EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005749 (Gene tree)
Gene ID: 101475458
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 7911 bases
Position: chrLG16:18234027-18241937
Accession: 101475458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007532	RRM_1	PF00076.22	1.2e-10	1	1
ENSMZEP00005007521	RRM_1	PF00076.22	1.3e-10	1	1
ENSMZEP00005007532	RRM_3	PF08777.11	1.6e-24	1	1
ENSMZEP00005007521	RRM_3	PF08777.11	8.6e-24	1	1
ENSMZEP00005007532	La	PF05383.17	3.4e-20	1	1
ENSMZEP00005007521	La	PF05383.17	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007837	-	2431	XM_004557705	ENSMZEP00005007521	393 (aa)	XP_004557762	UPI000329A1D2
ENSMZET00005007848	-	1131	-	ENSMZEP00005007532	376 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005005749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005749's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005749	ssb	100	54.054	ENSG00000138385	SSB	98	65.254	Homo_sapiens
ENSMZEG00005005749	ssb	100	78.697	ENSAPOG00000003448	ssb	100	78.446	Acanthochromis_polyacanthus
ENSMZEG00005005749	ssb	100	52.029	ENSAMEG00000010507	SSB	99	52.267	Ailuropoda_melanoleuca
ENSMZEG00005005749	ssb	100	84.073	ENSACIG00000001738	ssb	98	85.984	Amphilophus_citrinellus
ENSMZEG00005005749	ssb	100	78.697	ENSAOCG00000020398	ssb	100	78.947	Amphiprion_ocellaris
ENSMZEG00005005749	ssb	100	78.697	ENSAPEG00000020395	ssb	100	78.947	Amphiprion_percula
ENSMZEG00005005749	ssb	100	79.000	ENSATEG00000016884	ssb	100	79.250	Anabas_testudineus
ENSMZEG00005005749	ssb	100	52.133	ENSAPLG00000006109	SSB	99	52.133	Anas_platyrhynchos
ENSMZEG00005005749	ssb	100	52.956	ENSACAG00000017008	SSB	99	52.709	Anolis_carolinensis
ENSMZEG00005005749	ssb	100	50.500	ENSANAG00000027195	-	99	50.248	Aotus_nancymaae
ENSMZEG00005005749	ssb	100	100.000	ENSACLG00000010798	ssb	100	100.000	Astatotilapia_calliptera
ENSMZEG00005005749	ssb	100	57.317	ENSAMXG00000012606	ssb	100	57.805	Astyanax_mexicanus
ENSMZEG00005005749	ssb	100	54.591	ENSBTAG00000008716	SSB	99	54.839	Bos_taurus
ENSMZEG00005005749	ssb	100	55.198	ENSCJAG00000045073	SSB	99	55.446	Callithrix_jacchus
ENSMZEG00005005749	ssb	100	54.321	ENSCAFG00000012418	SSB	99	54.568	Canis_familiaris
ENSMZEG00005005749	ssb	100	54.321	ENSCAFG00020002900	SSB	99	54.568	Canis_lupus_dingo
ENSMZEG00005005749	ssb	100	54.455	ENSCHIG00000022624	-	99	54.703	Capra_hircus
ENSMZEG00005005749	ssb	100	50.743	ENSCHIG00000022196	-	99	51.378	Capra_hircus
ENSMZEG00005005749	ssb	99	54.094	ENSTSYG00000000097	SSB	99	54.342	Carlito_syrichta
ENSMZEG00005005749	ssb	100	54.703	ENSCPOG00000003338	SSB	99	54.950	Cavia_porcellus
ENSMZEG00005005749	ssb	100	54.950	ENSCCAG00000035147	SSB	99	55.198	Cebus_capucinus
ENSMZEG00005005749	ssb	99	42.569	ENSCATG00000042909	-	97	42.569	Cercocebus_atys
ENSMZEG00005005749	ssb	71	50.173	ENSCATG00000036701	SSB	83	50.519	Cercocebus_atys
ENSMZEG00005005749	ssb	100	54.455	ENSCLAG00000015617	-	99	54.703	Chinchilla_lanigera
ENSMZEG00005005749	ssb	99	48.128	ENSCSAG00000018390	-	97	50.515	Chlorocebus_sabaeus
ENSMZEG00005005749	ssb	100	54.703	ENSCSAG00000015200	SSB	88	54.950	Chlorocebus_sabaeus
ENSMZEG00005005749	ssb	100	55.693	ENSCHOG00000007763	SSB	99	55.941	Choloepus_hoffmanni
ENSMZEG00005005749	ssb	100	56.127	ENSCPBG00000006519	SSB	99	56.373	Chrysemys_picta_bellii
ENSMZEG00005005749	ssb	98	43.890	ENSCANG00000028838	-	95	43.392	Colobus_angolensis_palliatus
ENSMZEG00005005749	ssb	100	54.703	ENSCANG00000027695	SSB	99	54.950	Colobus_angolensis_palliatus
ENSMZEG00005005749	ssb	100	48.883	ENSCANG00000033240	-	99	48.387	Colobus_angolensis_palliatus
ENSMZEG00005005749	ssb	100	51.351	ENSCGRG00001024831	Ssb	99	51.351	Cricetulus_griseus_chok1gshd
ENSMZEG00005005749	ssb	100	51.351	ENSCGRG00000005387	Ssb	99	51.351	Cricetulus_griseus_crigri
ENSMZEG00005005749	ssb	99	76.190	ENSCSEG00000011599	ssb	99	76.942	Cynoglossus_semilaevis
ENSMZEG00005005749	ssb	100	74.564	ENSCVAG00000021558	ssb	100	76.559	Cyprinodon_variegatus
ENSMZEG00005005749	ssb	100	58.663	ENSDARG00000029252	ssb	100	57.921	Danio_rerio
ENSMZEG00005005749	ssb	100	54.703	ENSDNOG00000013450	SSB	99	54.950	Dasypus_novemcinctus
ENSMZEG00005005749	ssb	100	51.597	ENSDORG00000005543	Ssb	99	51.597	Dipodomys_ordii
ENSMZEG00005005749	ssb	90	34.659	FBgn0011638	La	81	35.562	Drosophila_melanogaster
ENSMZEG00005005749	ssb	51	61.881	ENSETEG00000004614	-	52	61.881	Echinops_telfairi
ENSMZEG00005005749	ssb	99	43.767	ENSEBUG00000001237	ssb	95	44.205	Eptatretus_burgeri
ENSMZEG00005005749	ssb	100	55.446	ENSEASG00005022835	SSB	99	55.693	Equus_asinus_asinus
ENSMZEG00005005749	ssb	100	55.446	ENSECAG00000018495	SSB	99	55.693	Equus_caballus
ENSMZEG00005005749	ssb	80	48.525	ENSEEUG00000008077	SSB	78	48.525	Erinaceus_europaeus
ENSMZEG00005005749	ssb	100	65.423	ENSELUG00000020929	ssb	100	65.672	Esox_lucius
ENSMZEG00005005749	ssb	100	55.062	ENSFCAG00000011601	SSB	99	55.309	Felis_catus
ENSMZEG00005005749	ssb	99	54.591	ENSFALG00000000930	SSB	99	54.591	Ficedula_albicollis
ENSMZEG00005005749	ssb	100	54.950	ENSFDAG00000000598	SSB	99	55.198	Fukomys_damarensis
ENSMZEG00005005749	ssb	74	71.761	ENSFHEG00000003268	ssb	98	67.192	Fundulus_heteroclitus
ENSMZEG00005005749	ssb	98	69.750	ENSGMOG00000002664	ssb	100	69.750	Gadus_morhua
ENSMZEG00005005749	ssb	99	54.839	ENSGALG00000009677	SSB	99	54.229	Gallus_gallus
ENSMZEG00005005749	ssb	100	75.000	ENSGAFG00000002749	ssb	100	75.000	Gambusia_affinis
ENSMZEG00005005749	ssb	100	75.062	ENSGACG00000005107	ssb	100	75.062	Gasterosteus_aculeatus
ENSMZEG00005005749	ssb	100	55.637	ENSGAGG00000007807	SSB	99	55.882	Gopherus_agassizii
ENSMZEG00005005749	ssb	100	47.044	ENSGGOG00000024891	-	99	46.782	Gorilla_gorilla
ENSMZEG00005005749	ssb	53	48.858	ENSGGOG00000023471	-	89	49.315	Gorilla_gorilla
ENSMZEG00005005749	ssb	100	98.982	ENSHBUG00000006584	ssb	100	98.982	Haplochromis_burtoni
ENSMZEG00005005749	ssb	100	48.139	ENSHGLG00000005832	-	99	48.387	Heterocephalus_glaber_female
ENSMZEG00005005749	ssb	98	51.015	ENSHGLG00000004478	-	97	51.015	Heterocephalus_glaber_female
ENSMZEG00005005749	ssb	100	53.771	ENSHGLG00000017580	-	99	54.015	Heterocephalus_glaber_female
ENSMZEG00005005749	ssb	100	49.628	ENSHGLG00100008767	-	99	49.502	Heterocephalus_glaber_male
ENSMZEG00005005749	ssb	100	53.771	ENSHGLG00100003084	-	99	54.015	Heterocephalus_glaber_male
ENSMZEG00005005749	ssb	99	74.121	ENSHCOG00000019011	ssb	99	75.127	Hippocampus_comes
ENSMZEG00005005749	ssb	100	60.488	ENSIPUG00000003681	SSB	100	59.756	Ictalurus_punctatus
ENSMZEG00005005749	ssb	100	54.703	ENSSTOG00000008416	SSB	99	54.591	Ictidomys_tridecemlineatus
ENSMZEG00005005749	ssb	91	43.923	ENSJJAG00000016250	-	94	44.382	Jaculus_jaculus
ENSMZEG00005005749	ssb	100	49.524	ENSJJAG00000023158	-	99	49.524	Jaculus_jaculus
ENSMZEG00005005749	ssb	100	76.190	ENSKMAG00000017317	ssb	100	76.190	Kryptolebias_marmoratus
ENSMZEG00005005749	ssb	100	77.193	ENSLBEG00000017345	ssb	100	77.193	Labrus_bergylta
ENSMZEG00005005749	ssb	99	53.865	ENSLACG00000014056	SSB	98	53.367	Latimeria_chalumnae
ENSMZEG00005005749	ssb	100	63.054	ENSLOCG00000007933	ssb	99	63.054	Lepisosteus_oculatus
ENSMZEG00005005749	ssb	100	48.622	ENSLAFG00000028909	-	99	48.120	Loxodonta_africana
ENSMZEG00005005749	ssb	78	42.373	ENSLAFG00000026721	-	98	43.960	Loxodonta_africana
ENSMZEG00005005749	ssb	100	52.732	ENSLAFG00000000867	-	99	52.969	Loxodonta_africana
ENSMZEG00005005749	ssb	100	54.703	ENSMFAG00000039066	SSB	99	54.950	Macaca_fascicularis
ENSMZEG00005005749	ssb	93	46.176	ENSMFAG00000041478	-	91	49.697	Macaca_fascicularis
ENSMZEG00005005749	ssb	99	40.554	ENSMMUG00000039889	-	98	40.806	Macaca_mulatta
ENSMZEG00005005749	ssb	100	48.250	ENSMMUG00000011724	-	97	48.250	Macaca_mulatta
ENSMZEG00005005749	ssb	100	54.703	ENSMMUG00000023051	SSB	99	54.950	Macaca_mulatta
ENSMZEG00005005749	ssb	93	46.176	ENSMNEG00000034698	-	91	49.697	Macaca_nemestrina
ENSMZEG00005005749	ssb	100	47.059	ENSMNEG00000028321	SSB	85	66.087	Macaca_nemestrina
ENSMZEG00005005749	ssb	100	38.596	ENSMLEG00000042644	-	99	38.596	Mandrillus_leucophaeus
ENSMZEG00005005749	ssb	100	54.703	ENSMLEG00000035717	SSB	88	66.087	Mandrillus_leucophaeus
ENSMZEG00005005749	ssb	100	78.947	ENSMAMG00000004800	ssb	100	79.449	Mastacembelus_armatus
ENSMZEG00005005749	ssb	99	54.591	ENSMGAG00000010328	SSB	100	61.353	Meleagris_gallopavo
ENSMZEG00005005749	ssb	100	55.198	ENSMICG00000028252	-	99	55.446	Microcebus_murinus
ENSMZEG00005005749	ssb	98	50.643	ENSMICG00000033304	-	97	51.436	Microcebus_murinus
ENSMZEG00005005749	ssb	100	42.079	ENSMODG00000007027	-	99	43.317	Monodelphis_domestica
ENSMZEG00005005749	ssb	100	52.311	ENSMODG00000008227	-	99	52.068	Monodelphis_domestica
ENSMZEG00005005749	ssb	100	45.161	ENSMODG00000019271	-	99	45.658	Monodelphis_domestica
ENSMZEG00005005749	ssb	100	75.328	ENSMALG00000008045	ssb	90	78.495	Monopterus_albus
ENSMZEG00005005749	ssb	100	49.161	MGP_CAROLIEiJ_G0023629	-	98	61.783	Mus_caroli
ENSMZEG00005005749	ssb	100	49.161	ENSMUSG00000068882	Ssb	98	61.783	Mus_musculus
ENSMZEG00005005749	ssb	100	49.279	MGP_PahariEiJ_G0025081	-	98	61.146	Mus_pahari
ENSMZEG00005005749	ssb	100	49.161	MGP_SPRETEiJ_G0024551	Ssb	98	61.783	Mus_spretus
ENSMZEG00005005749	ssb	100	55.198	ENSMPUG00000000785	SSB	99	55.446	Mustela_putorius_furo
ENSMZEG00005005749	ssb	100	53.253	ENSMLUG00000016316	SSB	99	52.771	Myotis_lucifugus
ENSMZEG00005005749	ssb	100	98.939	ENSNBRG00000012661	ssb	100	98.939	Neolamprologus_brichardi
ENSMZEG00005005749	ssb	100	54.455	ENSNLEG00000004958	SSB	99	54.703	Nomascus_leucogenys
ENSMZEG00005005749	ssb	87	43.505	ENSNLEG00000028754	-	79	43.505	Nomascus_leucogenys
ENSMZEG00005005749	ssb	65	59.438	ENSMEUG00000001650	-	100	61.200	Notamacropus_eugenii
ENSMZEG00005005749	ssb	52	55.414	ENSOPRG00000008475	-	54	55.414	Ochotona_princeps
ENSMZEG00005005749	ssb	93	53.659	ENSODEG00000004202	-	99	53.388	Octodon_degus
ENSMZEG00005005749	ssb	100	94.162	ENSONIG00000008776	ssb	100	94.162	Oreochromis_niloticus
ENSMZEG00005005749	ssb	97	55.357	ENSOANG00000008543	SSB	96	56.378	Ornithorhynchus_anatinus
ENSMZEG00005005749	ssb	100	54.950	ENSOCUG00000010396	SSB	99	55.198	Oryctolagus_cuniculus
ENSMZEG00005005749	ssb	100	75.561	ENSORLG00000017208	ssb	100	76.309	Oryzias_latipes
ENSMZEG00005005749	ssb	100	75.373	ENSORLG00020022574	ssb	100	76.119	Oryzias_latipes_hni
ENSMZEG00005005749	ssb	100	76.309	ENSORLG00015016592	ssb	100	76.808	Oryzias_latipes_hsok
ENSMZEG00005005749	ssb	100	76.309	ENSOMEG00000003193	ssb	100	75.062	Oryzias_melastigma
ENSMZEG00005005749	ssb	100	52.257	ENSOGAG00000029768	SSB	99	51.781	Otolemur_garnettii
ENSMZEG00005005749	ssb	100	54.455	ENSOARG00000002906	SSB	99	54.703	Ovis_aries
ENSMZEG00005005749	ssb	97	44.072	ENSPPAG00000006189	-	96	44.072	Pan_paniscus
ENSMZEG00005005749	ssb	100	54.054	ENSPPAG00000042673	SSB	99	54.300	Pan_paniscus
ENSMZEG00005005749	ssb	100	47.291	ENSPPAG00000032427	-	100	57.364	Pan_paniscus
ENSMZEG00005005749	ssb	100	55.062	ENSPPRG00000006599	SSB	99	55.309	Panthera_pardus
ENSMZEG00005005749	ssb	100	55.062	ENSPTIG00000011021	SSB	97	55.309	Panthera_tigris_altaica
ENSMZEG00005005749	ssb	100	54.054	ENSPTRG00000012620	SSB	99	54.300	Pan_troglodytes
ENSMZEG00005005749	ssb	100	45.567	ENSPTRG00000042880	-	99	45.545	Pan_troglodytes
ENSMZEG00005005749	ssb	99	38.503	ENSPANG00000031877	-	92	38.281	Papio_anubis
ENSMZEG00005005749	ssb	100	54.703	ENSPANG00000007440	SSB	99	54.950	Papio_anubis
ENSMZEG00005005749	ssb	99	41.624	ENSPANG00000034126	-	97	41.476	Papio_anubis
ENSMZEG00005005749	ssb	100	66.667	ENSPKIG00000019325	ssb	99	66.915	Paramormyrops_kingsleyae
ENSMZEG00005005749	ssb	100	56.127	ENSPSIG00000002265	SSB	93	56.863	Pelodiscus_sinensis
ENSMZEG00005005749	ssb	89	68.639	ENSPMGG00000020075	ssb	92	68.272	Periophthalmus_magnuspinnatus
ENSMZEG00005005749	ssb	85	45.231	ENSPMAG00000002982	ssb	89	44.125	Petromyzon_marinus
ENSMZEG00005005749	ssb	100	53.827	ENSPCIG00000028591	-	99	53.827	Phascolarctos_cinereus
ENSMZEG00005005749	ssb	100	75.312	ENSPFOG00000009650	ssb	100	75.312	Poecilia_formosa
ENSMZEG00005005749	ssb	100	75.124	ENSPLAG00000020498	ssb	100	75.373	Poecilia_latipinna
ENSMZEG00005005749	ssb	100	75.312	ENSPMEG00000001051	ssb	100	75.312	Poecilia_mexicana
ENSMZEG00005005749	ssb	99	73.228	ENSPREG00000003708	ssb	97	76.694	Poecilia_reticulata
ENSMZEG00005005749	ssb	100	54.455	ENSPPYG00000012919	SSB	99	54.703	Pongo_abelii
ENSMZEG00005005749	ssb	95	52.880	ENSPCAG00000010276	SSB	99	53.141	Procavia_capensis
ENSMZEG00005005749	ssb	100	52.228	ENSPCOG00000015741	-	92	63.793	Propithecus_coquereli
ENSMZEG00005005749	ssb	100	49.010	ENSPCOG00000023189	-	99	49.257	Propithecus_coquereli
ENSMZEG00005005749	ssb	93	53.090	ENSPVAG00000006615	SSB	99	55.556	Pteropus_vampyrus
ENSMZEG00005005749	ssb	100	99.491	ENSPNYG00000006444	ssb	100	99.491	Pundamilia_nyererei
ENSMZEG00005005749	ssb	86	61.656	ENSPNAG00000011708	ssb	100	57.598	Pygocentrus_nattereri
ENSMZEG00005005749	ssb	100	49.640	ENSRNOG00000007998	Ssb	99	49.880	Rattus_norvegicus
ENSMZEG00005005749	ssb	100	50.743	ENSRNOG00000011606	AABR07061825.1	99	50.000	Rattus_norvegicus
ENSMZEG00005005749	ssb	100	47.304	ENSRBIG00000041972	SSB	88	66.087	Rhinopithecus_bieti
ENSMZEG00005005749	ssb	94	46.684	ENSRBIG00000041232	-	98	46.684	Rhinopithecus_bieti
ENSMZEG00005005749	ssb	86	51.453	ENSRBIG00000041608	-	94	51.453	Rhinopithecus_bieti
ENSMZEG00005005749	ssb	99	40.452	ENSRBIG00000029918	-	97	40.452	Rhinopithecus_bieti
ENSMZEG00005005749	ssb	86	52.874	ENSRROG00000034102	-	85	53.161	Rhinopithecus_roxellana
ENSMZEG00005005749	ssb	99	45.729	ENSRROG00000007149	-	97	45.729	Rhinopithecus_roxellana
ENSMZEG00005005749	ssb	98	47.462	ENSRROG00000031684	-	88	58.784	Rhinopithecus_roxellana
ENSMZEG00005005749	ssb	100	54.703	ENSRROG00000040346	SSB	99	54.950	Rhinopithecus_roxellana
ENSMZEG00005005749	ssb	100	54.703	ENSSBOG00000027204	SSB	99	54.950	Saimiri_boliviensis_boliviensis
ENSMZEG00005005749	ssb	100	54.321	ENSSHAG00000018062	SSB	99	54.568	Sarcophilus_harrisii
ENSMZEG00005005749	ssb	100	64.691	ENSSFOG00015000550	ssb	99	63.704	Scleropages_formosus
ENSMZEG00005005749	ssb	100	77.099	ENSSMAG00000013885	ssb	99	79.189	Scophthalmus_maximus
ENSMZEG00005005749	ssb	100	80.702	ENSSDUG00000020117	ssb	100	80.952	Seriola_dumerili
ENSMZEG00005005749	ssb	100	77.078	ENSSLDG00000002525	ssb	100	77.330	Seriola_lalandi_dorsalis
ENSMZEG00005005749	ssb	95	49.738	ENSSARG00000007747	SSB	99	49.606	Sorex_araneus
ENSMZEG00005005749	ssb	100	55.911	ENSSPUG00000012112	SSB	99	56.049	Sphenodon_punctatus
ENSMZEG00005005749	ssb	100	77.193	ENSSPAG00000005696	ssb	100	77.444	Stegastes_partitus
ENSMZEG00005005749	ssb	98	52.020	ENSSSCG00000015938	SSB	96	53.077	Sus_scrofa
ENSMZEG00005005749	ssb	99	53.333	ENSTGUG00000007942	SSB	99	53.827	Taeniopygia_guttata
ENSMZEG00005005749	ssb	100	74.559	ENSTRUG00000017839	ssb	100	74.559	Takifugu_rubripes
ENSMZEG00005005749	ssb	97	71.351	ENSTNIG00000000915	ssb	100	73.684	Tetraodon_nigroviridis
ENSMZEG00005005749	ssb	82	66.087	ENSTBEG00000009056	SSB	81	66.087	Tupaia_belangeri
ENSMZEG00005005749	ssb	100	55.802	ENSTTRG00000002152	SSB	99	56.049	Tursiops_truncatus
ENSMZEG00005005749	ssb	99	52.699	ENSUAMG00000027833	SSB	98	55.615	Ursus_americanus
ENSMZEG00005005749	ssb	100	54.074	ENSUMAG00000013907	SSB	99	54.321	Ursus_maritimus
ENSMZEG00005005749	ssb	100	54.591	ENSVPAG00000007183	SSB	99	54.839	Vicugna_pacos
ENSMZEG00005005749	ssb	100	54.321	ENSVVUG00000016573	SSB	77	54.568	Vulpes_vulpes
ENSMZEG00005005749	ssb	99	50.469	ENSXETG00000025402	ssb	99	50.469	Xenopus_tropicalis
ENSMZEG00005005749	ssb	99	69.974	ENSXCOG00000019109	ssb	99	69.974	Xiphophorus_couchianus
ENSMZEG00005005749	ssb	100	72.772	ENSXMAG00000004888	ssb	100	72.772	Xiphophorus_maculatus