EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006828 (Gene tree)
Gene ID: 101472256
Gene Symbol: zc3h6
Alias: unm_hu7905
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 8422 bases
Position: chrLG13:20583702-20592123
Accession: 101472256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009007	zf-CCCH	PF00642.24	8.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009353	-	3946	XM_004556049	ENSMZEP00005009007	1159 (aa)	XP_004556106	UPI000329DF3D

Gene Model

Click here to download ENSMZEG00005006828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006828	zc3h6	84	48.225	ENSG00000188177	ZC3H6	61	69.271	Homo_sapiens
ENSMZEG00005006828	zc3h6	100	84.851	ENSAPOG00000002681	zc3h6	100	84.910	Acanthochromis_polyacanthus
ENSMZEG00005006828	zc3h6	98	40.272	ENSAMEG00000016194	ZC3H6	62	66.346	Ailuropoda_melanoleuca
ENSMZEG00005006828	zc3h6	76	86.878	ENSACIG00000021843	zc3h6	83	85.666	Amphilophus_citrinellus
ENSMZEG00005006828	zc3h6	100	85.251	ENSAOCG00000004039	zc3h6	100	85.337	Amphiprion_ocellaris
ENSMZEG00005006828	zc3h6	100	85.264	ENSAPEG00000014561	zc3h6	100	85.349	Amphiprion_percula
ENSMZEG00005006828	zc3h6	100	82.668	ENSATEG00000019063	zc3h6	100	82.243	Anabas_testudineus
ENSMZEG00005006828	zc3h6	98	42.296	ENSAPLG00000014287	ZC3H6	100	40.079	Anas_platyrhynchos
ENSMZEG00005006828	zc3h6	84	48.125	ENSANAG00000024229	ZC3H6	61	69.271	Aotus_nancymaae
ENSMZEG00005006828	zc3h6	100	100.000	ENSACLG00000026343	zc3h6	100	100.000	Astatotilapia_calliptera
ENSMZEG00005006828	zc3h6	84	48.125	ENSCJAG00000016479	ZC3H6	61	69.271	Callithrix_jacchus
ENSMZEG00005006828	zc3h6	84	50.426	ENSCAFG00000007160	ZC3H6	62	66.827	Canis_familiaris
ENSMZEG00005006828	zc3h6	84	47.021	ENSCAFG00020017525	ZC3H6	62	62.981	Canis_lupus_dingo
ENSMZEG00005006828	zc3h6	84	49.786	ENSTSYG00000031857	ZC3H6	60	69.792	Carlito_syrichta
ENSMZEG00005006828	zc3h6	84	48.434	ENSCATG00000036595	ZC3H6	68	69.271	Cercocebus_atys
ENSMZEG00005006828	zc3h6	73	53.086	ENSCLAG00000006605	ZC3H6	79	48.048	Chinchilla_lanigera
ENSMZEG00005006828	zc3h6	73	53.395	ENSCSAG00000016793	ZC3H6	68	69.271	Chlorocebus_sabaeus
ENSMZEG00005006828	zc3h6	83	47.009	ENSCANG00000041036	ZC3H6	61	68.750	Colobus_angolensis_palliatus
ENSMZEG00005006828	zc3h6	84	71.988	ENSCSEG00000012267	zc3h6	100	71.185	Cynoglossus_semilaevis
ENSMZEG00005006828	zc3h6	67	61.176	ENSEASG00005006493	ZC3H6	74	66.346	Equus_asinus_asinus
ENSMZEG00005006828	zc3h6	84	47.917	ENSECAG00000023620	ZC3H6	82	45.085	Equus_caballus
ENSMZEG00005006828	zc3h6	57	55.208	ENSEEUG00000013883	-	60	55.208	Erinaceus_europaeus
ENSMZEG00005006828	zc3h6	100	53.239	ENSELUG00000012256	zc3h6	100	53.949	Esox_lucius
ENSMZEG00005006828	zc3h6	84	51.304	ENSFCAG00000008089	ZC3H6	82	47.059	Felis_catus
ENSMZEG00005006828	zc3h6	97	41.022	ENSFALG00000011589	ZC3H6	99	40.257	Ficedula_albicollis
ENSMZEG00005006828	zc3h6	84	48.472	ENSFDAG00000002521	ZC3H6	61	69.271	Fukomys_damarensis
ENSMZEG00005006828	zc3h6	56	66.161	ENSGMOG00000015741	zc3h6	58	66.522	Gadus_morhua
ENSMZEG00005006828	zc3h6	99	42.701	ENSGALG00000008269	ZC3H6	100	40.859	Gallus_gallus
ENSMZEG00005006828	zc3h6	84	84.524	ENSGAFG00000006771	zc3h6	96	83.333	Gambusia_affinis
ENSMZEG00005006828	zc3h6	98	73.090	ENSGACG00000005343	zc3h6	100	72.581	Gasterosteus_aculeatus
ENSMZEG00005006828	zc3h6	99	41.331	ENSGAGG00000010857	ZC3H6	81	41.281	Gopherus_agassizii
ENSMZEG00005006828	zc3h6	84	48.225	ENSGGOG00000001665	ZC3H6	61	69.271	Gorilla_gorilla
ENSMZEG00005006828	zc3h6	100	99.827	ENSHBUG00000010088	zc3h6	100	99.827	Haplochromis_burtoni
ENSMZEG00005006828	zc3h6	97	68.559	ENSHCOG00000012519	zc3h6	98	66.521	Hippocampus_comes
ENSMZEG00005006828	zc3h6	87	40.921	ENSSTOG00000008120	-	88	41.835	Ictidomys_tridecemlineatus
ENSMZEG00005006828	zc3h6	100	78.205	ENSKMAG00000016252	zc3h6	100	78.205	Kryptolebias_marmoratus
ENSMZEG00005006828	zc3h6	72	72.963	ENSLBEG00000003054	zc3h6	81	73.396	Labrus_bergylta
ENSMZEG00005006828	zc3h6	98	40.881	ENSLACG00000012014	ZC3H6	80	41.147	Latimeria_chalumnae
ENSMZEG00005006828	zc3h6	99	50.687	ENSLOCG00000016548	zc3h6	100	48.991	Lepisosteus_oculatus
ENSMZEG00005006828	zc3h6	90	39.896	ENSLAFG00000001151	ZC3H6	66	70.312	Loxodonta_africana
ENSMZEG00005006828	zc3h6	84	48.434	ENSMFAG00000036963	ZC3H6	61	69.271	Macaca_fascicularis
ENSMZEG00005006828	zc3h6	84	48.434	ENSMMUG00000016430	ZC3H6	61	69.271	Macaca_mulatta
ENSMZEG00005006828	zc3h6	84	46.764	ENSMNEG00000031225	ZC3H6	68	69.271	Macaca_nemestrina
ENSMZEG00005006828	zc3h6	84	48.434	ENSMLEG00000038821	ZC3H6	61	69.271	Mandrillus_leucophaeus
ENSMZEG00005006828	zc3h6	100	83.333	ENSMAMG00000021546	zc3h6	100	82.838	Mastacembelus_armatus
ENSMZEG00005006828	zc3h6	98	42.030	ENSMGAG00000003025	ZC3H6	99	40.159	Meleagris_gallopavo
ENSMZEG00005006828	zc3h6	88	45.369	ENSMAUG00000017009	Zc3h6	62	64.904	Mesocricetus_auratus
ENSMZEG00005006828	zc3h6	88	45.627	ENSMOCG00000002054	Zc3h6	82	44.231	Microtus_ochrogaster
ENSMZEG00005006828	zc3h6	83	46.522	ENSMODG00000006612	ZC3H6	62	61.058	Monodelphis_domestica
ENSMZEG00005006828	zc3h6	79	74.784	ENSMALG00000002048	zc3h6	100	71.259	Monopterus_albus
ENSMZEG00005006828	zc3h6	73	55.380	ENSMPUG00000009624	ZC3H6	69	66.346	Mustela_putorius_furo
ENSMZEG00005006828	zc3h6	84	48.077	ENSMLUG00000004896	ZC3H6	62	65.385	Myotis_lucifugus
ENSMZEG00005006828	zc3h6	96	83.767	ENSNBRG00000015382	zc3h6	100	83.767	Neolamprologus_brichardi
ENSMZEG00005006828	zc3h6	89	43.446	ENSNLEG00000033657	ZC3H6	61	66.667	Nomascus_leucogenys
ENSMZEG00005006828	zc3h6	90	47.310	ENSOPRG00000012717	ZC3H6	82	46.996	Ochotona_princeps
ENSMZEG00005006828	zc3h6	99	97.762	ENSONIG00000009880	zc3h6	99	97.762	Oreochromis_niloticus
ENSMZEG00005006828	zc3h6	97	40.434	ENSOANG00000012054	-	96	40.810	Ornithorhynchus_anatinus
ENSMZEG00005006828	zc3h6	91	39.301	ENSOCUG00000011125	ZC3H6	50	39.965	Oryctolagus_cuniculus
ENSMZEG00005006828	zc3h6	100	76.455	ENSORLG00000011179	zc3h6	100	73.932	Oryzias_latipes
ENSMZEG00005006828	zc3h6	100	76.284	ENSORLG00020017202	zc3h6	100	73.846	Oryzias_latipes_hni
ENSMZEG00005006828	zc3h6	100	76.884	ENSORLG00015001664	zc3h6	100	74.444	Oryzias_latipes_hsok
ENSMZEG00005006828	zc3h6	100	75.932	ENSOMEG00000001296	zc3h6	100	76.401	Oryzias_melastigma
ENSMZEG00005006828	zc3h6	83	47.436	ENSPPAG00000030495	ZC3H6	61	69.271	Pan_paniscus
ENSMZEG00005006828	zc3h6	84	49.894	ENSPPRG00000005673	ZC3H6	82	46.623	Panthera_pardus
ENSMZEG00005006828	zc3h6	84	46.983	ENSPTIG00000015800	ZC3H6	82	43.805	Panthera_tigris_altaica
ENSMZEG00005006828	zc3h6	84	48.017	ENSPTRG00000012363	ZC3H6	61	69.271	Pan_troglodytes
ENSMZEG00005006828	zc3h6	84	48.225	ENSPANG00000025224	ZC3H6	61	69.271	Papio_anubis
ENSMZEG00005006828	zc3h6	71	80.000	ENSPKIG00000007353	zc3h6	95	80.000	Paramormyrops_kingsleyae
ENSMZEG00005006828	zc3h6	97	41.271	ENSPSIG00000002520	ZC3H6	82	41.276	Pelodiscus_sinensis
ENSMZEG00005006828	zc3h6	88	44.636	ENSPEMG00000000918	Zc3h6	63	64.423	Peromyscus_maniculatus_bairdii
ENSMZEG00005006828	zc3h6	88	41.125	ENSPCIG00000029741	ZC3H6	89	41.089	Phascolarctos_cinereus
ENSMZEG00005006828	zc3h6	97	75.109	ENSPFOG00000015748	zc3h6	99	74.500	Poecilia_formosa
ENSMZEG00005006828	zc3h6	97	74.587	ENSPLAG00000002469	zc3h6	99	73.977	Poecilia_latipinna
ENSMZEG00005006828	zc3h6	84	75.782	ENSPMEG00000020802	zc3h6	100	75.984	Poecilia_mexicana
ENSMZEG00005006828	zc3h6	79	72.384	ENSPREG00000023126	zc3h6	83	72.276	Poecilia_reticulata
ENSMZEG00005006828	zc3h6	84	50.641	ENSPCOG00000016627	ZC3H6	61	69.271	Propithecus_coquereli
ENSMZEG00005006828	zc3h6	100	84.297	ENSPNYG00000018130	zc3h6	100	84.297	Pundamilia_nyererei
ENSMZEG00005006828	zc3h6	100	55.880	ENSPNAG00000009331	zc3h6	100	54.804	Pygocentrus_nattereri
ENSMZEG00005006828	zc3h6	84	48.125	ENSSBOG00000033489	ZC3H6	67	69.271	Saimiri_boliviensis_boliviensis
ENSMZEG00005006828	zc3h6	80	41.379	ENSSHAG00000016634	ZC3H6	82	54.514	Sarcophilus_harrisii
ENSMZEG00005006828	zc3h6	100	53.135	ENSSFOG00015004488	zc3h6	100	54.146	Scleropages_formosus
ENSMZEG00005006828	zc3h6	98	79.159	ENSSMAG00000008411	zc3h6	100	76.853	Scophthalmus_maximus
ENSMZEG00005006828	zc3h6	100	84.882	ENSSDUG00000006105	zc3h6	100	85.339	Seriola_dumerili
ENSMZEG00005006828	zc3h6	100	84.856	ENSSLDG00000021813	zc3h6	100	85.229	Seriola_lalandi_dorsalis
ENSMZEG00005006828	zc3h6	84	44.568	ENSSARG00000001035	ZC3H6	61	68.750	Sorex_araneus
ENSMZEG00005006828	zc3h6	61	59.055	ENSSPUG00000013031	-	72	42.169	Sphenodon_punctatus
ENSMZEG00005006828	zc3h6	98	42.151	ENSTGUG00000007468	ZC3H6	100	39.889	Taeniopygia_guttata
ENSMZEG00005006828	zc3h6	100	77.663	ENSTRUG00000012901	zc3h6	100	77.749	Takifugu_rubripes
ENSMZEG00005006828	zc3h6	93	71.262	ENSTNIG00000016608	zc3h6	99	70.994	Tetraodon_nigroviridis
ENSMZEG00005006828	zc3h6	71	43.537	ENSTBEG00000016232	ZC3H6	57	70.642	Tupaia_belangeri
ENSMZEG00005006828	zc3h6	73	56.013	ENSUAMG00000002401	ZC3H6	69	66.827	Ursus_americanus
ENSMZEG00005006828	zc3h6	73	56.013	ENSUMAG00000008663	ZC3H6	72	66.827	Ursus_maritimus
ENSMZEG00005006828	zc3h6	83	47.265	ENSVPAG00000005912	ZC3H6	61	69.792	Vicugna_pacos
ENSMZEG00005006828	zc3h6	72	56.013	ENSVVUG00000028662	ZC3H6	69	66.827	Vulpes_vulpes
ENSMZEG00005006828	zc3h6	88	47.848	ENSXETG00000013762	zc3h6	64	66.154	Xenopus_tropicalis
ENSMZEG00005006828	zc3h6	69	100.000	ENSXCOG00000011662	zc3h6	86	92.857	Xiphophorus_couchianus
ENSMZEG00005006828	zc3h6	100	75.042	ENSXMAG00000020822	zc3h6	100	75.127	Xiphophorus_maculatus