EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005005751 (Gene tree)
Gene ID: 101484803
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 21668 bases
Position: chrLG13:19420200-19441867
Accession: 101484803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005007513	SpoU_methylase	PF00588.19	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005007829	-	5377	XM_004555997	ENSMZEP00005007513	1619 (aa)	XP_004556054	UPI00032973DE

Gene Model

Click here to download ENSMZEG00005005751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005005751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005005751	si:dkey-85a20.4	85	46.230	ENSG00000059588	TARBP1	86	46.371	Homo_sapiens
ENSMZEG00005005751	si:dkey-85a20.4	99	82.064	ENSAPOG00000016419	si:dkey-85a20.4	99	82.064	Acanthochromis_polyacanthus
ENSMZEG00005005751	si:dkey-85a20.4	84	46.026	ENSAMEG00000003359	TARBP1	99	46.026	Ailuropoda_melanoleuca
ENSMZEG00005005751	si:dkey-85a20.4	100	77.027	ENSATEG00000020266	si:dkey-85a20.4	100	77.027	Anabas_testudineus
ENSMZEG00005005751	si:dkey-85a20.4	83	47.602	ENSAPLG00000007666	TARBP1	99	47.839	Anas_platyrhynchos
ENSMZEG00005005751	si:dkey-85a20.4	83	43.554	ENSACAG00000001142	TARBP1	86	42.857	Anolis_carolinensis
ENSMZEG00005005751	si:dkey-85a20.4	86	45.193	ENSANAG00000022031	TARBP1	89	45.193	Aotus_nancymaae
ENSMZEG00005005751	si:dkey-85a20.4	78	55.773	ENSBTAG00000004517	TARBP1	92	55.773	Bos_taurus
ENSMZEG00005005751	si:dkey-85a20.4	86	46.111	ENSCJAG00000018155	TARBP1	86	46.181	Callithrix_jacchus
ENSMZEG00005005751	si:dkey-85a20.4	85	46.186	ENSCAFG00000011533	TARBP1	98	46.186	Canis_familiaris
ENSMZEG00005005751	si:dkey-85a20.4	85	46.105	ENSCAFG00020027141	TARBP1	86	46.175	Canis_lupus_dingo
ENSMZEG00005005751	si:dkey-85a20.4	85	45.364	ENSCHIG00000011437	TARBP1	94	43.049	Capra_hircus
ENSMZEG00005005751	si:dkey-85a20.4	82	45.742	ENSTSYG00000010382	TARBP1	99	45.742	Carlito_syrichta
ENSMZEG00005005751	si:dkey-85a20.4	78	42.634	ENSCAPG00000010831	TARBP1	99	42.813	Cavia_aperea
ENSMZEG00005005751	si:dkey-85a20.4	85	45.010	ENSCPOG00000013995	TARBP1	94	42.476	Cavia_porcellus
ENSMZEG00005005751	si:dkey-85a20.4	85	46.246	ENSCCAG00000037278	TARBP1	86	46.300	Cebus_capucinus
ENSMZEG00005005751	si:dkey-85a20.4	86	46.414	ENSCATG00000011754	TARBP1	86	46.414	Cercocebus_atys
ENSMZEG00005005751	si:dkey-85a20.4	80	45.259	ENSCLAG00000003655	TARBP1	96	45.333	Chinchilla_lanigera
ENSMZEG00005005751	si:dkey-85a20.4	79	47.054	ENSCSAG00000010100	TARBP1	99	47.054	Chlorocebus_sabaeus
ENSMZEG00005005751	si:dkey-85a20.4	78	45.553	ENSCPBG00000005587	TARBP1	81	51.156	Chrysemys_picta_bellii
ENSMZEG00005005751	si:dkey-85a20.4	83	47.016	ENSCANG00000034343	TARBP1	99	47.016	Colobus_angolensis_palliatus
ENSMZEG00005005751	si:dkey-85a20.4	85	45.531	ENSCGRG00001016690	Tarbp1	88	45.531	Cricetulus_griseus_chok1gshd
ENSMZEG00005005751	si:dkey-85a20.4	85	45.429	ENSCGRG00000016893	Tarbp1	94	45.429	Cricetulus_griseus_crigri
ENSMZEG00005005751	si:dkey-85a20.4	99	67.264	ENSCSEG00000005255	si:dkey-85a20.4	99	70.833	Cynoglossus_semilaevis
ENSMZEG00005005751	si:dkey-85a20.4	99	56.385	ENSDARG00000079055	si:dkey-85a20.4	99	71.966	Danio_rerio
ENSMZEG00005005751	si:dkey-85a20.4	85	46.434	ENSDNOG00000008637	TARBP1	94	44.123	Dasypus_novemcinctus
ENSMZEG00005005751	si:dkey-85a20.4	80	45.768	ENSDORG00000007984	Tarbp1	100	45.768	Dipodomys_ordii
ENSMZEG00005005751	si:dkey-85a20.4	85	46.554	ENSEASG00005000252	TARBP1	91	45.080	Equus_asinus_asinus
ENSMZEG00005005751	si:dkey-85a20.4	85	46.605	ENSECAG00000023673	TARBP1	86	46.676	Equus_caballus
ENSMZEG00005005751	si:dkey-85a20.4	99	61.217	ENSELUG00000012193	si:dkey-85a20.4	99	61.217	Esox_lucius
ENSMZEG00005005751	si:dkey-85a20.4	85	44.288	ENSFCAG00000014183	TARBP1	85	44.211	Felis_catus
ENSMZEG00005005751	si:dkey-85a20.4	80	47.626	ENSFALG00000013565	TARBP1	99	47.590	Ficedula_albicollis
ENSMZEG00005005751	si:dkey-85a20.4	79	44.144	ENSFDAG00000001308	TARBP1	99	44.294	Fukomys_damarensis
ENSMZEG00005005751	si:dkey-85a20.4	100	62.776	ENSFHEG00000007565	si:dkey-85a20.4	97	76.943	Fundulus_heteroclitus
ENSMZEG00005005751	si:dkey-85a20.4	86	64.372	ENSGMOG00000004549	si:dkey-85a20.4	99	63.997	Gadus_morhua
ENSMZEG00005005751	si:dkey-85a20.4	84	45.323	ENSGALG00000011000	TARBP1	97	46.784	Gallus_gallus
ENSMZEG00005005751	si:dkey-85a20.4	99	73.432	ENSGAFG00000007387	si:dkey-85a20.4	99	73.432	Gambusia_affinis
ENSMZEG00005005751	si:dkey-85a20.4	86	76.549	ENSGACG00000005865	si:dkey-85a20.4	99	76.761	Gasterosteus_aculeatus
ENSMZEG00005005751	si:dkey-85a20.4	83	47.605	ENSGAGG00000012102	TARBP1	89	47.155	Gopherus_agassizii
ENSMZEG00005005751	si:dkey-85a20.4	84	45.376	ENSGGOG00000022879	TARBP1	99	45.376	Gorilla_gorilla
ENSMZEG00005005751	si:dkey-85a20.4	100	99.506	ENSHBUG00000008877	si:dkey-85a20.4	100	99.506	Haplochromis_burtoni
ENSMZEG00005005751	si:dkey-85a20.4	85	45.493	ENSHGLG00000011592	TARBP1	87	45.563	Heterocephalus_glaber_female
ENSMZEG00005005751	si:dkey-85a20.4	85	45.742	ENSHGLG00100015169	TARBP1	95	45.742	Heterocephalus_glaber_male
ENSMZEG00005005751	si:dkey-85a20.4	96	58.090	ENSIPUG00000005249	si:dkey-85a20.4	98	53.300	Ictalurus_punctatus
ENSMZEG00005005751	si:dkey-85a20.4	82	46.452	ENSSTOG00000032291	TARBP1	96	46.525	Ictidomys_tridecemlineatus
ENSMZEG00005005751	si:dkey-85a20.4	83	43.300	ENSJJAG00000017840	Tarbp1	94	43.300	Jaculus_jaculus
ENSMZEG00005005751	si:dkey-85a20.4	89	70.538	ENSKMAG00000017546	si:dkey-85a20.4	97	70.538	Kryptolebias_marmoratus
ENSMZEG00005005751	si:dkey-85a20.4	84	77.689	ENSLBEG00000012132	si:dkey-85a20.4	97	77.689	Labrus_bergylta
ENSMZEG00005005751	si:dkey-85a20.4	99	43.447	ENSLACG00000004337	TARBP1	99	43.627	Latimeria_chalumnae
ENSMZEG00005005751	si:dkey-85a20.4	99	54.468	ENSLOCG00000016214	si:dkey-85a20.4	100	54.406	Lepisosteus_oculatus
ENSMZEG00005005751	si:dkey-85a20.4	85	46.138	ENSLAFG00000011394	TARBP1	88	46.208	Loxodonta_africana
ENSMZEG00005005751	si:dkey-85a20.4	86	44.944	ENSMFAG00000041068	TARBP1	94	43.191	Macaca_fascicularis
ENSMZEG00005005751	si:dkey-85a20.4	86	45.102	ENSMMUG00000021703	TARBP1	86	44.944	Macaca_mulatta
ENSMZEG00005005751	si:dkey-85a20.4	86	46.273	ENSMNEG00000045002	TARBP1	86	46.273	Macaca_nemestrina
ENSMZEG00005005751	si:dkey-85a20.4	83	46.488	ENSMLEG00000044182	TARBP1	99	46.488	Mandrillus_leucophaeus
ENSMZEG00005005751	si:dkey-85a20.4	100	74.324	ENSMAMG00000021760	si:dkey-85a20.4	100	74.324	Mastacembelus_armatus
ENSMZEG00005005751	si:dkey-85a20.4	85	45.807	ENSMAUG00000020968	Tarbp1	88	45.807	Mesocricetus_auratus
ENSMZEG00005005751	si:dkey-85a20.4	86	42.243	ENSMICG00000015280	TARBP1	99	39.432	Microcebus_murinus
ENSMZEG00005005751	si:dkey-85a20.4	85	44.866	ENSMOCG00000004128	Tarbp1	88	44.866	Microtus_ochrogaster
ENSMZEG00005005751	si:dkey-85a20.4	99	72.790	ENSMMOG00000007795	si:dkey-85a20.4	99	72.852	Mola_mola
ENSMZEG00005005751	si:dkey-85a20.4	83	46.304	ENSMODG00000008504	TARBP1	93	43.283	Monodelphis_domestica
ENSMZEG00005005751	si:dkey-85a20.4	99	75.359	ENSMALG00000002916	si:dkey-85a20.4	99	75.453	Monopterus_albus
ENSMZEG00005005751	si:dkey-85a20.4	85	45.571	MGP_CAROLIEiJ_G0031729	Tarbp1	78	60.920	Mus_caroli
ENSMZEG00005005751	si:dkey-85a20.4	85	45.512	ENSMUSG00000090290	Tarbp1	87	45.512	Mus_musculus
ENSMZEG00005005751	si:dkey-85a20.4	85	45.551	MGP_PahariEiJ_G0023326	Tarbp1	87	45.551	Mus_pahari
ENSMZEG00005005751	si:dkey-85a20.4	85	45.448	MGP_SPRETEiJ_G0032846	Tarbp1	87	45.448	Mus_spretus
ENSMZEG00005005751	si:dkey-85a20.4	77	47.031	ENSMPUG00000002802	TARBP1	99	47.031	Mustela_putorius_furo
ENSMZEG00005005751	si:dkey-85a20.4	83	44.949	ENSMLUG00000002414	TARBP1	99	44.877	Myotis_lucifugus
ENSMZEG00005005751	si:dkey-85a20.4	85	46.295	ENSNLEG00000002518	TARBP1	86	46.224	Nomascus_leucogenys
ENSMZEG00005005751	si:dkey-85a20.4	51	57.021	ENSMEUG00000011370	-	56	57.021	Notamacropus_eugenii
ENSMZEG00005005751	si:dkey-85a20.4	68	53.910	ENSOPRG00000013822	TARBP1	68	53.910	Ochotona_princeps
ENSMZEG00005005751	si:dkey-85a20.4	85	44.672	ENSODEG00000005238	TARBP1	90	44.813	Octodon_degus
ENSMZEG00005005751	si:dkey-85a20.4	86	96.071	ENSONIG00000009789	si:dkey-85a20.4	100	96.071	Oreochromis_niloticus
ENSMZEG00005005751	si:dkey-85a20.4	85	45.346	ENSOCUG00000017418	TARBP1	85	45.230	Oryctolagus_cuniculus
ENSMZEG00005005751	si:dkey-85a20.4	99	70.049	ENSORLG00000010529	si:dkey-85a20.4	99	70.049	Oryzias_latipes
ENSMZEG00005005751	si:dkey-85a20.4	99	70.049	ENSORLG00020019264	si:dkey-85a20.4	99	70.049	Oryzias_latipes_hni
ENSMZEG00005005751	si:dkey-85a20.4	99	69.742	ENSORLG00015003276	si:dkey-85a20.4	99	69.742	Oryzias_latipes_hsok
ENSMZEG00005005751	si:dkey-85a20.4	85	44.413	ENSOGAG00000002379	TARBP1	91	42.848	Otolemur_garnettii
ENSMZEG00005005751	si:dkey-85a20.4	85	45.442	ENSOARG00000003434	TARBP1	92	45.442	Ovis_aries
ENSMZEG00005005751	si:dkey-85a20.4	83	46.638	ENSPPAG00000028097	TARBP1	99	46.638	Pan_paniscus
ENSMZEG00005005751	si:dkey-85a20.4	83	45.119	ENSPPRG00000013561	TARBP1	86	48.214	Panthera_pardus
ENSMZEG00005005751	si:dkey-85a20.4	82	45.766	ENSPTIG00000009281	TARBP1	99	45.766	Panthera_tigris_altaica
ENSMZEG00005005751	si:dkey-85a20.4	85	46.295	ENSPTRG00000002124	TARBP1	86	46.295	Pan_troglodytes
ENSMZEG00005005751	si:dkey-85a20.4	86	46.343	ENSPANG00000021933	TARBP1	86	46.343	Papio_anubis
ENSMZEG00005005751	si:dkey-85a20.4	99	57.403	ENSPKIG00000016716	si:dkey-85a20.4	99	57.403	Paramormyrops_kingsleyae
ENSMZEG00005005751	si:dkey-85a20.4	79	47.050	ENSPSIG00000010699	TARBP1	99	46.897	Pelodiscus_sinensis
ENSMZEG00005005751	si:dkey-85a20.4	85	45.571	ENSPEMG00000006888	Tarbp1	92	45.571	Peromyscus_maniculatus_bairdii
ENSMZEG00005005751	si:dkey-85a20.4	76	69.898	ENSPCIG00000029710	TARBP1	83	69.898	Phascolarctos_cinereus
ENSMZEG00005005751	si:dkey-85a20.4	86	74.964	ENSPFOG00000013020	si:dkey-85a20.4	99	74.964	Poecilia_formosa
ENSMZEG00005005751	si:dkey-85a20.4	99	73.510	ENSPLAG00000006044	si:dkey-85a20.4	99	73.510	Poecilia_latipinna
ENSMZEG00005005751	si:dkey-85a20.4	99	73.694	ENSPMEG00000017857	si:dkey-85a20.4	99	73.694	Poecilia_mexicana
ENSMZEG00005005751	si:dkey-85a20.4	100	73.006	ENSPREG00000022753	si:dkey-85a20.4	100	73.006	Poecilia_reticulata
ENSMZEG00005005751	si:dkey-85a20.4	77	45.812	ENSPPYG00000000102	TARBP1	84	45.812	Pongo_abelii
ENSMZEG00005005751	si:dkey-85a20.4	66	77.551	ENSPCAG00000004808	TARBP1	67	77.551	Procavia_capensis
ENSMZEG00005005751	si:dkey-85a20.4	86	44.437	ENSPCOG00000005666	TARBP1	99	41.226	Propithecus_coquereli
ENSMZEG00005005751	si:dkey-85a20.4	81	60.000	ENSPVAG00000014798	TARBP1	87	40.014	Pteropus_vampyrus
ENSMZEG00005005751	si:dkey-85a20.4	99	93.847	ENSPNYG00000019135	si:dkey-85a20.4	99	93.847	Pundamilia_nyererei
ENSMZEG00005005751	si:dkey-85a20.4	85	43.530	ENSRNOG00000053574	Tarbp1	87	43.530	Rattus_norvegicus
ENSMZEG00005005751	si:dkey-85a20.4	85	44.147	ENSRBIG00000043362	TARBP1	94	44.358	Rhinopithecus_bieti
ENSMZEG00005005751	si:dkey-85a20.4	85	46.939	ENSRROG00000029527	TARBP1	89	46.939	Rhinopithecus_roxellana
ENSMZEG00005005751	si:dkey-85a20.4	83	46.676	ENSSBOG00000034503	TARBP1	96	46.676	Saimiri_boliviensis_boliviensis
ENSMZEG00005005751	si:dkey-85a20.4	83	46.366	ENSSHAG00000000013	TARBP1	99	46.366	Sarcophilus_harrisii
ENSMZEG00005005751	si:dkey-85a20.4	99	53.998	ENSSFOG00015002660	si:dkey-85a20.4	97	61.480	Scleropages_formosus
ENSMZEG00005005751	si:dkey-85a20.4	100	75.862	ENSSMAG00000007081	si:dkey-85a20.4	100	76.165	Scophthalmus_maximus
ENSMZEG00005005751	si:dkey-85a20.4	100	76.663	ENSSDUG00000023566	si:dkey-85a20.4	100	76.663	Seriola_dumerili
ENSMZEG00005005751	si:dkey-85a20.4	99	80.605	ENSSLDG00000020200	si:dkey-85a20.4	100	80.605	Seriola_lalandi_dorsalis
ENSMZEG00005005751	si:dkey-85a20.4	75	58.565	ENSSARG00000012207	TARBP1	76	58.565	Sorex_araneus
ENSMZEG00005005751	si:dkey-85a20.4	86	45.455	ENSSPUG00000015364	TARBP1	97	42.706	Sphenodon_punctatus
ENSMZEG00005005751	si:dkey-85a20.4	99	82.443	ENSSPAG00000007213	si:dkey-85a20.4	99	82.454	Stegastes_partitus
ENSMZEG00005005751	si:dkey-85a20.4	85	46.040	ENSSSCG00000010160	TARBP1	86	46.110	Sus_scrofa
ENSMZEG00005005751	si:dkey-85a20.4	80	47.214	ENSTGUG00000010214	TARBP1	99	47.440	Taeniopygia_guttata
ENSMZEG00005005751	si:dkey-85a20.4	94	67.038	ENSTNIG00000016586	si:dkey-85a20.4	100	73.080	Tetraodon_nigroviridis
ENSMZEG00005005751	si:dkey-85a20.4	79	41.985	ENSTTRG00000008707	TARBP1	85	41.785	Tursiops_truncatus
ENSMZEG00005005751	si:dkey-85a20.4	81	45.044	ENSUMAG00000006730	TARBP1	98	45.044	Ursus_maritimus
ENSMZEG00005005751	si:dkey-85a20.4	63	75.269	ENSVPAG00000007665	TARBP1	73	75.269	Vicugna_pacos
ENSMZEG00005005751	si:dkey-85a20.4	83	46.604	ENSVVUG00000007460	TARBP1	98	48.148	Vulpes_vulpes
ENSMZEG00005005751	si:dkey-85a20.4	83	43.084	ENSXETG00000016224	tarbp1	99	43.084	Xenopus_tropicalis
ENSMZEG00005005751	si:dkey-85a20.4	83	77.702	ENSXCOG00000011779	si:dkey-85a20.4	99	77.702	Xiphophorus_couchianus
ENSMZEG00005005751	si:dkey-85a20.4	64	74.381	ENSXMAG00000009600	si:dkey-85a20.4	100	74.381	Xiphophorus_maculatus