EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006581 (Gene tree)
Gene ID: 101476178
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 74156 bases
Position: chrLG1:9172087-9246242
Accession: 101476178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005008805	ResIII	PF04851.15	1.9e-06	1	1
ENSMZEP00005008745	ResIII	PF04851.15	1.9e-06	1	1
ENSMZEP00005008661	ResIII	PF04851.15	9.7e-06	1	1
ENSMZEP00005008697	ResIII	PF04851.15	9.7e-06	1	1
ENSMZEP00005008805	BRK	PF07533.16	6.4e-32	1	2
ENSMZEP00005008805	BRK	PF07533.16	6.4e-32	2	2
ENSMZEP00005008745	BRK	PF07533.16	6.6e-32	1	2
ENSMZEP00005008745	BRK	PF07533.16	6.6e-32	2	2
ENSMZEP00005008661	BRK	PF07533.16	1e-31	1	2
ENSMZEP00005008661	BRK	PF07533.16	1e-31	2	2
ENSMZEP00005008697	BRK	PF07533.16	1e-31	1	2
ENSMZEP00005008697	BRK	PF07533.16	1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009145	-	7428	-	ENSMZEP00005008805	2475 (aa)	-	-
ENSMZET00005009001	-	12412	XM_004539681	ENSMZEP00005008661	3007 (aa)	XP_004539738	UPI0003297528
ENSMZET00005009037	-	12494	XM_014413711	ENSMZEP00005008697	3007 (aa)	XP_014269197	UPI0003297528
ENSMZET00005009085	-	10459	XM_014413749	ENSMZEP00005008745	2504 (aa)	XP_014269235	UPI000329877F

Gene Model

Click here to download ENSMZEG00005006581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006581	chd9	98	68.857	ENSG00000177200	CHD9	96	70.887	Homo_sapiens
ENSMZEG00005006581	chd9	99	93.076	ENSAPOG00000023034	chd9	99	92.593	Acanthochromis_polyacanthus
ENSMZEG00005006581	chd9	67	75.895	ENSAMEG00000016232	CHD9	84	71.596	Ailuropoda_melanoleuca
ENSMZEG00005006581	chd9	97	90.511	ENSACIG00000004097	chd9	98	87.053	Amphilophus_citrinellus
ENSMZEG00005006581	chd9	99	93.495	ENSAOCG00000005487	chd9	99	92.754	Amphiprion_ocellaris
ENSMZEG00005006581	chd9	99	93.455	ENSAPEG00000009859	chd9	99	92.713	Amphiprion_percula
ENSMZEG00005006581	chd9	99	91.313	ENSATEG00000002748	chd9	99	86.048	Anabas_testudineus
ENSMZEG00005006581	chd9	98	69.476	ENSAPLG00000002826	CHD9	79	71.927	Anas_platyrhynchos
ENSMZEG00005006581	chd9	68	75.543	ENSACAG00000016150	CHD9	84	70.134	Anolis_carolinensis
ENSMZEG00005006581	chd9	97	69.162	ENSANAG00000015630	CHD9	92	69.474	Aotus_nancymaae
ENSMZEG00005006581	chd9	99	96.628	ENSACLG00000016899	chd9	100	93.922	Astatotilapia_calliptera
ENSMZEG00005006581	chd9	99	76.475	ENSAMXG00000005652	chd9	99	76.170	Astyanax_mexicanus
ENSMZEG00005006581	chd9	99	61.011	ENSBTAG00000002287	CHD9	84	70.610	Bos_taurus
ENSMZEG00005006581	chd9	98	68.722	ENSCJAG00000001573	CHD9	92	69.825	Callithrix_jacchus
ENSMZEG00005006581	chd9	67	75.716	ENSCAFG00000009699	CHD9	84	71.584	Canis_familiaris
ENSMZEG00005006581	chd9	67	75.716	ENSCAFG00020002879	CHD9	91	70.526	Canis_lupus_dingo
ENSMZEG00005006581	chd9	97	67.552	ENSCHIG00000021000	CHD9	56	75.136	Capra_hircus
ENSMZEG00005006581	chd9	67	75.433	ENSTSYG00000007693	CHD9	91	70.526	Carlito_syrichta
ENSMZEG00005006581	chd9	78	60.410	ENSCAPG00000011604	CHD9	64	61.441	Cavia_aperea
ENSMZEG00005006581	chd9	67	71.130	ENSCPOG00000036544	CHD9	84	67.394	Cavia_porcellus
ENSMZEG00005006581	chd9	67	75.598	ENSCCAG00000036178	CHD9	92	70.423	Cebus_capucinus
ENSMZEG00005006581	chd9	67	75.792	ENSCATG00000036753	CHD9	92	69.896	Cercocebus_atys
ENSMZEG00005006581	chd9	67	75.553	ENSCLAG00000007137	CHD9	99	77.373	Chinchilla_lanigera
ENSMZEG00005006581	chd9	67	75.732	ENSCSAG00000005311	CHD9	84	71.010	Chlorocebus_sabaeus
ENSMZEG00005006581	chd9	70	91.406	ENSCHOG00000003935	CHD9	55	91.361	Choloepus_hoffmanni
ENSMZEG00005006581	chd9	94	83.060	ENSCPBG00000012459	CHD9	85	78.707	Chrysemys_picta_bellii
ENSMZEG00005006581	chd9	99	61.290	ENSCANG00000030349	CHD9	92	70.526	Colobus_angolensis_palliatus
ENSMZEG00005006581	chd9	97	68.536	ENSCGRG00001016150	Chd9	79	70.405	Cricetulus_griseus_chok1gshd
ENSMZEG00005006581	chd9	97	68.536	ENSCGRG00000012850	Chd9	99	77.544	Cricetulus_griseus_crigri
ENSMZEG00005006581	chd9	99	86.149	ENSCSEG00000009209	chd9	99	84.762	Cynoglossus_semilaevis
ENSMZEG00005006581	chd9	94	88.481	ENSCVAG00000016195	chd9	99	79.893	Cyprinodon_variegatus
ENSMZEG00005006581	chd9	99	76.105	ENSDARG00000074498	chd9	99	75.965	Danio_rerio
ENSMZEG00005006581	chd9	94	69.921	ENSDNOG00000006045	CHD9	94	71.797	Dasypus_novemcinctus
ENSMZEG00005006581	chd9	51	78.288	ENSDORG00000008523	-	96	70.629	Dipodomys_ordii
ENSMZEG00005006581	chd9	64	91.270	ENSETEG00000009565	CHD9	76	91.270	Echinops_telfairi
ENSMZEG00005006581	chd9	94	72.971	ENSEASG00005014832	CHD9	96	78.261	Equus_asinus_asinus
ENSMZEG00005006581	chd9	67	75.597	ENSECAG00000011505	CHD9	84	71.345	Equus_caballus
ENSMZEG00005006581	chd9	80	85.652	ENSEEUG00000014515	CHD9	70	85.652	Erinaceus_europaeus
ENSMZEG00005006581	chd9	97	79.398	ENSELUG00000006031	chd9	99	78.583	Esox_lucius
ENSMZEG00005006581	chd9	97	69.262	ENSFCAG00000022534	CHD9	91	70.877	Felis_catus
ENSMZEG00005006581	chd9	99	69.234	ENSFALG00000013276	CHD9	97	70.747	Ficedula_albicollis
ENSMZEG00005006581	chd9	67	75.687	ENSFDAG00000021037	CHD9	84	70.828	Fukomys_damarensis
ENSMZEG00005006581	chd9	99	87.650	ENSFHEG00000006068	chd9	99	87.209	Fundulus_heteroclitus
ENSMZEG00005006581	chd9	80	87.024	ENSGMOG00000006040	chd9	83	86.957	Gadus_morhua
ENSMZEG00005006581	chd9	93	71.652	ENSGALG00000039178	CHD9	85	72.322	Gallus_gallus
ENSMZEG00005006581	chd9	99	88.358	ENSGAFG00000010014	chd9	99	88.599	Gambusia_affinis
ENSMZEG00005006581	chd9	96	85.549	ENSGACG00000016694	chd9	69	90.776	Gasterosteus_aculeatus
ENSMZEG00005006581	chd9	67	75.672	ENSGGOG00000014816	CHD9	92	70.175	Gorilla_gorilla
ENSMZEG00005006581	chd9	100	98.671	ENSHBUG00000023322	chd9	100	98.671	Haplochromis_burtoni
ENSMZEG00005006581	chd9	97	69.299	ENSHGLG00000014938	CHD9	96	80.737	Heterocephalus_glaber_female
ENSMZEG00005006581	chd9	96	83.599	ENSHCOG00000000937	chd9	97	84.029	Hippocampus_comes
ENSMZEG00005006581	chd9	99	78.133	ENSIPUG00000016448	chd9	97	81.818	Ictalurus_punctatus
ENSMZEG00005006581	chd9	97	69.353	ENSSTOG00000022273	CHD9	99	77.455	Ictidomys_tridecemlineatus
ENSMZEG00005006581	chd9	81	69.145	ENSJJAG00000015741	-	96	70.683	Jaculus_jaculus
ENSMZEG00005006581	chd9	96	89.996	ENSKMAG00000016784	chd9	99	88.679	Kryptolebias_marmoratus
ENSMZEG00005006581	chd9	99	89.041	ENSLBEG00000012077	chd9	99	88.956	Labrus_bergylta
ENSMZEG00005006581	chd9	97	65.212	ENSLACG00000005557	CHD9	79	66.792	Latimeria_chalumnae
ENSMZEG00005006581	chd9	98	75.519	ENSLOCG00000007225	chd9	97	76.728	Lepisosteus_oculatus
ENSMZEG00005006581	chd9	67	75.074	ENSLAFG00000015374	CHD9	84	70.401	Loxodonta_africana
ENSMZEG00005006581	chd9	93	70.455	ENSMFAG00000041354	CHD9	93	71.429	Macaca_fascicularis
ENSMZEG00005006581	chd9	67	75.792	ENSMMUG00000016310	CHD9	92	70.526	Macaca_mulatta
ENSMZEG00005006581	chd9	99	61.263	ENSMNEG00000031494	CHD9	85	72.829	Macaca_nemestrina
ENSMZEG00005006581	chd9	67	75.792	ENSMLEG00000043219	CHD9	92	70.526	Mandrillus_leucophaeus
ENSMZEG00005006581	chd9	99	91.313	ENSMAMG00000003909	chd9	99	86.358	Mastacembelus_armatus
ENSMZEG00005006581	chd9	98	65.014	ENSMGAG00000004642	CHD9	59	72.958	Meleagris_gallopavo
ENSMZEG00005006581	chd9	67	75.672	ENSMICG00000016679	CHD9	91	70.877	Microcebus_murinus
ENSMZEG00005006581	chd9	97	85.697	ENSMMOG00000016406	chd9	99	79.667	Mola_mola
ENSMZEG00005006581	chd9	85	75.895	ENSMODG00000013142	-	95	78.047	Monodelphis_domestica
ENSMZEG00005006581	chd9	98	88.195	ENSMALG00000013306	chd9	99	81.770	Monopterus_albus
ENSMZEG00005006581	chd9	67	74.554	MGP_CAROLIEiJ_G0031364	Chd9	79	70.721	Mus_caroli
ENSMZEG00005006581	chd9	67	74.539	ENSMUSG00000056608	Chd9	99	76.523	Mus_musculus
ENSMZEG00005006581	chd9	94	62.522	MGP_PahariEiJ_G0022964	Chd9	84	69.031	Mus_pahari
ENSMZEG00005006581	chd9	67	74.242	MGP_SPRETEiJ_G0032483	Chd9	79	70.366	Mus_spretus
ENSMZEG00005006581	chd9	67	75.895	ENSMPUG00000003285	CHD9	85	70.525	Mustela_putorius_furo
ENSMZEG00005006581	chd9	67	75.194	ENSMLUG00000004456	CHD9	84	70.403	Myotis_lucifugus
ENSMZEG00005006581	chd9	100	98.922	ENSNBRG00000009423	chd9	100	98.922	Neolamprologus_brichardi
ENSMZEG00005006581	chd9	85	71.861	ENSNLEG00000001026	CHD9	85	72.892	Nomascus_leucogenys
ENSMZEG00005006581	chd9	72	94.737	ENSMEUG00000008222	-	74	88.750	Notamacropus_eugenii
ENSMZEG00005006581	chd9	55	94.737	ENSOPRG00000011168	CHD9	72	85.754	Ochotona_princeps
ENSMZEG00005006581	chd9	67	75.343	ENSODEG00000004466	CHD9	84	70.748	Octodon_degus
ENSMZEG00005006581	chd9	99	96.400	ENSONIG00000002816	chd9	99	97.851	Oreochromis_niloticus
ENSMZEG00005006581	chd9	67	76.380	ENSOANG00000013401	CHD9	84	71.879	Ornithorhynchus_anatinus
ENSMZEG00005006581	chd9	68	74.751	ENSOCUG00000001016	CHD9	96	69.751	Oryctolagus_cuniculus
ENSMZEG00005006581	chd9	96	88.449	ENSORLG00000013810	chd9	97	86.806	Oryzias_latipes
ENSMZEG00005006581	chd9	97	84.434	ENSORLG00020020665	chd9	98	76.975	Oryzias_latipes_hni
ENSMZEG00005006581	chd9	98	87.859	ENSORLG00015019126	chd9	97	87.662	Oryzias_latipes_hsok
ENSMZEG00005006581	chd9	55	91.301	ENSOMEG00000015978	chd9	99	79.679	Oryzias_melastigma
ENSMZEG00005006581	chd9	97	69.119	ENSOGAG00000002110	CHD9	79	70.954	Otolemur_garnettii
ENSMZEG00005006581	chd9	99	60.885	ENSOARG00000017664	CHD9	84	70.502	Ovis_aries
ENSMZEG00005006581	chd9	97	68.459	ENSPPAG00000039388	-	96	70.453	Pan_paniscus
ENSMZEG00005006581	chd9	97	69.302	ENSPPRG00000004801	CHD9	91	70.526	Panthera_pardus
ENSMZEG00005006581	chd9	97	68.213	ENSPTIG00000021854	CHD9	84	70.159	Panthera_tigris_altaica
ENSMZEG00005006581	chd9	99	61.290	ENSPTRG00000008113	CHD9	92	70.175	Pan_troglodytes
ENSMZEG00005006581	chd9	98	68.643	ENSPANG00000019307	CHD9	96	70.708	Papio_anubis
ENSMZEG00005006581	chd9	95	77.699	ENSPKIG00000021876	chd9	96	78.504	Paramormyrops_kingsleyae
ENSMZEG00005006581	chd9	97	71.663	ENSPKIG00000025401	-	89	67.250	Paramormyrops_kingsleyae
ENSMZEG00005006581	chd9	56	77.570	ENSPSIG00000008099	CHD9	78	78.882	Pelodiscus_sinensis
ENSMZEG00005006581	chd9	60	69.671	ENSPMAG00000006035	-	86	69.671	Petromyzon_marinus
ENSMZEG00005006581	chd9	86	71.595	ENSPCIG00000017215	CHD9	99	71.595	Phascolarctos_cinereus
ENSMZEG00005006581	chd9	99	88.356	ENSPFOG00000015839	chd9	99	84.000	Poecilia_formosa
ENSMZEG00005006581	chd9	99	88.519	ENSPLAG00000011118	chd9	99	88.960	Poecilia_latipinna
ENSMZEG00005006581	chd9	99	85.939	ENSPMEG00000015106	chd9	99	81.554	Poecilia_mexicana
ENSMZEG00005006581	chd9	97	89.793	ENSPREG00000006473	chd9	99	88.474	Poecilia_reticulata
ENSMZEG00005006581	chd9	99	61.250	ENSPPYG00000007348	CHD9	85	70.762	Pongo_abelii
ENSMZEG00005006581	chd9	73	80.255	ENSPCAG00000007564	CHD9	74	82.176	Procavia_capensis
ENSMZEG00005006581	chd9	67	73.282	ENSPCOG00000028433	CHD9	91	69.825	Propithecus_coquereli
ENSMZEG00005006581	chd9	79	72.967	ENSPVAG00000015617	CHD9	81	74.385	Pteropus_vampyrus
ENSMZEG00005006581	chd9	100	99.840	ENSPNYG00000010947	chd9	100	99.840	Pundamilia_nyererei
ENSMZEG00005006581	chd9	99	77.892	ENSPNAG00000024141	chd9	99	77.514	Pygocentrus_nattereri
ENSMZEG00005006581	chd9	67	72.031	ENSRNOG00000049302	Chd9	93	58.290	Rattus_norvegicus
ENSMZEG00005006581	chd9	97	69.197	ENSRBIG00000035553	CHD9	96	70.745	Rhinopithecus_bieti
ENSMZEG00005006581	chd9	96	69.980	ENSRROG00000033278	CHD9	97	70.804	Rhinopithecus_roxellana
ENSMZEG00005006581	chd9	97	69.243	ENSSBOG00000030240	CHD9	92	69.825	Saimiri_boliviensis_boliviensis
ENSMZEG00005006581	chd9	97	69.348	ENSSHAG00000002719	CHD9	79	71.159	Sarcophilus_harrisii
ENSMZEG00005006581	chd9	99	73.729	ENSSFOG00015001327	chd9	96	75.073	Scleropages_formosus
ENSMZEG00005006581	chd9	96	78.044	ENSSFOG00015020209	chd9	99	76.710	Scleropages_formosus
ENSMZEG00005006581	chd9	97	91.584	ENSSMAG00000008953	chd9	99	90.587	Scophthalmus_maximus
ENSMZEG00005006581	chd9	99	92.196	ENSSDUG00000006139	chd9	99	91.995	Seriola_dumerili
ENSMZEG00005006581	chd9	99	92.762	ENSSLDG00000017818	chd9	99	92.561	Seriola_lalandi_dorsalis
ENSMZEG00005006581	chd9	99	93.481	ENSSPAG00000021649	chd9	99	93.038	Stegastes_partitus
ENSMZEG00005006581	chd9	97	68.816	ENSSSCG00000033591	CHD9	57	76.396	Sus_scrofa
ENSMZEG00005006581	chd9	86	72.768	ENSTGUG00000007476	CHD9	86	73.804	Taeniopygia_guttata
ENSMZEG00005006581	chd9	99	85.380	ENSTRUG00000009125	chd9	99	79.813	Takifugu_rubripes
ENSMZEG00005006581	chd9	67	87.081	ENSTNIG00000003825	chd9	85	99.408	Tetraodon_nigroviridis
ENSMZEG00005006581	chd9	61	93.220	ENSTBEG00000016052	-	66	93.220	Tupaia_belangeri
ENSMZEG00005006581	chd9	83	75.179	ENSTTRG00000012674	CHD9	77	71.715	Tursiops_truncatus
ENSMZEG00005006581	chd9	78	86.373	ENSUMAG00000004043	CHD9	96	86.102	Ursus_maritimus
ENSMZEG00005006581	chd9	70	75.833	ENSVPAG00000001374	CHD9	81	69.883	Vicugna_pacos
ENSMZEG00005006581	chd9	67	75.656	ENSVVUG00000019435	CHD9	84	71.542	Vulpes_vulpes
ENSMZEG00005006581	chd9	96	67.525	ENSXETG00000000349	chd9	78	75.791	Xenopus_tropicalis
ENSMZEG00005006581	chd9	99	87.671	ENSXCOG00000012997	chd9	99	88.034	Xiphophorus_couchianus
ENSMZEG00005006581	chd9	99	89.085	ENSXMAG00000016192	chd9	99	89.286	Xiphophorus_maculatus