EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006256 (Gene tree)
Gene ID: 101472848
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11364 bases
Position: chrLG8:4326399-4337762
Accession: 101472848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005008216	RRM_1	PF00076.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005008543	-	3833	XM_004557506	ENSMZEP00005008216	276 (aa)	XP_004557563	UPI000329C417

Gene Model

Click here to download ENSMZEG00005006256's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006256	-	85	72.199	ENSG00000205937	RNPS1	66	84.706	Homo_sapiens
ENSMZEG00005006256	-	83	64.069	ENSAPOG00000017310	RNPS1	74	63.478	Acanthochromis_polyacanthus
ENSMZEG00005006256	-	84	72.083	ENSAMEG00000017861	RNPS1	78	64.583	Ailuropoda_melanoleuca
ENSMZEG00005006256	-	93	97.287	ENSACIG00000020701	RNPS1	99	97.287	Amphilophus_citrinellus
ENSMZEG00005006256	-	83	89.035	ENSAPEG00000019263	-	78	78.070	Amphiprion_percula
ENSMZEG00005006256	-	78	67.290	ENSATEG00000000835	RNPS1	91	68.545	Anabas_testudineus
ENSMZEG00005006256	-	83	66.524	ENSATEG00000024267	RNPS1	83	65.086	Anabas_testudineus
ENSMZEG00005006256	-	84	53.138	ENSAPLG00000006231	RNPS1	53	77.391	Anas_platyrhynchos
ENSMZEG00005006256	-	74	66.667	ENSACAG00000004088	RNPS1	84	58.095	Anolis_carolinensis
ENSMZEG00005006256	-	76	69.907	ENSANAG00000029802	-	83	62.037	Aotus_nancymaae
ENSMZEG00005006256	-	85	71.784	ENSANAG00000028802	RNPS1	78	64.167	Aotus_nancymaae
ENSMZEG00005006256	-	83	66.667	ENSACLG00000025942	RNPS1	82	63.913	Astatotilapia_calliptera
ENSMZEG00005006256	-	88	100.000	ENSACLG00000021537	-	92	100.000	Astatotilapia_calliptera
ENSMZEG00005006256	-	83	77.056	ENSAMXG00000006330	-	81	73.500	Astyanax_mexicanus
ENSMZEG00005006256	-	76	71.429	ENSBTAG00000009969	RNPS1	71	62.844	Bos_taurus
ENSMZEG00005006256	-	85	72.199	ENSCJAG00000014969	RNPS1	85	64.730	Callithrix_jacchus
ENSMZEG00005006256	-	84	72.083	ENSCAFG00000019397	RNPS1	78	64.583	Canis_familiaris
ENSMZEG00005006256	-	84	72.083	ENSCAFG00020026159	RNPS1	86	60.891	Canis_lupus_dingo
ENSMZEG00005006256	-	72	69.756	ENSCHIG00000014621	-	69	60.680	Capra_hircus
ENSMZEG00005006256	-	76	69.266	ENSTSYG00000031848	-	89	60.455	Carlito_syrichta
ENSMZEG00005006256	-	85	72.199	ENSTSYG00000001629	RNPS1	85	64.730	Carlito_syrichta
ENSMZEG00005006256	-	84	71.667	ENSCAPG00000007731	RNPS1	78	64.167	Cavia_aperea
ENSMZEG00005006256	-	85	71.784	ENSCPOG00000002066	RNPS1	78	64.167	Cavia_porcellus
ENSMZEG00005006256	-	85	71.784	ENSCCAG00000034480	RNPS1	78	64.167	Cebus_capucinus
ENSMZEG00005006256	-	85	72.199	ENSCATG00000013756	RNPS1	85	64.730	Cercocebus_atys
ENSMZEG00005006256	-	95	67.286	ENSCATG00000042361	-	56	77.391	Cercocebus_atys
ENSMZEG00005006256	-	85	72.199	ENSCLAG00000015546	RNPS1	85	64.730	Chinchilla_lanigera
ENSMZEG00005006256	-	97	72.628	ENSCSAG00000005219	-	81	64.315	Chlorocebus_sabaeus
ENSMZEG00005006256	-	84	70.833	ENSCHOG00000004866	RNPS1	78	63.866	Choloepus_hoffmanni
ENSMZEG00005006256	-	85	72.199	ENSCANG00000041307	RNPS1	85	64.730	Colobus_angolensis_palliatus
ENSMZEG00005006256	-	85	72.199	ENSCGRG00001020431	Rnps1	85	64.730	Cricetulus_griseus_chok1gshd
ENSMZEG00005006256	-	77	71.233	ENSCGRG00000014021	Rnps1	78	63.014	Cricetulus_griseus_crigri
ENSMZEG00005006256	-	83	64.655	ENSCSEG00000015997	RNPS1	80	62.338	Cynoglossus_semilaevis
ENSMZEG00005006256	-	83	86.404	ENSCSEG00000000402	RNPS1	76	78.070	Cynoglossus_semilaevis
ENSMZEG00005006256	-	78	71.429	ENSCVAG00000010868	RNPS1	77	66.820	Cyprinodon_variegatus
ENSMZEG00005006256	-	84	72.083	ENSDNOG00000016081	RNPS1	78	64.583	Dasypus_novemcinctus
ENSMZEG00005006256	-	84	72.083	ENSEASG00005004862	RNPS1	78	64.583	Equus_asinus_asinus
ENSMZEG00005006256	-	74	67.925	ENSECAG00000023288	RNPS1	76	59.434	Equus_caballus
ENSMZEG00005006256	-	85	71.784	ENSFCAG00000007690	RNPS1	80	60.680	Felis_catus
ENSMZEG00005006256	-	84	70.000	ENSFALG00000004868	RNPS1	84	62.500	Ficedula_albicollis
ENSMZEG00005006256	-	85	71.784	ENSFDAG00000003386	RNPS1	78	64.167	Fukomys_damarensis
ENSMZEG00005006256	-	78	66.514	ENSFHEG00000011705	RNPS1	76	63.551	Fundulus_heteroclitus
ENSMZEG00005006256	-	85	70.124	ENSGALG00000009288	RNPS1	85	62.656	Gallus_gallus
ENSMZEG00005006256	-	78	68.203	ENSGAFG00000005457	RNPS1	77	64.055	Gambusia_affinis
ENSMZEG00005006256	-	73	69.231	ENSGGOG00000026421	-	79	60.096	Gorilla_gorilla
ENSMZEG00005006256	-	85	72.199	ENSGGOG00000014275	RNPS1	85	64.730	Gorilla_gorilla
ENSMZEG00005006256	-	99	100.000	ENSHBUG00000017337	-	99	100.000	Haplochromis_burtoni
ENSMZEG00005006256	-	83	66.234	ENSHBUG00000002494	RNPS1	82	63.478	Haplochromis_burtoni
ENSMZEG00005006256	-	85	72.199	ENSHGLG00000013957	RNPS1	85	64.730	Heterocephalus_glaber_female
ENSMZEG00005006256	-	83	66.390	ENSHGLG00000006292	-	91	61.674	Heterocephalus_glaber_female
ENSMZEG00005006256	-	85	72.199	ENSHGLG00100003539	RNPS1	85	64.730	Heterocephalus_glaber_male
ENSMZEG00005006256	-	83	62.288	ENSIPUG00000011746	rnps1	91	62.447	Ictalurus_punctatus
ENSMZEG00005006256	-	83	72.414	ENSKMAG00000009135	RNPS1	82	68.103	Kryptolebias_marmoratus
ENSMZEG00005006256	-	85	72.199	ENSMFAG00000042142	RNPS1	85	64.730	Macaca_fascicularis
ENSMZEG00005006256	-	71	70.098	ENSMMUG00000019238	-	79	61.275	Macaca_mulatta
ENSMZEG00005006256	-	85	72.199	ENSMLEG00000036928	RNPS1	85	64.730	Mandrillus_leucophaeus
ENSMZEG00005006256	-	83	92.105	ENSMAMG00000021148	-	81	92.105	Mastacembelus_armatus
ENSMZEG00005006256	-	83	66.094	ENSMAMG00000021609	-	83	63.636	Mastacembelus_armatus
ENSMZEG00005006256	-	83	66.667	ENSMZEG00005012742	RNPS1	82	63.913	Maylandia_zebra
ENSMZEG00005006256	-	76	68.807	ENSMGAG00000010042	RNPS1	90	60.550	Meleagris_gallopavo
ENSMZEG00005006256	-	85	71.784	ENSMICG00000031543	RNPS1	55	80.870	Microcebus_murinus
ENSMZEG00005006256	-	85	72.199	ENSMOCG00000003429	Rnps1	85	64.730	Microtus_ochrogaster
ENSMZEG00005006256	-	86	79.412	ENSMMOG00000004680	-	77	79.263	Mola_mola
ENSMZEG00005006256	-	76	74.762	ENSMMOG00000010863	RNPS1	76	74.762	Mola_mola
ENSMZEG00005006256	-	84	71.784	ENSMODG00000015891	RNPS1	78	70.954	Monodelphis_domestica
ENSMZEG00005006256	-	85	72.199	ENSMUSG00000034681	Rnps1	85	64.730	Mus_musculus
ENSMZEG00005006256	-	85	72.199	MGP_PahariEiJ_G0023498	Rnps1	85	64.730	Mus_pahari
ENSMZEG00005006256	-	85	72.199	MGP_SPRETEiJ_G0022092	Rnps1	85	64.730	Mus_spretus
ENSMZEG00005006256	-	84	72.083	ENSMLUG00000016808	RNPS1	78	64.583	Myotis_lucifugus
ENSMZEG00005006256	-	85	72.199	ENSNGAG00000023702	Rnps1	85	64.730	Nannospalax_galili
ENSMZEG00005006256	-	76	75.120	ENSNBRG00000023437	RNPS1	75	75.120	Neolamprologus_brichardi
ENSMZEG00005006256	-	88	100.000	ENSNBRG00000014540	-	90	100.000	Neolamprologus_brichardi
ENSMZEG00005006256	-	88	70.800	ENSNLEG00000009243	RNPS1	88	62.557	Nomascus_leucogenys
ENSMZEG00005006256	-	84	72.500	ENSMEUG00000008882	RNPS1	78	65.000	Notamacropus_eugenii
ENSMZEG00005006256	-	84	71.250	ENSOPRG00000016422	RNPS1	78	63.750	Ochotona_princeps
ENSMZEG00005006256	-	100	99.275	ENSONIG00000019627	-	100	99.275	Oreochromis_niloticus
ENSMZEG00005006256	-	83	68.559	ENSORLG00000008033	RNPS1	82	68.559	Oryzias_latipes
ENSMZEG00005006256	-	83	69.298	ENSORLG00020020207	RNPS1	82	69.298	Oryzias_latipes_hni
ENSMZEG00005006256	-	83	68.860	ENSORLG00015000305	-	82	68.860	Oryzias_latipes_hsok
ENSMZEG00005006256	-	84	72.083	ENSOARG00000018056	-	67	64.583	Ovis_aries
ENSMZEG00005006256	-	87	68.548	ENSPPAG00000011845	RNPS1	80	57.212	Pan_paniscus
ENSMZEG00005006256	-	72	69.268	ENSPPAG00000037836	-	86	60.488	Pan_paniscus
ENSMZEG00005006256	-	85	71.784	ENSPPRG00000011255	RNPS1	80	60.680	Panthera_pardus
ENSMZEG00005006256	-	55	69.536	ENSPTIG00000015643	RNPS1	61	80.870	Panthera_tigris_altaica
ENSMZEG00005006256	-	85	71.784	ENSPTRG00000031310	RNPS1	78	64.167	Pan_troglodytes
ENSMZEG00005006256	-	73	69.231	ENSPTRG00000046326	-	81	60.577	Pan_troglodytes
ENSMZEG00005006256	-	85	72.199	ENSPANG00000015748	RNPS1	85	64.730	Papio_anubis
ENSMZEG00005006256	-	85	72.199	ENSPEMG00000012797	Rnps1	85	64.730	Peromyscus_maniculatus_bairdii
ENSMZEG00005006256	-	85	72.614	ENSPCIG00000025012	RNPS1	85	65.145	Phascolarctos_cinereus
ENSMZEG00005006256	-	55	70.861	ENSPCIG00000016114	-	56	79.130	Phascolarctos_cinereus
ENSMZEG00005006256	-	78	69.124	ENSPFOG00000009978	RNPS1	76	65.421	Poecilia_formosa
ENSMZEG00005006256	-	78	69.124	ENSPLAG00000009343	RNPS1	76	65.421	Poecilia_latipinna
ENSMZEG00005006256	-	78	69.124	ENSPMEG00000008552	RNPS1	76	65.421	Poecilia_mexicana
ENSMZEG00005006256	-	78	69.124	ENSPREG00000001843	RNPS1	76	65.421	Poecilia_reticulata
ENSMZEG00005006256	-	84	70.417	ENSPCAG00000004514	RNPS1	78	62.917	Procavia_capensis
ENSMZEG00005006256	-	85	71.784	ENSPCOG00000005478	RNPS1	82	60.784	Propithecus_coquereli
ENSMZEG00005006256	-	84	72.083	ENSPVAG00000005105	RNPS1	78	64.583	Pteropus_vampyrus
ENSMZEG00005006256	-	83	66.667	ENSPNYG00000000585	RNPS1	82	63.913	Pundamilia_nyererei
ENSMZEG00005006256	-	83	63.445	ENSPNAG00000017784	-	83	63.445	Pygocentrus_nattereri
ENSMZEG00005006256	-	84	71.667	ENSRNOG00000008703	Rnps1	78	64.167	Rattus_norvegicus
ENSMZEG00005006256	-	85	72.199	ENSRBIG00000038965	-	88	64.583	Rhinopithecus_bieti
ENSMZEG00005006256	-	85	72.199	ENSRROG00000041252	RNPS1	85	64.730	Rhinopithecus_roxellana
ENSMZEG00005006256	-	85	72.199	ENSSBOG00000027927	RNPS1	85	64.730	Saimiri_boliviensis_boliviensis
ENSMZEG00005006256	-	84	72.500	ENSSHAG00000016951	RNPS1	78	65.000	Sarcophilus_harrisii
ENSMZEG00005006256	-	83	78.017	ENSSFOG00015019341	-	73	67.811	Scleropages_formosus
ENSMZEG00005006256	-	83	65.665	ENSSDUG00000011453	RNPS1	83	64.224	Seriola_dumerili
ENSMZEG00005006256	-	84	69.583	ENSSPUG00000016588	RNPS1	78	62.083	Sphenodon_punctatus
ENSMZEG00005006256	-	76	76.777	ENSSPAG00000005411	-	81	76.777	Stegastes_partitus
ENSMZEG00005006256	-	83	64.255	ENSTRUG00000008602	RNPS1	83	60.086	Takifugu_rubripes
ENSMZEG00005006256	-	88	72.691	ENSTBEG00000009098	RNPS1	88	64.583	Tupaia_belangeri
ENSMZEG00005006256	-	84	72.083	ENSTTRG00000008220	RNPS1	78	64.583	Tursiops_truncatus
ENSMZEG00005006256	-	84	72.083	ENSUAMG00000004462	RNPS1	88	64.583	Ursus_americanus
ENSMZEG00005006256	-	84	72.083	ENSUMAG00000022327	RNPS1	78	64.583	Ursus_maritimus
ENSMZEG00005006256	-	84	72.083	ENSVVUG00000009244	RNPS1	78	64.583	Vulpes_vulpes
ENSMZEG00005006256	-	80	68.398	ENSXETG00000024439	rnps1	71	62.727	Xenopus_tropicalis
ENSMZEG00005006256	-	83	70.259	ENSXMAG00000004827	RNPS1	82	66.379	Xiphophorus_maculatus