EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006638 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6839 bases
Position: chrLG2:16652964-16659802
Accession: 101480611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005008723	RNA_pol_L_2	PF13656.6	3.5e-29	1	1
ENSMZEP00005008723	RNA_pol_L	PF01193.24	9.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009063	-	342	XM_004563229	ENSMZEP00005008723	113 (aa)	XP_004563286	-

Gene Model

Click here to download ENSMZEG00005006638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006638	polr1d	90	74.510	ENSG00000186184	POLR1D	88	74.510	Homo_sapiens
ENSMZEG00005006638	polr1d	91	90.291	ENSAPOG00000021882	polr1d	97	90.291	Acanthochromis_polyacanthus
ENSMZEG00005006638	polr1d	88	75.000	ENSAMEG00000019095	POLR1D	80	75.000	Ailuropoda_melanoleuca
ENSMZEG00005006638	polr1d	92	91.346	ENSACIG00000013328	polr1d	90	91.346	Amphilophus_citrinellus
ENSMZEG00005006638	polr1d	90	88.235	ENSAOCG00000018500	polr1d	89	88.235	Amphiprion_ocellaris
ENSMZEG00005006638	polr1d	91	89.320	ENSAPEG00000009489	polr1d	90	89.320	Amphiprion_percula
ENSMZEG00005006638	polr1d	96	85.185	ENSATEG00000019322	polr1d	96	85.185	Anabas_testudineus
ENSMZEG00005006638	polr1d	88	70.707	ENSACAG00000015753	POLR1D	85	70.707	Anolis_carolinensis
ENSMZEG00005006638	polr1d	88	75.000	ENSANAG00000024486	POLR1D	75	75.000	Aotus_nancymaae
ENSMZEG00005006638	polr1d	100	100.000	ENSACLG00000023805	polr1d	100	100.000	Astatotilapia_calliptera
ENSMZEG00005006638	polr1d	87	79.592	ENSAMXG00000036118	polr1d	88	77.228	Astyanax_mexicanus
ENSMZEG00005006638	polr1d	88	73.000	ENSBTAG00000033252	-	75	73.000	Bos_taurus
ENSMZEG00005006638	polr1d	88	73.000	ENSBTAG00000008642	POLR1D	75	73.000	Bos_taurus
ENSMZEG00005006638	polr1d	73	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSMZEG00005006638	polr1d	88	75.000	ENSCJAG00000044669	POLR1D	75	75.000	Callithrix_jacchus
ENSMZEG00005006638	polr1d	88	75.000	ENSCAFG00000006755	POLR1D	75	75.000	Canis_familiaris
ENSMZEG00005006638	polr1d	88	74.000	ENSCHIG00000021910	POLR1D	75	74.000	Capra_hircus
ENSMZEG00005006638	polr1d	91	64.762	ENSTSYG00000034852	-	87	64.762	Carlito_syrichta
ENSMZEG00005006638	polr1d	89	75.248	ENSTSYG00000026817	-	76	75.248	Carlito_syrichta
ENSMZEG00005006638	polr1d	58	62.121	ENSCAPG00000006058	-	67	62.121	Cavia_aperea
ENSMZEG00005006638	polr1d	54	65.574	ENSCPOG00000030450	-	62	65.574	Cavia_porcellus
ENSMZEG00005006638	polr1d	88	76.000	ENSCCAG00000021349	-	75	76.000	Cebus_capucinus
ENSMZEG00005006638	polr1d	88	57.000	ENSCCAG00000020191	-	72	57.000	Cebus_capucinus
ENSMZEG00005006638	polr1d	89	64.356	ENSCATG00000022900	-	75	64.356	Cercocebus_atys
ENSMZEG00005006638	polr1d	90	74.510	ENSCATG00000030710	-	77	74.510	Cercocebus_atys
ENSMZEG00005006638	polr1d	90	73.529	ENSCLAG00000017623	POLR1D	82	73.529	Chinchilla_lanigera
ENSMZEG00005006638	polr1d	88	81.000	ENSCPBG00000004719	POLR1D	99	81.000	Chrysemys_picta_bellii
ENSMZEG00005006638	polr1d	89	74.257	ENSCANG00000037694	-	76	74.257	Colobus_angolensis_palliatus
ENSMZEG00005006638	polr1d	90	74.510	ENSCANG00000028632	-	77	74.510	Colobus_angolensis_palliatus
ENSMZEG00005006638	polr1d	90	73.529	ENSCGRG00001021251	Polr1d	77	73.529	Cricetulus_griseus_chok1gshd
ENSMZEG00005006638	polr1d	90	73.529	ENSCGRG00000011639	Polr1d	77	73.529	Cricetulus_griseus_crigri
ENSMZEG00005006638	polr1d	90	87.255	ENSCSEG00000018268	polr1d	87	87.255	Cynoglossus_semilaevis
ENSMZEG00005006638	polr1d	92	83.654	ENSCVAG00000018527	polr1d	91	83.654	Cyprinodon_variegatus
ENSMZEG00005006638	polr1d	90	77.451	ENSDARG00000037570	polr1d	90	77.451	Danio_rerio
ENSMZEG00005006638	polr1d	90	73.529	ENSDNOG00000043676	-	77	73.529	Dasypus_novemcinctus
ENSMZEG00005006638	polr1d	90	72.549	ENSDNOG00000046247	-	76	72.549	Dasypus_novemcinctus
ENSMZEG00005006638	polr1d	90	73.529	ENSDORG00000029155	Polr1d	77	73.529	Dipodomys_ordii
ENSMZEG00005006638	polr1d	85	43.750	FBgn0086447	l(2)37Cg	90	43.750	Drosophila_melanogaster
ENSMZEG00005006638	polr1d	90	73.529	ENSETEG00000012797	POLR1D	82	73.529	Echinops_telfairi
ENSMZEG00005006638	polr1d	76	69.767	ENSEBUG00000011748	polr1d	60	69.767	Eptatretus_burgeri
ENSMZEG00005006638	polr1d	88	75.000	ENSEASG00005022487	POLR1D	78	75.000	Equus_asinus_asinus
ENSMZEG00005006638	polr1d	95	71.028	ENSEEUG00000013144	POLR1D	86	71.028	Erinaceus_europaeus
ENSMZEG00005006638	polr1d	88	85.000	ENSELUG00000005105	rpac2	88	85.000	Esox_lucius
ENSMZEG00005006638	polr1d	88	75.000	ENSFCAG00000030162	POLR1D	75	75.000	Felis_catus
ENSMZEG00005006638	polr1d	79	80.899	ENSFALG00000011463	POLR1D	88	80.899	Ficedula_albicollis
ENSMZEG00005006638	polr1d	90	72.549	ENSFDAG00000004463	POLR1D	77	72.549	Fukomys_damarensis
ENSMZEG00005006638	polr1d	90	86.275	ENSFHEG00000015410	polr1d	89	86.275	Fundulus_heteroclitus
ENSMZEG00005006638	polr1d	50	75.439	ENSGALG00000007470	POLR1D	56	75.439	Gallus_gallus
ENSMZEG00005006638	polr1d	92	84.615	ENSGAFG00000001693	polr1d	91	84.615	Gambusia_affinis
ENSMZEG00005006638	polr1d	100	83.186	ENSGACG00000018585	polr1d	96	83.186	Gasterosteus_aculeatus
ENSMZEG00005006638	polr1d	90	81.373	ENSGAGG00000008503	POLR1D	89	81.373	Gopherus_agassizii
ENSMZEG00005006638	polr1d	90	74.510	ENSGGOG00000004235	POLR1D	77	74.510	Gorilla_gorilla
ENSMZEG00005006638	polr1d	88	100.000	ENSHBUG00000002111	polr1d	89	97.059	Haplochromis_burtoni
ENSMZEG00005006638	polr1d	90	72.549	ENSHGLG00000003202	POLR1D	77	72.549	Heterocephalus_glaber_female
ENSMZEG00005006638	polr1d	90	72.549	ENSHGLG00100009393	POLR1D	77	72.549	Heterocephalus_glaber_male
ENSMZEG00005006638	polr1d	92	80.769	ENSHCOG00000003258	polr1d	91	80.769	Hippocampus_comes
ENSMZEG00005006638	polr1d	92	80.952	ENSIPUG00000014810	polr1d	91	80.952	Ictalurus_punctatus
ENSMZEG00005006638	polr1d	90	74.510	ENSSTOG00000013877	POLR1D	77	74.510	Ictidomys_tridecemlineatus
ENSMZEG00005006638	polr1d	90	72.549	ENSJJAG00000022671	-	85	72.549	Jaculus_jaculus
ENSMZEG00005006638	polr1d	90	56.863	ENSJJAG00000021667	-	59	56.863	Jaculus_jaculus
ENSMZEG00005006638	polr1d	90	83.333	ENSKMAG00000015256	polr1d	89	83.333	Kryptolebias_marmoratus
ENSMZEG00005006638	polr1d	90	90.196	ENSLBEG00000015919	polr1d	89	90.196	Labrus_bergylta
ENSMZEG00005006638	polr1d	88	71.000	ENSLACG00000006810	POLR1D	83	71.000	Latimeria_chalumnae
ENSMZEG00005006638	polr1d	63	81.690	ENSLOCG00000014976	polr1d	96	81.690	Lepisosteus_oculatus
ENSMZEG00005006638	polr1d	90	74.510	ENSLAFG00000032290	POLR1D	77	74.510	Loxodonta_africana
ENSMZEG00005006638	polr1d	90	74.510	ENSMFAG00000045264	POLR1D	79	74.510	Macaca_fascicularis
ENSMZEG00005006638	polr1d	90	74.510	ENSMMUG00000020386	POLR1D	88	74.510	Macaca_mulatta
ENSMZEG00005006638	polr1d	67	71.053	ENSMMUG00000041570	-	68	71.053	Macaca_mulatta
ENSMZEG00005006638	polr1d	89	59.406	ENSMNEG00000038120	-	73	59.406	Macaca_nemestrina
ENSMZEG00005006638	polr1d	90	74.510	ENSMNEG00000008630	-	77	74.510	Macaca_nemestrina
ENSMZEG00005006638	polr1d	90	74.510	ENSMLEG00000041048	-	77	74.510	Mandrillus_leucophaeus
ENSMZEG00005006638	polr1d	89	65.347	ENSMLEG00000032251	-	75	65.347	Mandrillus_leucophaeus
ENSMZEG00005006638	polr1d	90	94.118	ENSMAMG00000014834	polr1d	95	94.118	Mastacembelus_armatus
ENSMZEG00005006638	polr1d	81	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSMZEG00005006638	polr1d	90	73.529	ENSMAUG00000001946	Polr1d	77	73.529	Mesocricetus_auratus
ENSMZEG00005006638	polr1d	90	73.529	ENSMICG00000016883	-	77	73.529	Microcebus_murinus
ENSMZEG00005006638	polr1d	90	58.824	ENSMICG00000007349	-	76	58.824	Microcebus_murinus
ENSMZEG00005006638	polr1d	90	72.549	ENSMOCG00000021288	Polr1d	77	72.549	Microtus_ochrogaster
ENSMZEG00005006638	polr1d	90	89.216	ENSMMOG00000009605	polr1d	89	89.216	Mola_mola
ENSMZEG00005006638	polr1d	90	78.431	ENSMODG00000023881	POLR1D	89	78.431	Monodelphis_domestica
ENSMZEG00005006638	polr1d	90	87.255	ENSMALG00000010652	polr1d	89	87.255	Monopterus_albus
ENSMZEG00005006638	polr1d	90	71.569	MGP_CAROLIEiJ_G0028034	Polr1d	77	71.569	Mus_caroli
ENSMZEG00005006638	polr1d	90	71.569	ENSMUSG00000029642	Polr1d	77	71.569	Mus_musculus
ENSMZEG00005006638	polr1d	90	71.569	MGP_PahariEiJ_G0024600	Polr1d	77	71.569	Mus_pahari
ENSMZEG00005006638	polr1d	90	72.549	MGP_SPRETEiJ_G0029032	Polr1d	77	72.549	Mus_spretus
ENSMZEG00005006638	polr1d	88	70.000	ENSMLUG00000004118	-	75	70.000	Myotis_lucifugus
ENSMZEG00005006638	polr1d	86	76.289	ENSMLUG00000027169	-	73	76.289	Myotis_lucifugus
ENSMZEG00005006638	polr1d	88	74.000	ENSNGAG00000006014	Polr1d	86	74.000	Nannospalax_galili
ENSMZEG00005006638	polr1d	90	97.059	ENSNBRG00000020327	polr1d	89	97.059	Neolamprologus_brichardi
ENSMZEG00005006638	polr1d	90	74.510	ENSNLEG00000000358	POLR1D	77	74.510	Nomascus_leucogenys
ENSMZEG00005006638	polr1d	95	71.028	ENSODEG00000005294	-	80	71.028	Octodon_degus
ENSMZEG00005006638	polr1d	95	59.813	ENSODEG00000014801	-	78	59.813	Octodon_degus
ENSMZEG00005006638	polr1d	90	80.392	ENSOANG00000008708	-	94	80.392	Ornithorhynchus_anatinus
ENSMZEG00005006638	polr1d	88	75.000	ENSOCUG00000015706	POLR1D	61	75.000	Oryctolagus_cuniculus
ENSMZEG00005006638	polr1d	89	83.168	ENSORLG00000010257	polr1d	89	81.373	Oryzias_latipes
ENSMZEG00005006638	polr1d	91	82.524	ENSORLG00020000533	polr1d	69	81.373	Oryzias_latipes_hni
ENSMZEG00005006638	polr1d	91	83.495	ENSORLG00015013267	polr1d	68	82.353	Oryzias_latipes_hsok
ENSMZEG00005006638	polr1d	90	82.353	ENSOMEG00000014912	polr1d	68	82.353	Oryzias_melastigma
ENSMZEG00005006638	polr1d	90	75.490	ENSOGAG00000014601	POLR1D	77	75.490	Otolemur_garnettii
ENSMZEG00005006638	polr1d	88	74.000	ENSOARG00000017005	POLR1D	77	74.000	Ovis_aries
ENSMZEG00005006638	polr1d	90	74.510	ENSPPAG00000028138	POLR1D	77	74.510	Pan_paniscus
ENSMZEG00005006638	polr1d	88	75.000	ENSPPRG00000003381	POLR1D	75	75.000	Panthera_pardus
ENSMZEG00005006638	polr1d	88	75.000	ENSPTIG00000018137	POLR1D	75	75.000	Panthera_tigris_altaica
ENSMZEG00005006638	polr1d	90	74.510	ENSPTRG00000005734	POLR1D	77	74.510	Pan_troglodytes
ENSMZEG00005006638	polr1d	90	74.510	ENSPANG00000020259	-	77	74.510	Papio_anubis
ENSMZEG00005006638	polr1d	89	64.356	ENSPANG00000035051	-	75	64.356	Papio_anubis
ENSMZEG00005006638	polr1d	81	80.220	ENSPKIG00000021891	polr1d	93	59.829	Paramormyrops_kingsleyae
ENSMZEG00005006638	polr1d	90	75.490	ENSPSIG00000011822	POLR1D	79	75.490	Pelodiscus_sinensis
ENSMZEG00005006638	polr1d	88	71.000	ENSPMGG00000012998	POLR1D	72	71.000	Periophthalmus_magnuspinnatus
ENSMZEG00005006638	polr1d	90	79.412	ENSPMGG00000010359	polr1d	89	79.412	Periophthalmus_magnuspinnatus
ENSMZEG00005006638	polr1d	90	73.529	ENSPEMG00000006336	-	78	73.529	Peromyscus_maniculatus_bairdii
ENSMZEG00005006638	polr1d	85	62.500	ENSPMAG00000004228	polr1d	81	62.500	Petromyzon_marinus
ENSMZEG00005006638	polr1d	90	78.431	ENSPCIG00000001673	POLR1D	89	78.431	Phascolarctos_cinereus
ENSMZEG00005006638	polr1d	92	85.577	ENSPFOG00000023343	polr1d	91	85.577	Poecilia_formosa
ENSMZEG00005006638	polr1d	92	85.577	ENSPLAG00000009675	polr1d	91	85.577	Poecilia_latipinna
ENSMZEG00005006638	polr1d	92	85.577	ENSPMEG00000004628	polr1d	91	85.577	Poecilia_mexicana
ENSMZEG00005006638	polr1d	92	85.577	ENSPREG00000022032	polr1d	91	85.577	Poecilia_reticulata
ENSMZEG00005006638	polr1d	90	72.549	ENSPCOG00000028175	POLR1D	77	72.549	Propithecus_coquereli
ENSMZEG00005006638	polr1d	90	97.059	ENSPNYG00000000107	polr1d	89	97.059	Pundamilia_nyererei
ENSMZEG00005006638	polr1d	86	78.351	ENSPNAG00000001512	polr1d	90	74.766	Pygocentrus_nattereri
ENSMZEG00005006638	polr1d	90	74.510	ENSRBIG00000036378	-	77	74.510	Rhinopithecus_bieti
ENSMZEG00005006638	polr1d	89	72.277	ENSRBIG00000000336	-	76	72.277	Rhinopithecus_bieti
ENSMZEG00005006638	polr1d	90	74.510	ENSRROG00000042232	-	77	74.510	Rhinopithecus_roxellana
ENSMZEG00005006638	polr1d	89	73.267	ENSRROG00000026751	-	76	73.267	Rhinopithecus_roxellana
ENSMZEG00005006638	polr1d	76	52.326	YNL113W	RPC19	67	48.421	Saccharomyces_cerevisiae
ENSMZEG00005006638	polr1d	88	75.000	ENSSBOG00000028482	-	75	75.000	Saimiri_boliviensis_boliviensis
ENSMZEG00005006638	polr1d	88	70.707	ENSSBOG00000030146	-	73	70.707	Saimiri_boliviensis_boliviensis
ENSMZEG00005006638	polr1d	90	76.471	ENSSHAG00000001190	POLR1D	79	76.471	Sarcophilus_harrisii
ENSMZEG00005006638	polr1d	94	75.701	ENSSFOG00015011375	polr1d	94	75.701	Scleropages_formosus
ENSMZEG00005006638	polr1d	90	90.196	ENSSMAG00000011861	polr1d	89	90.196	Scophthalmus_maximus
ENSMZEG00005006638	polr1d	90	89.216	ENSSDUG00000011930	polr1d	89	89.216	Seriola_dumerili
ENSMZEG00005006638	polr1d	90	91.176	ENSSLDG00000023871	polr1d	86	91.176	Seriola_lalandi_dorsalis
ENSMZEG00005006638	polr1d	88	75.000	ENSSARG00000007840	POLR1D	75	75.000	Sorex_araneus
ENSMZEG00005006638	polr1d	82	80.645	ENSSPUG00000005786	POLR1D	85	76.768	Sphenodon_punctatus
ENSMZEG00005006638	polr1d	90	93.137	ENSSPAG00000011764	polr1d	89	93.137	Stegastes_partitus
ENSMZEG00005006638	polr1d	88	74.000	ENSSSCG00000009310	POLR1D	75	74.000	Sus_scrofa
ENSMZEG00005006638	polr1d	79	80.899	ENSTGUG00000005450	POLR1D	93	80.899	Taeniopygia_guttata
ENSMZEG00005006638	polr1d	90	81.373	ENSTRUG00000019741	polr1d	89	81.373	Takifugu_rubripes
ENSMZEG00005006638	polr1d	88	75.000	ENSTBEG00000007006	POLR1D	81	75.000	Tupaia_belangeri
ENSMZEG00005006638	polr1d	88	75.000	ENSUAMG00000011413	POLR1D	75	75.000	Ursus_americanus
ENSMZEG00005006638	polr1d	88	75.000	ENSUMAG00000016968	POLR1D	78	75.000	Ursus_maritimus
ENSMZEG00005006638	polr1d	88	75.000	ENSVVUG00000009216	POLR1D	75	75.000	Vulpes_vulpes
ENSMZEG00005006638	polr1d	88	90.000	ENSXCOG00000011731	polr1d	77	90.000	Xiphophorus_couchianus
ENSMZEG00005006638	polr1d	88	91.000	ENSXMAG00000017538	polr1d	77	91.000	Xiphophorus_maculatus