EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006479 (Gene tree)
Gene ID: 101478616
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 13251 bases
Position: chrLG1:8704241-8717491
Accession: 101478616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005008498	zf-C2H2	PF00096.26	2e-35	1	6
ENSMZEP00005008498	zf-C2H2	PF00096.26	2e-35	2	6
ENSMZEP00005008498	zf-C2H2	PF00096.26	2e-35	3	6
ENSMZEP00005008498	zf-C2H2	PF00096.26	2e-35	4	6
ENSMZEP00005008498	zf-C2H2	PF00096.26	2e-35	5	6
ENSMZEP00005008498	zf-C2H2	PF00096.26	2e-35	6	6
ENSMZEP00005008490	zf-C2H2	PF00096.26	2.8e-33	1	6
ENSMZEP00005008490	zf-C2H2	PF00096.26	2.8e-33	2	6
ENSMZEP00005008490	zf-C2H2	PF00096.26	2.8e-33	3	6
ENSMZEP00005008490	zf-C2H2	PF00096.26	2.8e-33	4	6
ENSMZEP00005008490	zf-C2H2	PF00096.26	2.8e-33	5	6
ENSMZEP00005008490	zf-C2H2	PF00096.26	2.8e-33	6	6
ENSMZEP00005008498	zf-met	PF12874.7	2.5e-22	1	5
ENSMZEP00005008498	zf-met	PF12874.7	2.5e-22	2	5
ENSMZEP00005008498	zf-met	PF12874.7	2.5e-22	3	5
ENSMZEP00005008498	zf-met	PF12874.7	2.5e-22	4	5
ENSMZEP00005008498	zf-met	PF12874.7	2.5e-22	5	5
ENSMZEP00005008490	zf-met	PF12874.7	5.3e-22	1	5
ENSMZEP00005008490	zf-met	PF12874.7	5.3e-22	2	5
ENSMZEP00005008490	zf-met	PF12874.7	5.3e-22	3	5
ENSMZEP00005008490	zf-met	PF12874.7	5.3e-22	4	5
ENSMZEP00005008490	zf-met	PF12874.7	5.3e-22	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005008838	-	6184	-	ENSMZEP00005008498	1209 (aa)	-	-
ENSMZET00005008830	-	6925	XM_004539691	ENSMZEP00005008490	1305 (aa)	XP_004539748	UPI000D325422

Gene Model

Click here to download ENSMZEG00005006479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006479	sall1a	99	67.913	ENSG00000103449	SALL1	100	68.212	Homo_sapiens
ENSMZEG00005006479	sall1a	100	93.803	ENSAPOG00000022764	sall1a	100	93.803	Acanthochromis_polyacanthus
ENSMZEG00005006479	sall1a	99	67.233	ENSAMEG00000006817	SALL1	100	66.940	Ailuropoda_melanoleuca
ENSMZEG00005006479	sall1a	100	96.628	ENSACIG00000004231	sall1a	100	96.628	Amphilophus_citrinellus
ENSMZEG00005006479	sall1a	100	94.109	ENSAOCG00000002800	sall1a	100	94.109	Amphiprion_ocellaris
ENSMZEG00005006479	sall1a	100	93.803	ENSAPEG00000010179	sall1a	100	93.803	Amphiprion_percula
ENSMZEG00005006479	sall1a	99	91.884	ENSATEG00000003006	sall1a	100	91.495	Anabas_testudineus
ENSMZEG00005006479	sall1a	100	69.173	ENSAPLG00000003356	SALL1	100	69.451	Anas_platyrhynchos
ENSMZEG00005006479	sall1a	99	68.127	ENSACAG00000014399	SALL1	97	67.375	Anolis_carolinensis
ENSMZEG00005006479	sall1a	99	67.769	ENSANAG00000027238	SALL1	100	68.342	Aotus_nancymaae
ENSMZEG00005006479	sall1a	100	99.923	ENSACLG00000017148	sall1a	100	99.923	Astatotilapia_calliptera
ENSMZEG00005006479	sall1a	99	51.488	ENSAMXG00000017702	sall1b	99	52.184	Astyanax_mexicanus
ENSMZEG00005006479	sall1a	100	80.030	ENSAMXG00000018599	sall1a	100	80.488	Astyanax_mexicanus
ENSMZEG00005006479	sall1a	100	67.216	ENSBTAG00000008544	SALL1	100	67.667	Bos_taurus
ENSMZEG00005006479	sall1a	99	68.090	ENSCJAG00000001740	SALL1	100	68.661	Callithrix_jacchus
ENSMZEG00005006479	sall1a	99	67.449	ENSCAFG00000009755	SALL1	100	67.790	Canis_familiaris
ENSMZEG00005006479	sall1a	99	67.449	ENSCAFG00020002842	SALL1	100	67.790	Canis_lupus_dingo
ENSMZEG00005006479	sall1a	100	67.191	ENSCHIG00000026074	SALL1	100	67.616	Capra_hircus
ENSMZEG00005006479	sall1a	99	68.413	ENSTSYG00000029464	SALL1	100	68.413	Carlito_syrichta
ENSMZEG00005006479	sall1a	99	67.797	ENSCPOG00000006564	SALL1	100	67.912	Cavia_porcellus
ENSMZEG00005006479	sall1a	99	66.217	ENSCCAG00000001639	SALL1	100	66.642	Cebus_capucinus
ENSMZEG00005006479	sall1a	99	67.988	ENSCATG00000004982	SALL1	100	68.559	Cercocebus_atys
ENSMZEG00005006479	sall1a	99	67.537	ENSCLAG00000006380	SALL1	100	67.636	Chinchilla_lanigera
ENSMZEG00005006479	sall1a	99	67.390	ENSCSAG00000005319	SALL1	100	67.812	Chlorocebus_sabaeus
ENSMZEG00005006479	sall1a	70	66.004	ENSCHOG00000000800	-	69	66.337	Choloepus_hoffmanni
ENSMZEG00005006479	sall1a	100	68.769	ENSCPBG00000015924	SALL1	100	69.121	Chrysemys_picta_bellii
ENSMZEG00005006479	sall1a	99	68.212	ENSCANG00000036664	SALL1	100	68.867	Colobus_angolensis_palliatus
ENSMZEG00005006479	sall1a	99	66.317	ENSCGRG00001023314	-	100	67.091	Cricetulus_griseus_chok1gshd
ENSMZEG00005006479	sall1a	99	66.181	ENSCGRG00000009496	Sall1	100	66.743	Cricetulus_griseus_crigri
ENSMZEG00005006479	sall1a	99	89.786	ENSCSEG00000009349	sall1a	99	89.771	Cynoglossus_semilaevis
ENSMZEG00005006479	sall1a	90	90.112	ENSCVAG00000020513	sall1a	99	90.112	Cyprinodon_variegatus
ENSMZEG00005006479	sall1a	99	48.048	ENSDARG00000075891	sall1b	99	47.068	Danio_rerio
ENSMZEG00005006479	sall1a	100	78.691	ENSDARG00000074319	sall1a	100	78.311	Danio_rerio
ENSMZEG00005006479	sall1a	99	68.145	ENSDNOG00000016413	SALL1	100	67.913	Dasypus_novemcinctus
ENSMZEG00005006479	sall1a	99	67.583	ENSETEG00000015150	SALL1	100	67.688	Echinops_telfairi
ENSMZEG00005006479	sall1a	64	63.462	ENSEBUG00000011732	SALL1	97	63.462	Eptatretus_burgeri
ENSMZEG00005006479	sall1a	67	40.632	ENSEBUG00000008798	SALL1	67	41.223	Eptatretus_burgeri
ENSMZEG00005006479	sall1a	99	67.814	ENSEASG00005014602	SALL1	100	67.967	Equus_asinus_asinus
ENSMZEG00005006479	sall1a	90	65.870	ENSECAG00000011334	SALL1	99	66.005	Equus_caballus
ENSMZEG00005006479	sall1a	99	67.340	ENSEEUG00000002014	SALL1	100	67.661	Erinaceus_europaeus
ENSMZEG00005006479	sall1a	100	54.395	ENSELUG00000017774	-	100	54.634	Esox_lucius
ENSMZEG00005006479	sall1a	100	76.923	ENSELUG00000006159	sall1a	100	76.995	Esox_lucius
ENSMZEG00005006479	sall1a	99	66.592	ENSFCAG00000024654	SALL1	100	66.617	Felis_catus
ENSMZEG00005006479	sall1a	100	69.451	ENSFALG00000000074	SALL1	100	69.503	Ficedula_albicollis
ENSMZEG00005006479	sall1a	75	63.265	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSMZEG00005006479	sall1a	100	91.125	ENSFHEG00000012579	sall1a	100	91.125	Fundulus_heteroclitus
ENSMZEG00005006479	sall1a	100	83.841	ENSGMOG00000006103	sall1a	100	83.841	Gadus_morhua
ENSMZEG00005006479	sall1a	97	40.355	ENSGMOG00000013383	-	73	45.427	Gadus_morhua
ENSMZEG00005006479	sall1a	100	69.300	ENSGALG00000039238	SALL1	100	69.202	Gallus_gallus
ENSMZEG00005006479	sall1a	100	91.597	ENSGAFG00000009964	sall1a	100	91.597	Gambusia_affinis
ENSMZEG00005006479	sall1a	99	90.199	ENSGACG00000016702	sall1a	99	90.199	Gasterosteus_aculeatus
ENSMZEG00005006479	sall1a	100	68.544	ENSGAGG00000013979	SALL1	100	69.121	Gopherus_agassizii
ENSMZEG00005006479	sall1a	99	67.838	ENSGGOG00000000663	SALL1	100	68.138	Gorilla_gorilla
ENSMZEG00005006479	sall1a	100	99.693	ENSHBUG00000022005	sall1a	100	99.693	Haplochromis_burtoni
ENSMZEG00005006479	sall1a	99	67.886	ENSHGLG00000004288	-	100	68.009	Heterocephalus_glaber_female
ENSMZEG00005006479	sall1a	99	67.886	ENSHGLG00100017496	SALL1	100	68.009	Heterocephalus_glaber_male
ENSMZEG00005006479	sall1a	100	84.242	ENSHCOG00000000974	sall1a	100	83.623	Hippocampus_comes
ENSMZEG00005006479	sall1a	100	79.359	ENSIPUG00000016265	SALL1	100	78.642	Ictalurus_punctatus
ENSMZEG00005006479	sall1a	99	50.328	ENSIPUG00000022928	sall1b	99	49.659	Ictalurus_punctatus
ENSMZEG00005006479	sall1a	99	67.857	ENSSTOG00000020885	SALL1	100	68.155	Ictidomys_tridecemlineatus
ENSMZEG00005006479	sall1a	100	92.568	ENSKMAG00000016681	sall1a	100	92.502	Kryptolebias_marmoratus
ENSMZEG00005006479	sall1a	99	90.182	ENSLBEG00000012207	sall1a	95	90.290	Labrus_bergylta
ENSMZEG00005006479	sall1a	99	39.597	ENSLACG00000014018	-	93	39.476	Latimeria_chalumnae
ENSMZEG00005006479	sall1a	100	68.726	ENSLACG00000003556	SALL1	100	69.329	Latimeria_chalumnae
ENSMZEG00005006479	sall1a	100	77.005	ENSLOCG00000007283	sall1b	100	76.929	Lepisosteus_oculatus
ENSMZEG00005006479	sall1a	99	67.851	ENSLAFG00000015251	SALL1	100	68.015	Loxodonta_africana
ENSMZEG00005006479	sall1a	99	68.114	ENSMFAG00000003298	SALL1	100	68.586	Macaca_fascicularis
ENSMZEG00005006479	sall1a	99	67.797	ENSMMUG00000017200	SALL1	100	68.306	Macaca_mulatta
ENSMZEG00005006479	sall1a	99	68.065	ENSMNEG00000034770	SALL1	100	68.145	Macaca_nemestrina
ENSMZEG00005006479	sall1a	99	68.362	ENSMLEG00000036406	SALL1	100	68.661	Mandrillus_leucophaeus
ENSMZEG00005006479	sall1a	99	92.961	ENSMAMG00000004164	sall1a	99	92.961	Mastacembelus_armatus
ENSMZEG00005006479	sall1a	100	68.912	ENSMGAG00000004704	SALL1	100	68.918	Meleagris_gallopavo
ENSMZEG00005006479	sall1a	99	66.290	ENSMAUG00000019093	Sall1	100	66.541	Mesocricetus_auratus
ENSMZEG00005006479	sall1a	100	67.742	ENSMICG00000036486	SALL1	100	67.793	Microcebus_murinus
ENSMZEG00005006479	sall1a	99	91.181	ENSMMOG00000016400	sall1a	99	91.181	Mola_mola
ENSMZEG00005006479	sall1a	99	68.876	ENSMODG00000013114	SALL1	99	69.046	Monodelphis_domestica
ENSMZEG00005006479	sall1a	99	92.343	ENSMALG00000013400	sall1a	99	92.343	Monopterus_albus
ENSMZEG00005006479	sall1a	99	66.122	MGP_CAROLIEiJ_G0031362	Sall1	100	66.469	Mus_caroli
ENSMZEG00005006479	sall1a	99	65.924	ENSMUSG00000031665	Sall1	100	66.444	Mus_musculus
ENSMZEG00005006479	sall1a	99	66.270	MGP_PahariEiJ_G0022961	Sall1	100	66.716	Mus_pahari
ENSMZEG00005006479	sall1a	99	65.924	MGP_SPRETEiJ_G0032480	Sall1	100	66.444	Mus_spretus
ENSMZEG00005006479	sall1a	99	67.044	ENSMPUG00000003265	SALL1	96	67.072	Mustela_putorius_furo
ENSMZEG00005006479	sall1a	100	65.217	ENSMLUG00000015541	SALL1	99	66.080	Myotis_lucifugus
ENSMZEG00005006479	sall1a	100	99.310	ENSNBRG00000009307	sall1a	100	99.310	Neolamprologus_brichardi
ENSMZEG00005006479	sall1a	94	80.447	ENSNLEG00000001008	SALL1	99	80.000	Nomascus_leucogenys
ENSMZEG00005006479	sall1a	99	68.947	ENSMEUG00000012206	SALL1	99	68.901	Notamacropus_eugenii
ENSMZEG00005006479	sall1a	87	71.912	ENSOPRG00000005645	SALL1	71	71.681	Ochotona_princeps
ENSMZEG00005006479	sall1a	99	67.643	ENSODEG00000003685	SALL1	100	67.766	Octodon_degus
ENSMZEG00005006479	sall1a	100	98.851	ENSONIG00000002831	sall1a	100	98.851	Oreochromis_niloticus
ENSMZEG00005006479	sall1a	100	59.938	ENSOANG00000013399	SALL1	96	76.230	Ornithorhynchus_anatinus
ENSMZEG00005006479	sall1a	100	90.819	ENSORLG00000013827	sall1a	100	91.216	Oryzias_latipes
ENSMZEG00005006479	sall1a	100	90.819	ENSORLG00020020570	sall1a	100	90.819	Oryzias_latipes_hni
ENSMZEG00005006479	sall1a	100	90.669	ENSORLG00015018830	sall1a	100	91.132	Oryzias_latipes_hsok
ENSMZEG00005006479	sall1a	100	90.669	ENSOMEG00000016043	sall1a	100	90.669	Oryzias_melastigma
ENSMZEG00005006479	sall1a	99	67.937	ENSOGAG00000027316	SALL1	100	68.039	Otolemur_garnettii
ENSMZEG00005006479	sall1a	100	63.521	ENSOARG00000017583	SALL1	100	63.889	Ovis_aries
ENSMZEG00005006479	sall1a	99	49.962	ENSPPAG00000035136	-	99	49.441	Pan_paniscus
ENSMZEG00005006479	sall1a	99	67.742	ENSPPAG00000035657	SALL1	100	68.345	Pan_paniscus
ENSMZEG00005006479	sall1a	100	66.468	ENSPPRG00000023283	SALL1	100	66.542	Panthera_pardus
ENSMZEG00005006479	sall1a	89	69.646	ENSPTIG00000013539	-	94	68.991	Panthera_tigris_altaica
ENSMZEG00005006479	sall1a	99	67.865	ENSPTRG00000008108	SALL1	100	68.287	Pan_troglodytes
ENSMZEG00005006479	sall1a	99	50.000	ENSPTRG00000045256	-	99	49.924	Pan_troglodytes
ENSMZEG00005006479	sall1a	99	68.287	ENSPANG00000024176	SALL1	100	68.586	Papio_anubis
ENSMZEG00005006479	sall1a	100	70.129	ENSPKIG00000005383	-	100	70.508	Paramormyrops_kingsleyae
ENSMZEG00005006479	sall1a	100	71.627	ENSPKIG00000022251	sall1a	100	71.645	Paramormyrops_kingsleyae
ENSMZEG00005006479	sall1a	100	69.300	ENSPSIG00000008582	SALL1	100	69.277	Pelodiscus_sinensis
ENSMZEG00005006479	sall1a	99	85.974	ENSPMGG00000021788	sall1a	99	84.592	Periophthalmus_magnuspinnatus
ENSMZEG00005006479	sall1a	99	49.094	ENSPMAG00000008148	sall1b	73	54.453	Petromyzon_marinus
ENSMZEG00005006479	sall1a	99	69.069	ENSPCIG00000017840	SALL1	99	68.901	Phascolarctos_cinereus
ENSMZEG00005006479	sall1a	100	91.509	ENSPFOG00000015799	sall1a	96	91.608	Poecilia_formosa
ENSMZEG00005006479	sall1a	100	91.902	ENSPLAG00000022539	sall1a	100	91.902	Poecilia_latipinna
ENSMZEG00005006479	sall1a	100	92.055	ENSPMEG00000020894	sall1a	100	92.055	Poecilia_mexicana
ENSMZEG00005006479	sall1a	100	91.520	ENSPREG00000006802	sall1a	100	91.520	Poecilia_reticulata
ENSMZEG00005006479	sall1a	90	66.751	ENSPPYG00000007345	SALL1	96	67.366	Pongo_abelii
ENSMZEG00005006479	sall1a	85	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSMZEG00005006479	sall1a	99	67.568	ENSPCOG00000028192	SALL1	100	67.991	Propithecus_coquereli
ENSMZEG00005006479	sall1a	72	69.364	ENSPVAG00000015374	SALL1	100	69.444	Pteropus_vampyrus
ENSMZEG00005006479	sall1a	100	99.847	ENSPNYG00000010865	sall1a	100	99.847	Pundamilia_nyererei
ENSMZEG00005006479	sall1a	100	78.370	ENSPNAG00000023644	sall1a	100	78.827	Pygocentrus_nattereri
ENSMZEG00005006479	sall1a	99	53.263	ENSPNAG00000007442	sall1b	99	53.158	Pygocentrus_nattereri
ENSMZEG00005006479	sall1a	99	66.517	ENSRNOG00000013907	Sall1	100	66.366	Rattus_norvegicus
ENSMZEG00005006479	sall1a	99	67.742	ENSRBIG00000015707	SALL1	100	68.498	Rhinopithecus_bieti
ENSMZEG00005006479	sall1a	99	67.742	ENSRROG00000035777	SALL1	100	68.498	Rhinopithecus_roxellana
ENSMZEG00005006479	sall1a	99	68.039	ENSSBOG00000032186	SALL1	100	68.661	Saimiri_boliviensis_boliviensis
ENSMZEG00005006479	sall1a	99	68.775	ENSSHAG00000009477	SALL1	99	68.548	Sarcophilus_harrisii
ENSMZEG00005006479	sall1a	100	72.810	ENSSFOG00015020020	sall1a	100	72.734	Scleropages_formosus
ENSMZEG00005006479	sall1a	100	71.801	ENSSFOG00015001590	sall1a	99	71.880	Scleropages_formosus
ENSMZEG00005006479	sall1a	99	92.420	ENSSMAG00000009160	sall1a	99	92.420	Scophthalmus_maximus
ENSMZEG00005006479	sall1a	99	94.028	ENSSDUG00000006507	sall1a	99	94.028	Seriola_dumerili
ENSMZEG00005006479	sall1a	76	57.143	ENSSDUG00000000748	sall1b	99	57.143	Seriola_dumerili
ENSMZEG00005006479	sall1a	99	93.951	ENSSLDG00000017721	sall1a	99	93.951	Seriola_lalandi_dorsalis
ENSMZEG00005006479	sall1a	99	66.774	ENSSARG00000000661	SALL1	99	67.383	Sorex_araneus
ENSMZEG00005006479	sall1a	100	68.647	ENSSPUG00000000156	SALL1	100	69.323	Sphenodon_punctatus
ENSMZEG00005006479	sall1a	100	93.960	ENSSPAG00000021615	sall1a	100	93.960	Stegastes_partitus
ENSMZEG00005006479	sall1a	99	66.935	ENSSSCG00000002836	SALL1	100	67.016	Sus_scrofa
ENSMZEG00005006479	sall1a	100	69.225	ENSTGUG00000007514	SALL1	100	69.352	Taeniopygia_guttata
ENSMZEG00005006479	sall1a	91	87.594	ENSTRUG00000008950	sall1a	100	87.594	Takifugu_rubripes
ENSMZEG00005006479	sall1a	92	86.144	ENSTNIG00000004257	sall1a	100	86.144	Tetraodon_nigroviridis
ENSMZEG00005006479	sall1a	78	77.241	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSMZEG00005006479	sall1a	90	65.938	ENSUAMG00000023379	-	92	65.750	Ursus_americanus
ENSMZEG00005006479	sall1a	90	65.968	ENSVVUG00000019383	-	99	66.387	Vulpes_vulpes
ENSMZEG00005006479	sall1a	86	61.538	ENSXETG00000017176	sall2	84	61.538	Xenopus_tropicalis
ENSMZEG00005006479	sall1a	100	66.801	ENSXETG00000018417	sall1	100	65.348	Xenopus_tropicalis
ENSMZEG00005006479	sall1a	100	91.749	ENSXMAG00000016273	sall1a	100	91.749	Xiphophorus_maculatus