EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006308 (Gene tree)
Gene ID: 101473661
Gene Symbol: rbms3
Alias: zgc:153698
Full Name: RNA binding motif single stranded interacting protein 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 121031 bases
Position: chrLG11:9884130-10005160
Accession: 101473661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005008288	RRM_1	PF00076.22	5.4e-32	1	2
ENSMZEP00005008288	RRM_1	PF00076.22	5.4e-32	2	2
ENSMZEP00005008318	RRM_1	PF00076.22	6.9e-29	1	2
ENSMZEP00005008318	RRM_1	PF00076.22	6.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005008620	-	4490	XM_004568054	ENSMZEP00005008288	424 (aa)	XP_004568111	UPI0003299753
ENSMZET00005008651	-	1272	-	ENSMZEP00005008318	423 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005006308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006308	rbms3	100	80.282	ENSG00000144642	RBMS3	100	85.338	Homo_sapiens
ENSMZEG00005006308	rbms3	99	82.506	ENSAPOG00000003432	-	99	82.270	Acanthochromis_polyacanthus
ENSMZEG00005006308	rbms3	100	90.393	ENSAPOG00000007266	rbms3	93	97.396	Acanthochromis_polyacanthus
ENSMZEG00005006308	rbms3	68	75.244	ENSAMEG00000005947	RBMS3	100	75.082	Ailuropoda_melanoleuca
ENSMZEG00005006308	rbms3	87	87.772	ENSACIG00000021113	RBMS3	96	87.772	Amphilophus_citrinellus
ENSMZEG00005006308	rbms3	71	87.086	ENSACIG00000006987	-	81	87.542	Amphilophus_citrinellus
ENSMZEG00005006308	rbms3	99	76.244	ENSAOCG00000024104	-	99	75.792	Amphiprion_ocellaris
ENSMZEG00005006308	rbms3	100	97.424	ENSAOCG00000021274	rbms3	100	97.424	Amphiprion_ocellaris
ENSMZEG00005006308	rbms3	82	97.151	ENSAPEG00000016299	rbms3	93	97.151	Amphiprion_percula
ENSMZEG00005006308	rbms3	99	75.829	ENSAPEG00000009481	-	99	75.829	Amphiprion_percula
ENSMZEG00005006308	rbms3	99	82.506	ENSATEG00000008433	-	99	82.270	Anabas_testudineus
ENSMZEG00005006308	rbms3	100	96.941	ENSATEG00000024295	rbms3	100	96.941	Anabas_testudineus
ENSMZEG00005006308	rbms3	99	78.539	ENSAPLG00000012270	RBMS3	100	78.440	Anas_platyrhynchos
ENSMZEG00005006308	rbms3	100	80.516	ENSACAG00000028664	RBMS3	99	80.282	Anolis_carolinensis
ENSMZEG00005006308	rbms3	100	77.904	ENSANAG00000021899	RBMS3	100	77.677	Aotus_nancymaae
ENSMZEG00005006308	rbms3	100	100.000	ENSACLG00000018506	rbms3	100	100.000	Astatotilapia_calliptera
ENSMZEG00005006308	rbms3	99	75.336	ENSACLG00000008976	-	94	74.888	Astatotilapia_calliptera
ENSMZEG00005006308	rbms3	63	81.132	ENSAMXG00000043770	-	100	81.132	Astyanax_mexicanus
ENSMZEG00005006308	rbms3	100	84.038	ENSAMXG00000020388	rbms3	100	83.803	Astyanax_mexicanus
ENSMZEG00005006308	rbms3	100	80.751	ENSBTAG00000044062	RBMS3	100	80.516	Bos_taurus
ENSMZEG00005006308	rbms3	100	77.904	ENSCJAG00000004312	RBMS3	100	77.677	Callithrix_jacchus
ENSMZEG00005006308	rbms3	100	77.376	ENSCAFG00000005464	RBMS3	99	77.273	Canis_familiaris
ENSMZEG00005006308	rbms3	100	77.376	ENSCAFG00020024980	RBMS3	100	77.273	Canis_lupus_dingo
ENSMZEG00005006308	rbms3	100	80.282	ENSCHIG00000009144	RBMS3	99	80.047	Capra_hircus
ENSMZEG00005006308	rbms3	75	77.844	ENSTSYG00000002615	RBMS3	100	77.545	Carlito_syrichta
ENSMZEG00005006308	rbms3	86	78.474	ENSCAPG00000017783	RBMS3	93	78.202	Cavia_aperea
ENSMZEG00005006308	rbms3	100	80.516	ENSCPOG00000006457	RBMS3	99	80.282	Cavia_porcellus
ENSMZEG00005006308	rbms3	100	77.904	ENSCCAG00000008671	RBMS3	100	77.677	Cebus_capucinus
ENSMZEG00005006308	rbms3	100	77.677	ENSCATG00000013222	RBMS3	100	77.449	Cercocebus_atys
ENSMZEG00005006308	rbms3	100	80.516	ENSCLAG00000005866	RBMS3	99	80.282	Chinchilla_lanigera
ENSMZEG00005006308	rbms3	64	78.102	ENSCSAG00000009655	RBMS3	99	77.737	Chlorocebus_sabaeus
ENSMZEG00005006308	rbms3	86	84.000	ENSCHOG00000000758	RBMS3	81	78.310	Choloepus_hoffmanni
ENSMZEG00005006308	rbms3	100	80.986	ENSCPBG00000022678	RBMS3	99	80.751	Chrysemys_picta_bellii
ENSMZEG00005006308	rbms3	100	77.904	ENSCANG00000032137	RBMS3	100	77.677	Colobus_angolensis_palliatus
ENSMZEG00005006308	rbms3	100	77.230	ENSCGRG00001007243	Rbms3	99	78.169	Cricetulus_griseus_chok1gshd
ENSMZEG00005006308	rbms3	100	77.230	ENSCGRG00000004599	Rbms3	99	78.169	Cricetulus_griseus_crigri
ENSMZEG00005006308	rbms3	100	93.662	ENSCSEG00000010011	RBMS3	100	93.662	Cynoglossus_semilaevis
ENSMZEG00005006308	rbms3	100	82.160	ENSCSEG00000014677	-	94	86.800	Cynoglossus_semilaevis
ENSMZEG00005006308	rbms3	100	92.925	ENSCVAG00000022354	rbms3	100	94.340	Cyprinodon_variegatus
ENSMZEG00005006308	rbms3	99	80.142	ENSCVAG00000022814	-	99	79.669	Cyprinodon_variegatus
ENSMZEG00005006308	rbms3	100	85.176	ENSDARG00000044574	rbms3	89	98.438	Danio_rerio
ENSMZEG00005006308	rbms3	100	79.577	ENSDNOG00000016645	RBMS3	97	79.343	Dasypus_novemcinctus
ENSMZEG00005006308	rbms3	100	80.047	ENSDORG00000007220	Rbms3	99	79.812	Dipodomys_ordii
ENSMZEG00005006308	rbms3	80	64.407	ENSETEG00000009485	-	81	64.407	Echinops_telfairi
ENSMZEG00005006308	rbms3	62	54.511	ENSEBUG00000005830	rbms3	83	55.769	Eptatretus_burgeri
ENSMZEG00005006308	rbms3	100	80.047	ENSEASG00005006152	RBMS3	99	79.812	Equus_asinus_asinus
ENSMZEG00005006308	rbms3	100	80.047	ENSECAG00000017871	RBMS3	99	79.812	Equus_caballus
ENSMZEG00005006308	rbms3	90	71.679	ENSEEUG00000014337	RBMS3	100	71.537	Erinaceus_europaeus
ENSMZEG00005006308	rbms3	90	84.073	ENSELUG00000006905	-	98	86.400	Esox_lucius
ENSMZEG00005006308	rbms3	100	82.629	ENSELUG00000002862	rbms3	100	82.629	Esox_lucius
ENSMZEG00005006308	rbms3	100	79.812	ENSFCAG00000002130	RBMS3	99	79.577	Felis_catus
ENSMZEG00005006308	rbms3	100	80.986	ENSFALG00000009165	RBMS3	99	80.751	Ficedula_albicollis
ENSMZEG00005006308	rbms3	100	80.047	ENSFDAG00000008278	RBMS3	99	79.812	Fukomys_damarensis
ENSMZEG00005006308	rbms3	99	76.485	ENSFHEG00000004787	RBMS3	95	84.824	Fundulus_heteroclitus
ENSMZEG00005006308	rbms3	87	78.228	ENSGMOG00000002600	-	93	78.149	Gadus_morhua
ENSMZEG00005006308	rbms3	100	80.986	ENSGALG00000011439	RBMS3	99	80.751	Gallus_gallus
ENSMZEG00005006308	rbms3	100	94.340	ENSGAFG00000000168	rbms3	100	95.283	Gambusia_affinis
ENSMZEG00005006308	rbms3	99	82.270	ENSGAFG00000003329	-	99	81.797	Gambusia_affinis
ENSMZEG00005006308	rbms3	64	78.545	ENSGAGG00000004039	RBMS3	100	78.182	Gopherus_agassizii
ENSMZEG00005006308	rbms3	100	77.904	ENSGGOG00000007228	RBMS3	100	77.677	Gorilla_gorilla
ENSMZEG00005006308	rbms3	63	98.885	ENSHBUG00000021196	rbms3	94	98.885	Haplochromis_burtoni
ENSMZEG00005006308	rbms3	100	78.781	ENSHBUG00000019785	-	96	78.330	Haplochromis_burtoni
ENSMZEG00005006308	rbms3	100	80.047	ENSHGLG00000002170	RBMS3	99	79.812	Heterocephalus_glaber_female
ENSMZEG00005006308	rbms3	100	80.047	ENSHGLG00100014278	RBMS3	99	79.812	Heterocephalus_glaber_male
ENSMZEG00005006308	rbms3	99	81.132	ENSHCOG00000007894	-	99	80.660	Hippocampus_comes
ENSMZEG00005006308	rbms3	100	82.864	ENSIPUG00000017680	rbms3	100	84.507	Ictalurus_punctatus
ENSMZEG00005006308	rbms3	100	80.516	ENSSTOG00000006324	RBMS3	99	80.282	Ictidomys_tridecemlineatus
ENSMZEG00005006308	rbms3	100	76.995	ENSJJAG00000014708	Rbms3	99	76.761	Jaculus_jaculus
ENSMZEG00005006308	rbms3	99	82.270	ENSKMAG00000012586	-	99	82.033	Kryptolebias_marmoratus
ENSMZEG00005006308	rbms3	100	95.105	ENSKMAG00000020500	rbms3	100	95.105	Kryptolebias_marmoratus
ENSMZEG00005006308	rbms3	99	81.517	ENSLBEG00000027388	-	99	81.754	Labrus_bergylta
ENSMZEG00005006308	rbms3	59	85.171	ENSLBEG00000006677	rbms3	97	85.171	Labrus_bergylta
ENSMZEG00005006308	rbms3	100	82.864	ENSLACG00000010581	RBMS3	100	82.629	Latimeria_chalumnae
ENSMZEG00005006308	rbms3	69	82.653	ENSLOCG00000002328	rbms3	100	82.313	Lepisosteus_oculatus
ENSMZEG00005006308	rbms3	100	77.376	ENSLAFG00000000354	RBMS3	100	77.273	Loxodonta_africana
ENSMZEG00005006308	rbms3	100	80.282	ENSMFAG00000033300	RBMS3	99	80.047	Macaca_fascicularis
ENSMZEG00005006308	rbms3	100	80.282	ENSMMUG00000004404	RBMS3	99	80.047	Macaca_mulatta
ENSMZEG00005006308	rbms3	100	77.904	ENSMNEG00000035839	RBMS3	100	77.677	Macaca_nemestrina
ENSMZEG00005006308	rbms3	100	77.677	ENSMLEG00000029464	RBMS3	100	77.449	Mandrillus_leucophaeus
ENSMZEG00005006308	rbms3	90	85.117	ENSMAMG00000002176	-	83	84.856	Mastacembelus_armatus
ENSMZEG00005006308	rbms3	100	96.714	ENSMAMG00000024043	rbms3	100	96.714	Mastacembelus_armatus
ENSMZEG00005006308	rbms3	100	79.405	ENSMZEG00005026469	-	96	79.405	Maylandia_zebra
ENSMZEG00005006308	rbms3	100	77.230	ENSMAUG00000016436	Rbms3	99	78.169	Mesocricetus_auratus
ENSMZEG00005006308	rbms3	100	77.904	ENSMICG00000049249	RBMS3	100	77.677	Microcebus_murinus
ENSMZEG00005006308	rbms3	100	76.761	ENSMOCG00000006997	Rbms3	99	77.700	Microtus_ochrogaster
ENSMZEG00005006308	rbms3	99	81.517	ENSMMOG00000015071	-	99	81.517	Mola_mola
ENSMZEG00005006308	rbms3	82	97.135	ENSMMOG00000008471	RBMS3	95	97.135	Mola_mola
ENSMZEG00005006308	rbms3	100	72.506	ENSMODG00000015125	RBMS3	99	73.214	Monodelphis_domestica
ENSMZEG00005006308	rbms3	100	96.479	ENSMALG00000019536	RBMS3	100	96.479	Monopterus_albus
ENSMZEG00005006308	rbms3	99	82.979	ENSMALG00000009155	-	99	82.742	Monopterus_albus
ENSMZEG00005006308	rbms3	100	76.761	MGP_CAROLIEiJ_G0032783	Rbms3	99	77.700	Mus_caroli
ENSMZEG00005006308	rbms3	100	77.230	ENSMUSG00000039607	Rbms3	99	78.169	Mus_musculus
ENSMZEG00005006308	rbms3	100	77.049	MGP_PahariEiJ_G0015650	Rbms3	99	77.986	Mus_pahari
ENSMZEG00005006308	rbms3	100	77.230	MGP_SPRETEiJ_G0033930	Rbms3	99	78.169	Mus_spretus
ENSMZEG00005006308	rbms3	100	77.376	ENSMPUG00000011956	RBMS3	100	77.273	Mustela_putorius_furo
ENSMZEG00005006308	rbms3	100	80.282	ENSMLUG00000000659	RBMS3	100	80.047	Myotis_lucifugus
ENSMZEG00005006308	rbms3	100	79.577	ENSNGAG00000014039	Rbms3	99	79.343	Nannospalax_galili
ENSMZEG00005006308	rbms3	99	82.270	ENSNBRG00000018065	-	99	82.033	Neolamprologus_brichardi
ENSMZEG00005006308	rbms3	100	77.904	ENSNLEG00000004129	RBMS3	100	77.677	Nomascus_leucogenys
ENSMZEG00005006308	rbms3	99	70.748	ENSMEUG00000004772	RBMS3	100	71.754	Notamacropus_eugenii
ENSMZEG00005006308	rbms3	99	77.778	ENSOPRG00000006808	RBMS3	85	77.677	Ochotona_princeps
ENSMZEG00005006308	rbms3	100	80.047	ENSODEG00000003651	RBMS3	99	79.812	Octodon_degus
ENSMZEG00005006308	rbms3	100	93.868	ENSONIG00000007172	rbms3	100	96.860	Oreochromis_niloticus
ENSMZEG00005006308	rbms3	100	79.091	ENSOANG00000010529	RBMS3	99	78.409	Ornithorhynchus_anatinus
ENSMZEG00005006308	rbms3	100	76.923	ENSOCUG00000004840	RBMS3	99	76.818	Oryctolagus_cuniculus
ENSMZEG00005006308	rbms3	99	82.742	ENSORLG00000002306	-	99	82.506	Oryzias_latipes
ENSMZEG00005006308	rbms3	100	92.689	ENSORLG00000005370	RBMS3	100	92.453	Oryzias_latipes
ENSMZEG00005006308	rbms3	100	92.689	ENSORLG00020022674	RBMS3	100	92.453	Oryzias_latipes_hni
ENSMZEG00005006308	rbms3	99	82.742	ENSORLG00020008496	-	99	82.506	Oryzias_latipes_hni
ENSMZEG00005006308	rbms3	100	92.217	ENSORLG00015005509	rbms3	100	92.689	Oryzias_latipes_hsok
ENSMZEG00005006308	rbms3	99	82.742	ENSORLG00015015719	-	99	82.506	Oryzias_latipes_hsok
ENSMZEG00005006308	rbms3	100	93.396	ENSOMEG00000014805	RBMS3	100	93.160	Oryzias_melastigma
ENSMZEG00005006308	rbms3	91	81.748	ENSOMEG00000007677	-	95	84.426	Oryzias_melastigma
ENSMZEG00005006308	rbms3	100	76.923	ENSOARG00000014684	RBMS3	99	76.818	Ovis_aries
ENSMZEG00005006308	rbms3	100	77.904	ENSPPAG00000036519	RBMS3	100	77.677	Pan_paniscus
ENSMZEG00005006308	rbms3	100	77.221	ENSPPRG00000002761	RBMS3	100	76.993	Panthera_pardus
ENSMZEG00005006308	rbms3	100	79.577	ENSPTIG00000011568	RBMS3	100	79.343	Panthera_tigris_altaica
ENSMZEG00005006308	rbms3	100	80.282	ENSPTRG00000014709	RBMS3	99	80.047	Pan_troglodytes
ENSMZEG00005006308	rbms3	100	77.677	ENSPANG00000010234	RBMS3	100	77.449	Papio_anubis
ENSMZEG00005006308	rbms3	63	85.283	ENSPKIG00000007989	-	100	85.283	Paramormyrops_kingsleyae
ENSMZEG00005006308	rbms3	100	80.751	ENSPSIG00000005269	RBMS3	99	80.516	Pelodiscus_sinensis
ENSMZEG00005006308	rbms3	82	93.966	ENSPMGG00000021544	rbms3	85	94.801	Periophthalmus_magnuspinnatus
ENSMZEG00005006308	rbms3	91	81.959	ENSPMGG00000021683	-	95	84.658	Periophthalmus_magnuspinnatus
ENSMZEG00005006308	rbms3	99	74.292	ENSPEMG00000001117	Rbms3	100	75.236	Peromyscus_maniculatus_bairdii
ENSMZEG00005006308	rbms3	83	82.486	ENSPCIG00000006106	RBMS3	88	85.915	Phascolarctos_cinereus
ENSMZEG00005006308	rbms3	100	94.340	ENSPFOG00000017887	rbms3	100	95.283	Poecilia_formosa
ENSMZEG00005006308	rbms3	76	93.478	ENSPLAG00000016866	-	83	93.478	Poecilia_latipinna
ENSMZEG00005006308	rbms3	99	82.033	ENSPMEG00000002993	-	99	81.560	Poecilia_mexicana
ENSMZEG00005006308	rbms3	99	93.349	ENSPREG00000011880	rbms3	99	93.824	Poecilia_reticulata
ENSMZEG00005006308	rbms3	87	83.871	ENSPREG00000018221	-	97	84.556	Poecilia_reticulata
ENSMZEG00005006308	rbms3	100	65.385	ENSPPYG00000014050	RBMS3	82	65.227	Pongo_abelii
ENSMZEG00005006308	rbms3	100	58.597	ENSPCAG00000006307	RBMS3	99	58.409	Procavia_capensis
ENSMZEG00005006308	rbms3	100	78.132	ENSPCOG00000017136	RBMS3	100	77.904	Propithecus_coquereli
ENSMZEG00005006308	rbms3	100	69.457	ENSPVAG00000014037	RBMS3	83	78.297	Pteropus_vampyrus
ENSMZEG00005006308	rbms3	99	82.270	ENSPNYG00000012624	-	99	82.033	Pundamilia_nyererei
ENSMZEG00005006308	rbms3	100	99.764	ENSPNYG00000010546	rbms3	100	99.764	Pundamilia_nyererei
ENSMZEG00005006308	rbms3	100	84.038	ENSPNAG00000001800	rbms3	100	83.803	Pygocentrus_nattereri
ENSMZEG00005006308	rbms3	100	77.230	ENSRNOG00000025881	Rbms3	100	78.169	Rattus_norvegicus
ENSMZEG00005006308	rbms3	100	78.132	ENSRBIG00000035863	RBMS3	100	77.904	Rhinopithecus_bieti
ENSMZEG00005006308	rbms3	87	80.628	ENSRROG00000027512	RBMS3	93	80.366	Rhinopithecus_roxellana
ENSMZEG00005006308	rbms3	100	77.904	ENSSBOG00000020232	RBMS3	100	77.677	Saimiri_boliviensis_boliviensis
ENSMZEG00005006308	rbms3	87	76.694	ENSSHAG00000002411	RBMS3	94	77.778	Sarcophilus_harrisii
ENSMZEG00005006308	rbms3	99	83.135	ENSSFOG00015008578	rbms3	99	82.898	Scleropages_formosus
ENSMZEG00005006308	rbms3	100	91.803	ENSSMAG00000004997	rbms3	100	93.750	Scophthalmus_maximus
ENSMZEG00005006308	rbms3	90	84.595	ENSSMAG00000020065	-	93	84.334	Scophthalmus_maximus
ENSMZEG00005006308	rbms3	99	82.506	ENSSDUG00000019287	-	99	82.270	Seriola_dumerili
ENSMZEG00005006308	rbms3	100	96.714	ENSSDUG00000013656	RBMS3	100	96.714	Seriola_dumerili
ENSMZEG00005006308	rbms3	100	96.270	ENSSLDG00000020276	RBMS3	100	96.270	Seriola_lalandi_dorsalis
ENSMZEG00005006308	rbms3	99	82.506	ENSSLDG00000013224	-	99	82.270	Seriola_lalandi_dorsalis
ENSMZEG00005006308	rbms3	57	91.626	ENSSARG00000000695	RBMS3	92	68.235	Sorex_araneus
ENSMZEG00005006308	rbms3	69	77.076	ENSSPUG00000017197	RBMS3	98	76.923	Sphenodon_punctatus
ENSMZEG00005006308	rbms3	99	75.339	ENSSPAG00000003983	-	99	74.887	Stegastes_partitus
ENSMZEG00005006308	rbms3	100	97.424	ENSSPAG00000020693	rbms3	100	97.424	Stegastes_partitus
ENSMZEG00005006308	rbms3	100	80.047	ENSSSCG00000036381	RBMS3	99	79.812	Sus_scrofa
ENSMZEG00005006308	rbms3	75	77.745	ENSTGUG00000003572	RBMS3	100	77.612	Taeniopygia_guttata
ENSMZEG00005006308	rbms3	99	71.264	ENSTRUG00000007482	-	99	72.941	Takifugu_rubripes
ENSMZEG00005006308	rbms3	100	93.662	ENSTRUG00000021719	RBMS3	100	93.662	Takifugu_rubripes
ENSMZEG00005006308	rbms3	77	81.579	ENSTBEG00000005362	RBMS3	92	81.471	Tupaia_belangeri
ENSMZEG00005006308	rbms3	99	76.871	ENSTTRG00000006202	RBMS3	100	76.765	Tursiops_truncatus
ENSMZEG00005006308	rbms3	100	77.376	ENSUMAG00000000263	RBMS3	99	77.273	Ursus_maritimus
ENSMZEG00005006308	rbms3	87	70.052	ENSVPAG00000003842	RBMS3	92	69.895	Vicugna_pacos
ENSMZEG00005006308	rbms3	87	79.740	ENSVVUG00000004660	RBMS3	90	91.866	Vulpes_vulpes
ENSMZEG00005006308	rbms3	69	74.598	ENSXETG00000032055	RBMS3	99	74.434	Xenopus_tropicalis
ENSMZEG00005006308	rbms3	91	67.595	ENSXCOG00000019600	-	95	69.086	Xiphophorus_couchianus
ENSMZEG00005006308	rbms3	99	82.270	ENSXMAG00000014382	-	99	81.797	Xiphophorus_maculatus
ENSMZEG00005006308	rbms3	100	93.868	ENSXMAG00000021783	rbms3	100	93.868	Xiphophorus_maculatus