENSMZEG00005005705	polr2f	100	97.638	ENSTNIG00000010827	polr2f	100	97.638	Tetraodon_nigroviridis
ENSMZEG00005005705	polr2f	79	87.000	ENSTTRG00000004817	POLR2F	64	87.000	Tursiops_truncatus
ENSMZEG00005005705	polr2f	100	88.976	ENSUAMG00000020504	POLR2F	100	88.976	Ursus_americanus
ENSMZEG00005005705	polr2f	100	88.976	ENSUMAG00000015052	POLR2F	100	88.976	Ursus_maritimus
ENSMZEG00005005705	polr2f	83	89.623	ENSVVUG00000024021	POLR2F	80	89.623	Vulpes_vulpes
ENSMZEG00005005705	polr2f	100	91.339	ENSXETG00000006346	polr2f	100	91.339	Xenopus_tropicalis
ENSMZEG00005005705	polr2f	100	96.850	ENSXCOG00000015983	polr2f	100	96.850	Xiphophorus_couchianus
ENSMZEG00005005705	polr2f	100	96.850	ENSXMAG00000001559	polr2f	100	96.850	Xiphophorus_maculatus