EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006498 (Gene tree)
Gene ID: 106676509
Gene Symbol: -
Alias: -
Full Name: la-related protein 4B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 52186 bases
Position: chrAGTA05000171.1:2594-54779
Accession: 106676509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005008593	La	PF05383.17	1.2e-13	1	1
ENSMZEP00005008568	La	PF05383.17	1.4e-13	1	1
ENSMZEP00005008559	La	PF05383.17	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005008908	-	2749	XM_024799868	ENSMZEP00005008568	614 (aa)	XP_024655636	-
ENSMZET00005008899	-	2010	-	ENSMZEP00005008559	669 (aa)	-	-
ENSMZET00005008931	-	2584	-	ENSMZEP00005008593	559 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005006498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006498	-	96	62.219	ENSG00000107929	LARP4B	80	62.701	Homo_sapiens
ENSMZEG00005006498	-	95	92.655	ENSAPOG00000020531	LARP4B	89	93.156	Acanthochromis_polyacanthus
ENSMZEG00005006498	-	96	59.646	ENSAMEG00000001810	LARP4B	80	61.750	Ailuropoda_melanoleuca
ENSMZEG00005006498	-	95	93.032	ENSAOCG00000007887	-	94	93.536	Amphiprion_ocellaris
ENSMZEG00005006498	-	95	91.002	ENSAPEG00000002512	LARP4B	76	91.267	Amphiprion_percula
ENSMZEG00005006498	-	93	91.841	ENSATEG00000012614	LARP4B	89	80.721	Anabas_testudineus
ENSMZEG00005006498	-	96	64.490	ENSAPLG00000003813	LARP4B	78	65.074	Anas_platyrhynchos
ENSMZEG00005006498	-	97	65.517	ENSACAG00000002858	LARP4B	100	56.400	Anolis_carolinensis
ENSMZEG00005006498	-	97	61.465	ENSANAG00000007531	-	81	62.158	Aotus_nancymaae
ENSMZEG00005006498	-	98	98.847	ENSACLG00000026356	LARP4B	100	93.421	Astatotilapia_calliptera
ENSMZEG00005006498	-	95	59.174	ENSAMXG00000003335	larp4b	81	57.947	Astyanax_mexicanus
ENSMZEG00005006498	-	96	62.944	ENSBTAG00000013899	LARP4B	100	56.233	Bos_taurus
ENSMZEG00005006498	-	91	63.514	ENSCJAG00000018434	LARP4B	81	62.963	Callithrix_jacchus
ENSMZEG00005006498	-	96	60.611	ENSCAFG00020004209	LARP4B	80	62.237	Canis_lupus_dingo
ENSMZEG00005006498	-	96	60.572	ENSCHIG00000013543	LARP4B	80	61.364	Capra_hircus
ENSMZEG00005006498	-	81	70.236	ENSTSYG00000002568	LARP4B	100	61.897	Carlito_syrichta
ENSMZEG00005006498	-	89	57.973	ENSCAPG00000009725	LARP4B	82	57.807	Cavia_aperea
ENSMZEG00005006498	-	96	61.290	ENSCPOG00000009375	LARP4B	81	62.136	Cavia_porcellus
ENSMZEG00005006498	-	96	61.254	ENSCCAG00000024869	LARP4B	81	61.997	Cebus_capucinus
ENSMZEG00005006498	-	96	62.379	ENSCATG00000019750	LARP4B	80	62.641	Cercocebus_atys
ENSMZEG00005006498	-	93	75.862	ENSCLAG00000011570	LARP4B	87	75.000	Chinchilla_lanigera
ENSMZEG00005006498	-	65	88.889	ENSCHOG00000007831	-	56	88.889	Choloepus_hoffmanni
ENSMZEG00005006498	-	96	65.512	ENSCPBG00000017063	LARP4B	88	65.139	Chrysemys_picta_bellii
ENSMZEG00005006498	-	96	59.968	ENSCANG00000038021	LARP4B	80	60.225	Colobus_angolensis_palliatus
ENSMZEG00005006498	-	96	60.256	ENSCGRG00001022930	Larp4b	86	61.630	Cricetulus_griseus_chok1gshd
ENSMZEG00005006498	-	93	72.414	ENSCGRG00000006022	Larp4b	86	61.630	Cricetulus_griseus_crigri
ENSMZEG00005006498	-	89	86.706	ENSCSEG00000007342	LARP4B	100	74.631	Cynoglossus_semilaevis
ENSMZEG00005006498	-	95	91.353	ENSCVAG00000008910	LARP4B	100	74.198	Cyprinodon_variegatus
ENSMZEG00005006498	-	99	57.805	ENSDARG00000062146	larp4b	81	59.401	Danio_rerio
ENSMZEG00005006498	-	94	59.310	ENSDNOG00000045543	-	100	63.022	Dasypus_novemcinctus
ENSMZEG00005006498	-	93	75.862	ENSDORG00000009328	Larp4b	82	75.862	Dipodomys_ordii
ENSMZEG00005006498	-	79	70.370	ENSETEG00000011249	LARP4B	76	70.370	Echinops_telfairi
ENSMZEG00005006498	-	96	60.514	ENSEASG00005019068	-	80	61.912	Equus_asinus_asinus
ENSMZEG00005006498	-	96	60.674	ENSECAG00000024040	LARP4B	80	61.912	Equus_caballus
ENSMZEG00005006498	-	96	59.618	ENSEEUG00000008391	LARP4B	79	60.905	Erinaceus_europaeus
ENSMZEG00005006498	-	84	48.323	ENSELUG00000001417	-	77	48.425	Esox_lucius
ENSMZEG00005006498	-	93	93.103	ENSELUG00000008626	LARP4B	86	93.103	Esox_lucius
ENSMZEG00005006498	-	95	60.940	ENSFCAG00000000721	-	80	62.480	Felis_catus
ENSMZEG00005006498	-	96	66.832	ENSFALG00000006961	LARP4B	88	65.049	Ficedula_albicollis
ENSMZEG00005006498	-	93	75.862	ENSFDAG00000006158	LARP4B	78	62.701	Fukomys_damarensis
ENSMZEG00005006498	-	56	46.875	ENSFHEG00000011539	-	60	51.237	Fundulus_heteroclitus
ENSMZEG00005006498	-	100	67.123	ENSFHEG00000013037	LARP4B	100	67.538	Fundulus_heteroclitus
ENSMZEG00005006498	-	86	67.978	ENSGMOG00000010818	-	88	66.239	Gadus_morhua
ENSMZEG00005006498	-	92	83.333	ENSGALG00000006672	LARP4B	79	66.553	Gallus_gallus
ENSMZEG00005006498	-	98	78.106	ENSGACG00000017535	LARP4B	78	79.006	Gasterosteus_aculeatus
ENSMZEG00005006498	-	83	70.825	ENSGAGG00000008598	LARP4B	86	64.975	Gopherus_agassizii
ENSMZEG00005006498	-	96	62.219	ENSGGOG00000003572	LARP4B	80	62.701	Gorilla_gorilla
ENSMZEG00005006498	-	98	99.666	ENSHBUG00000007535	LARP4B	100	83.426	Haplochromis_burtoni
ENSMZEG00005006498	-	93	75.862	ENSHGLG00000012936	LARP4B	82	75.862	Heterocephalus_glaber_female
ENSMZEG00005006498	-	96	61.897	ENSHGLG00100016220	-	80	63.344	Heterocephalus_glaber_male
ENSMZEG00005006498	-	90	56.261	ENSHGLG00100017261	-	89	55.898	Heterocephalus_glaber_male
ENSMZEG00005006498	-	99	73.343	ENSHCOG00000011581	LARP4B	89	73.343	Hippocampus_comes
ENSMZEG00005006498	-	97	56.129	ENSIPUG00000009705	larp4b	81	57.522	Ictalurus_punctatus
ENSMZEG00005006498	-	93	75.862	ENSSTOG00000000587	LARP4B	84	75.862	Ictidomys_tridecemlineatus
ENSMZEG00005006498	-	93	75.862	ENSJJAG00000020847	Larp4b	80	62.399	Jaculus_jaculus
ENSMZEG00005006498	-	95	92.655	ENSKMAG00000021674	LARP4B	100	76.184	Kryptolebias_marmoratus
ENSMZEG00005006498	-	95	90.924	ENSLBEG00000025293	-	82	91.092	Labrus_bergylta
ENSMZEG00005006498	-	89	63.607	ENSLACG00000009492	LARP4B	87	63.768	Latimeria_chalumnae
ENSMZEG00005006498	-	91	96.429	ENSLOCG00000012290	larp4b	81	96.429	Lepisosteus_oculatus
ENSMZEG00005006498	-	93	82.759	ENSLAFG00000015334	LARP4B	84	82.759	Loxodonta_africana
ENSMZEG00005006498	-	96	62.379	ENSMFAG00000001766	LARP4B	80	60.225	Macaca_fascicularis
ENSMZEG00005006498	-	96	62.379	ENSMMUG00000005279	LARP4B	80	62.641	Macaca_mulatta
ENSMZEG00005006498	-	96	62.219	ENSMNEG00000014019	LARP4B	80	60.064	Macaca_nemestrina
ENSMZEG00005006498	-	96	62.379	ENSMLEG00000035198	LARP4B	81	62.641	Mandrillus_leucophaeus
ENSMZEG00005006498	-	97	89.951	ENSMAMG00000013742	LARP4B	89	81.633	Mastacembelus_armatus
ENSMZEG00005006498	-	90	100.000	ENSMZEG00005014594	-	91	87.062	Maylandia_zebra
ENSMZEG00005006498	-	93	72.973	ENSMGAG00000005472	LARP4B	83	72.973	Meleagris_gallopavo
ENSMZEG00005006498	-	93	75.862	ENSMAUG00000021657	Larp4b	84	75.862	Mesocricetus_auratus
ENSMZEG00005006498	-	96	62.842	ENSMICG00000001301	LARP4B	84	61.750	Microcebus_murinus
ENSMZEG00005006498	-	100	59.328	ENSMOCG00000021452	Larp4b	86	61.630	Microtus_ochrogaster
ENSMZEG00005006498	-	100	80.355	ENSMMOG00000011253	-	100	80.650	Mola_mola
ENSMZEG00005006498	-	96	63.847	ENSMODG00000005957	LARP4B	100	56.101	Monodelphis_domestica
ENSMZEG00005006498	-	89	83.068	ENSMALG00000012432	LARP4B	100	69.809	Monopterus_albus
ENSMZEG00005006498	-	96	61.477	MGP_CAROLIEiJ_G0018216	Larp4b	100	52.029	Mus_caroli
ENSMZEG00005006498	-	96	61.440	ENSMUSG00000033499	Larp4b	78	73.893	Mus_musculus
ENSMZEG00005006498	-	96	61.254	MGP_PahariEiJ_G0019266	Larp4b	86	62.222	Mus_pahari
ENSMZEG00005006498	-	96	61.440	MGP_SPRETEiJ_G0019074	Larp4b	86	62.241	Mus_spretus
ENSMZEG00005006498	-	96	59.543	ENSMPUG00000016220	LARP4B	78	62.723	Mustela_putorius_furo
ENSMZEG00005006498	-	89	62.455	ENSMLUG00000005880	LARP4B	87	60.905	Myotis_lucifugus
ENSMZEG00005006498	-	93	75.862	ENSNGAG00000001750	Larp4b	85	75.862	Nannospalax_galili
ENSMZEG00005006498	-	100	89.736	ENSNBRG00000020018	LARP4B	100	89.736	Neolamprologus_brichardi
ENSMZEG00005006498	-	96	62.058	ENSNLEG00000013442	LARP4B	80	62.480	Nomascus_leucogenys
ENSMZEG00005006498	-	70	88.889	ENSMEUG00000013114	-	64	88.889	Notamacropus_eugenii
ENSMZEG00005006498	-	93	75.862	ENSOPRG00000003300	LARP4B	81	59.265	Ochotona_princeps
ENSMZEG00005006498	-	96	57.556	ENSODEG00000001109	LARP4B	86	58.803	Octodon_degus
ENSMZEG00005006498	-	98	97.525	ENSONIG00000017705	LARP4B	84	96.429	Oreochromis_niloticus
ENSMZEG00005006498	-	92	86.667	ENSOANG00000006100	LARP4B	83	86.667	Ornithorhynchus_anatinus
ENSMZEG00005006498	-	96	58.760	ENSOCUG00000004950	LARP4B	76	62.075	Oryctolagus_cuniculus
ENSMZEG00005006498	-	97	85.880	ENSORLG00000006080	LARP4B	100	69.819	Oryzias_latipes
ENSMZEG00005006498	-	97	87.684	ENSORLG00020020940	LARP4B	100	72.740	Oryzias_latipes_hni
ENSMZEG00005006498	-	97	87.638	ENSORLG00015020608	LARP4B	100	72.943	Oryzias_latipes_hsok
ENSMZEG00005006498	-	95	87.947	ENSOMEG00000019619	LARP4B	100	72.702	Oryzias_melastigma
ENSMZEG00005006498	-	91	61.005	ENSOGAG00000011540	LARP4B	86	60.225	Otolemur_garnettii
ENSMZEG00005006498	-	96	60.285	ENSOARG00000015320	LARP4B	79	61.058	Ovis_aries
ENSMZEG00005006498	-	96	62.219	ENSPPAG00000039232	LARP4B	80	62.921	Pan_paniscus
ENSMZEG00005006498	-	96	60.772	ENSPPRG00000009489	LARP4B	80	62.237	Panthera_pardus
ENSMZEG00005006498	-	96	60.772	ENSPTIG00000008543	LARP4B	80	62.237	Panthera_tigris_altaica
ENSMZEG00005006498	-	96	62.219	ENSPTRG00000002235	LARP4B	80	62.921	Pan_troglodytes
ENSMZEG00005006498	-	96	62.379	ENSPANG00000023546	LARP4B	80	60.225	Papio_anubis
ENSMZEG00005006498	-	90	88.889	ENSPKIG00000012368	LARP4B	83	88.889	Paramormyrops_kingsleyae
ENSMZEG00005006498	-	89	70.625	ENSPSIG00000005600	LARP4B	99	70.000	Pelodiscus_sinensis
ENSMZEG00005006498	-	89	75.551	ENSPMGG00000008261	LARP4B	91	62.714	Periophthalmus_magnuspinnatus
ENSMZEG00005006498	-	96	60.611	ENSPEMG00000014052	Larp4b	80	61.426	Peromyscus_maniculatus_bairdii
ENSMZEG00005006498	-	95	89.358	ENSPFOG00000000029	LARP4B	89	77.160	Poecilia_formosa
ENSMZEG00005006498	-	95	89.527	ENSPLAG00000002871	LARP4B	100	76.346	Poecilia_latipinna
ENSMZEG00005006498	-	95	90.280	ENSPMEG00000016361	LARP4B	100	72.865	Poecilia_mexicana
ENSMZEG00005006498	-	96	61.316	ENSPPYG00000002035	LARP4B	78	62.279	Pongo_abelii
ENSMZEG00005006498	-	96	61.551	ENSPCOG00000014688	LARP4B	81	62.460	Propithecus_coquereli
ENSMZEG00005006498	-	88	56.935	ENSPVAG00000009784	LARP4B	83	57.810	Pteropus_vampyrus
ENSMZEG00005006498	-	98	98.515	ENSPNYG00000024252	LARP4B	100	84.123	Pundamilia_nyererei
ENSMZEG00005006498	-	99	57.656	ENSPNAG00000028956	larp4b	83	59.272	Pygocentrus_nattereri
ENSMZEG00005006498	-	96	60.514	ENSRNOG00000015888	Larp4b	92	58.805	Rattus_norvegicus
ENSMZEG00005006498	-	96	62.219	ENSRBIG00000033294	LARP4B	80	63.023	Rhinopithecus_bieti
ENSMZEG00005006498	-	96	62.379	ENSRROG00000033879	LARP4B	80	63.023	Rhinopithecus_roxellana
ENSMZEG00005006498	-	96	54.662	ENSSBOG00000021109	LARP4B	80	56.019	Saimiri_boliviensis_boliviensis
ENSMZEG00005006498	-	96	65.282	ENSSHAG00000013392	LARP4B	100	57.047	Sarcophilus_harrisii
ENSMZEG00005006498	-	92	92.593	ENSSFOG00015003256	LARP4B	78	92.593	Scleropages_formosus
ENSMZEG00005006498	-	98	82.730	ENSSMAG00000005982	-	100	76.923	Scophthalmus_maximus
ENSMZEG00005006498	-	98	94.693	ENSSDUG00000006704	LARP4B	100	78.333	Seriola_dumerili
ENSMZEG00005006498	-	100	86.451	ENSSLDG00000020660	LARP4B	100	86.451	Seriola_lalandi_dorsalis
ENSMZEG00005006498	-	70	85.047	ENSSARG00000001243	-	79	85.047	Sorex_araneus
ENSMZEG00005006498	-	97	69.928	ENSSPUG00000002102	-	100	60.719	Sphenodon_punctatus
ENSMZEG00005006498	-	97	65.823	ENSSPUG00000013734	-	100	59.654	Sphenodon_punctatus
ENSMZEG00005006498	-	100	83.900	ENSSPAG00000014628	LARP4B	100	83.900	Stegastes_partitus
ENSMZEG00005006498	-	97	60.890	ENSSSCG00000011162	LARP4B	97	61.881	Sus_scrofa
ENSMZEG00005006498	-	92	86.667	ENSTGUG00000000811	-	86	86.667	Taeniopygia_guttata
ENSMZEG00005006498	-	95	73.223	ENSTNIG00000004571	-	98	67.323	Tetraodon_nigroviridis
ENSMZEG00005006498	-	95	79.534	ENSTNIG00000007991	LARP4B	85	80.135	Tetraodon_nigroviridis
ENSMZEG00005006498	-	79	60.886	ENSTTRG00000011151	LARP4B	64	73.464	Tursiops_truncatus
ENSMZEG00005006498	-	96	60.611	ENSUAMG00000016461	LARP4B	86	61.551	Ursus_americanus
ENSMZEG00005006498	-	96	60.450	ENSUMAG00000016127	LARP4B	80	62.561	Ursus_maritimus
ENSMZEG00005006498	-	59	86.034	ENSVPAG00000000128	-	64	86.034	Vicugna_pacos
ENSMZEG00005006498	-	96	60.450	ENSVVUG00000008641	LARP4B	92	59.048	Vulpes_vulpes
ENSMZEG00005006498	-	92	89.286	ENSXETG00000016882	larp4b	86	86.667	Xenopus_tropicalis
ENSMZEG00005006498	-	100	68.759	ENSXCOG00000019952	LARP4B	100	68.716	Xiphophorus_couchianus
ENSMZEG00005006498	-	95	89.572	ENSXMAG00000021533	LARP4B	100	72.115	Xiphophorus_maculatus