EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005719 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2446 bases
Position: chrLG7:52021951-52024396
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007476	RRM_1	PF00076.22	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007787	-	555	-	ENSMZEP00005007476	184 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005005719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005719	srek1	95	78.889	ENSG00000153914	SREK1	97	67.532	Homo_sapiens
ENSMZEG00005005719	srek1	99	88.235	ENSACIG00000015041	srek1	99	88.235	Amphilophus_citrinellus
ENSMZEG00005005719	srek1	96	78.142	ENSANAG00000031358	SREK1	92	78.142	Aotus_nancymaae
ENSMZEG00005005719	srek1	100	100.000	ENSACLG00000026754	srek1	63	100.000	Astatotilapia_calliptera
ENSMZEG00005005719	srek1	96	78.142	ENSCJAG00000015950	SREK1	92	78.142	Callithrix_jacchus
ENSMZEG00005005719	srek1	94	74.302	ENSCAFG00020019448	-	90	74.302	Canis_lupus_dingo
ENSMZEG00005005719	srek1	96	78.689	ENSTSYG00000036957	SREK1	92	78.689	Carlito_syrichta
ENSMZEG00005005719	srek1	98	77.419	ENSCATG00000031482	SREK1	92	78.142	Cercocebus_atys
ENSMZEG00005005719	srek1	95	78.889	ENSCPBG00000026866	SREK1	53	78.090	Chrysemys_picta_bellii
ENSMZEG00005005719	srek1	96	78.142	ENSCANG00000030421	SREK1	92	78.142	Colobus_angolensis_palliatus
ENSMZEG00005005719	srek1	99	89.011	ENSCVAG00000002411	srek1	88	89.011	Cyprinodon_variegatus
ENSMZEG00005005719	srek1	96	78.142	ENSDORG00000023425	-	92	78.142	Dipodomys_ordii
ENSMZEG00005005719	srek1	96	78.142	ENSEASG00005006829	-	92	78.142	Equus_asinus_asinus
ENSMZEG00005005719	srek1	96	78.142	ENSECAG00000036994	-	92	78.142	Equus_caballus
ENSMZEG00005005719	srek1	71	75.912	ENSGALG00000043541	SREK1	53	75.912	Gallus_gallus
ENSMZEG00005005719	srek1	98	77.419	ENSGGOG00000004737	SREK1	92	78.142	Gorilla_gorilla
ENSMZEG00005005719	srek1	100	100.000	ENSHBUG00000007057	srek1	100	100.000	Haplochromis_burtoni
ENSMZEG00005005719	srek1	96	81.356	ENSHCOG00000017240	SREK1	53	81.356	Hippocampus_comes
ENSMZEG00005005719	srek1	96	78.689	ENSJJAG00000000214	-	92	78.689	Jaculus_jaculus
ENSMZEG00005005719	srek1	97	88.764	ENSLBEG00000022980	srek1	90	88.764	Labrus_bergylta
ENSMZEG00005005719	srek1	98	77.419	ENSMFAG00000039823	SREK1	92	78.142	Macaca_fascicularis
ENSMZEG00005005719	srek1	98	77.419	ENSMNEG00000030723	SREK1	92	78.142	Macaca_nemestrina
ENSMZEG00005005719	srek1	98	77.419	ENSMLEG00000039078	SREK1	92	78.142	Mandrillus_leucophaeus
ENSMZEG00005005719	srek1	69	75.000	ENSMGAG00000002047	SREK1	68	66.286	Meleagris_gallopavo
ENSMZEG00005005719	srek1	95	76.667	ENSMAUG00000010066	-	57	78.333	Mesocricetus_auratus
ENSMZEG00005005719	srek1	96	78.142	ENSMICG00000034959	SREK1	92	78.142	Microcebus_murinus
ENSMZEG00005005719	srek1	95	76.667	ENSMOCG00000001536	-	56	78.333	Microtus_ochrogaster
ENSMZEG00005005719	srek1	96	87.006	ENSMMOG00000008409	srek1	91	87.006	Mola_mola
ENSMZEG00005005719	srek1	96	76.503	ENSNGAG00000017527	-	92	77.596	Nannospalax_galili
ENSMZEG00005005719	srek1	100	97.312	ENSNBRG00000010718	srek1	100	97.312	Neolamprologus_brichardi
ENSMZEG00005005719	srek1	97	93.258	ENSONIG00000011080	srek1	50	93.258	Oreochromis_niloticus
ENSMZEG00005005719	srek1	97	86.339	ENSORLG00015020471	srek1	94	86.339	Oryzias_latipes_hsok
ENSMZEG00005005719	srek1	98	77.419	ENSPPAG00000031605	SREK1	92	78.142	Pan_paniscus
ENSMZEG00005005719	srek1	98	77.419	ENSPTRG00000016936	SREK1	92	78.142	Pan_troglodytes
ENSMZEG00005005719	srek1	98	77.419	ENSPANG00000008953	SREK1	92	78.142	Papio_anubis
ENSMZEG00005005719	srek1	98	82.778	ENSPMGG00000017031	srek1	100	82.778	Periophthalmus_magnuspinnatus
ENSMZEG00005005719	srek1	95	76.667	ENSPEMG00000024051	-	58	78.333	Peromyscus_maniculatus_bairdii
ENSMZEG00005005719	srek1	96	77.901	ENSPCIG00000017750	-	92	77.901	Phascolarctos_cinereus
ENSMZEG00005005719	srek1	96	89.266	ENSPLAG00000008827	srek1	99	89.266	Poecilia_latipinna
ENSMZEG00005005719	srek1	93	88.889	ENSPREG00000019912	srek1	98	88.889	Poecilia_reticulata
ENSMZEG00005005719	srek1	96	78.142	ENSPCOG00000026230	SREK1	92	78.142	Propithecus_coquereli
ENSMZEG00005005719	srek1	95	78.889	ENSRBIG00000033818	SREK1	93	76.757	Rhinopithecus_bieti
ENSMZEG00005005719	srek1	98	77.419	ENSRROG00000017210	SREK1	92	78.142	Rhinopithecus_roxellana
ENSMZEG00005005719	srek1	98	76.882	ENSSBOG00000031230	SREK1	92	78.142	Saimiri_boliviensis_boliviensis
ENSMZEG00005005719	srek1	96	76.243	ENSSPUG00000016553	SREK1	58	76.243	Sphenodon_punctatus
ENSMZEG00005005719	srek1	97	89.326	ENSSPAG00000022298	srek1	99	89.326	Stegastes_partitus
ENSMZEG00005005719	srek1	98	82.778	ENSTRUG00000002960	srek1	98	82.778	Takifugu_rubripes
ENSMZEG00005005719	srek1	96	78.142	ENSUAMG00000022661	-	92	78.142	Ursus_americanus
ENSMZEG00005005719	srek1	79	83.784	ENSVVUG00000005890	-	91	74.444	Vulpes_vulpes
ENSMZEG00005005719	srek1	99	88.462	ENSXCOG00000017793	srek1	99	88.462	Xiphophorus_couchianus