EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006895 (Gene tree)
Gene ID: 101476514
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 7164 bases
Position: chrLG5:32321126-32328289
Accession: 101476514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009080	dsrm	PF00035.26	7.8e-35	1	2
ENSMZEP00005009080	dsrm	PF00035.26	7.8e-35	2	2
ENSMZEP00005009080	DND1_DSRM	PF14709.7	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009429	-	3607	XM_004547703	ENSMZEP00005009080	345 (aa)	XP_004547760	UPI00032A3CE7

Gene Model

Click here to download ENSMZEG00005006895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006895	tarbp2	100	64.208	ENSG00000139546	TARBP2	100	65.797	Homo_sapiens
ENSMZEG00005006895	tarbp2	100	95.362	ENSAPOG00000019892	tarbp2	100	95.362	Acanthochromis_polyacanthus
ENSMZEG00005006895	tarbp2	100	65.027	ENSAMEG00000012601	TARBP2	100	64.208	Ailuropoda_melanoleuca
ENSMZEG00005006895	tarbp2	100	97.101	ENSACIG00000016780	tarbp2	100	97.101	Amphilophus_citrinellus
ENSMZEG00005006895	tarbp2	100	95.942	ENSAOCG00000005201	tarbp2	100	95.942	Amphiprion_ocellaris
ENSMZEG00005006895	tarbp2	100	95.942	ENSAPEG00000008376	tarbp2	100	95.942	Amphiprion_percula
ENSMZEG00005006895	tarbp2	100	94.493	ENSATEG00000025012	tarbp2	100	94.493	Anabas_testudineus
ENSMZEG00005006895	tarbp2	100	66.575	ENSACAG00000001100	TARBP2	100	66.298	Anolis_carolinensis
ENSMZEG00005006895	tarbp2	100	64.481	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSMZEG00005006895	tarbp2	97	97.910	ENSACLG00000018569	tarbp2	97	97.910	Astatotilapia_calliptera
ENSMZEG00005006895	tarbp2	100	82.948	ENSAMXG00000016665	tarbp2	100	82.659	Astyanax_mexicanus
ENSMZEG00005006895	tarbp2	100	65.027	ENSBTAG00000000435	TARBP2	100	64.754	Bos_taurus
ENSMZEG00005006895	tarbp2	100	64.754	ENSCJAG00000018668	TARBP2	100	64.481	Callithrix_jacchus
ENSMZEG00005006895	tarbp2	100	67.435	ENSCAFG00000006874	TARBP2	100	67.435	Canis_familiaris
ENSMZEG00005006895	tarbp2	100	64.208	ENSCAFG00020020735	TARBP2	100	65.797	Canis_lupus_dingo
ENSMZEG00005006895	tarbp2	100	64.865	ENSCHIG00000026017	TARBP2	100	64.324	Capra_hircus
ENSMZEG00005006895	tarbp2	100	65.301	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSMZEG00005006895	tarbp2	63	70.136	ENSCAPG00000008981	TARBP2	98	70.136	Cavia_aperea
ENSMZEG00005006895	tarbp2	100	65.301	ENSCPOG00000001009	TARBP2	100	64.754	Cavia_porcellus
ENSMZEG00005006895	tarbp2	97	66.011	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSMZEG00005006895	tarbp2	100	64.481	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSMZEG00005006895	tarbp2	100	65.027	ENSCLAG00000009175	TARBP2	100	64.754	Chinchilla_lanigera
ENSMZEG00005006895	tarbp2	100	64.481	ENSCSAG00000005479	TARBP2	100	63.934	Chlorocebus_sabaeus
ENSMZEG00005006895	tarbp2	100	67.313	ENSCPBG00000000654	TARBP2	100	69.412	Chrysemys_picta_bellii
ENSMZEG00005006895	tarbp2	100	64.208	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSMZEG00005006895	tarbp2	100	64.932	ENSCGRG00001011856	TARBP2	100	64.110	Cricetulus_griseus_chok1gshd
ENSMZEG00005006895	tarbp2	100	64.932	ENSCGRG00000009088	TARBP2	100	65.021	Cricetulus_griseus_crigri
ENSMZEG00005006895	tarbp2	100	90.435	ENSCSEG00000010631	tarbp2	100	90.435	Cynoglossus_semilaevis
ENSMZEG00005006895	tarbp2	100	89.275	ENSCVAG00000009832	tarbp2	100	89.275	Cyprinodon_variegatus
ENSMZEG00005006895	tarbp2	100	81.609	ENSDARG00000070471	tarbp2	100	81.609	Danio_rerio
ENSMZEG00005006895	tarbp2	100	64.754	ENSDNOG00000002144	TARBP2	100	64.754	Dasypus_novemcinctus
ENSMZEG00005006895	tarbp2	63	70.136	ENSDORG00000001390	Tarbp2	91	70.136	Dipodomys_ordii
ENSMZEG00005006895	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	77	77.215	Echinops_telfairi
ENSMZEG00005006895	tarbp2	95	58.841	ENSEBUG00000002377	tarbp2	98	59.756	Eptatretus_burgeri
ENSMZEG00005006895	tarbp2	100	65.301	ENSEASG00005010030	TARBP2	100	65.123	Equus_asinus_asinus
ENSMZEG00005006895	tarbp2	100	67.908	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSMZEG00005006895	tarbp2	84	62.500	ENSEEUG00000001128	-	99	61.859	Erinaceus_europaeus
ENSMZEG00005006895	tarbp2	100	84.483	ENSELUG00000010642	tarbp2	100	86.782	Esox_lucius
ENSMZEG00005006895	tarbp2	100	64.754	ENSFCAG00000007757	TARBP2	100	65.123	Felis_catus
ENSMZEG00005006895	tarbp2	100	66.120	ENSFDAG00000011932	TARBP2	100	66.803	Fukomys_damarensis
ENSMZEG00005006895	tarbp2	94	89.815	ENSFHEG00000016118	tarbp2	100	89.815	Fundulus_heteroclitus
ENSMZEG00005006895	tarbp2	100	86.455	ENSGMOG00000001290	tarbp2	100	86.455	Gadus_morhua
ENSMZEG00005006895	tarbp2	65	70.852	ENSGALG00000038939	-	84	70.852	Gallus_gallus
ENSMZEG00005006895	tarbp2	100	89.275	ENSGAFG00000013341	tarbp2	100	89.275	Gambusia_affinis
ENSMZEG00005006895	tarbp2	100	88.451	ENSGACG00000006645	tarbp2	100	87.324	Gasterosteus_aculeatus
ENSMZEG00005006895	tarbp2	100	67.590	ENSGAGG00000021169	TARBP2	100	67.590	Gopherus_agassizii
ENSMZEG00005006895	tarbp2	97	65.730	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSMZEG00005006895	tarbp2	100	99.420	ENSHBUG00000018639	tarbp2	100	99.420	Haplochromis_burtoni
ENSMZEG00005006895	tarbp2	100	64.402	ENSHGLG00000001284	TARBP2	100	64.754	Heterocephalus_glaber_female
ENSMZEG00005006895	tarbp2	100	64.402	ENSHGLG00100011274	TARBP2	100	64.754	Heterocephalus_glaber_male
ENSMZEG00005006895	tarbp2	100	87.826	ENSHCOG00000001027	tarbp2	100	87.826	Hippocampus_comes
ENSMZEG00005006895	tarbp2	100	80.802	ENSIPUG00000023701	tarbp2	100	80.286	Ictalurus_punctatus
ENSMZEG00005006895	tarbp2	97	66.573	ENSSTOG00000003678	TARBP2	100	66.393	Ictidomys_tridecemlineatus
ENSMZEG00005006895	tarbp2	100	92.174	ENSKMAG00000012142	tarbp2	100	92.174	Kryptolebias_marmoratus
ENSMZEG00005006895	tarbp2	100	91.525	ENSLBEG00000015027	tarbp2	100	91.525	Labrus_bergylta
ENSMZEG00005006895	tarbp2	74	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSMZEG00005006895	tarbp2	100	79.598	ENSLOCG00000005711	tarbp2	100	79.429	Lepisosteus_oculatus
ENSMZEG00005006895	tarbp2	72	62.132	ENSLAFG00000002620	TARBP2	95	61.194	Loxodonta_africana
ENSMZEG00005006895	tarbp2	100	64.481	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSMZEG00005006895	tarbp2	100	64.754	ENSMMUG00000018492	TARBP2	100	64.208	Macaca_mulatta
ENSMZEG00005006895	tarbp2	100	64.481	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSMZEG00005006895	tarbp2	100	65.230	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSMZEG00005006895	tarbp2	95	90.826	ENSMAMG00000010272	tarbp2	97	88.304	Mastacembelus_armatus
ENSMZEG00005006895	tarbp2	100	64.384	ENSMAUG00000019805	Tarbp2	100	63.288	Mesocricetus_auratus
ENSMZEG00005006895	tarbp2	94	68.116	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSMZEG00005006895	tarbp2	100	65.205	ENSMOCG00000003691	Tarbp2	100	63.836	Microtus_ochrogaster
ENSMZEG00005006895	tarbp2	94	88.182	ENSMMOG00000010374	tarbp2	100	88.182	Mola_mola
ENSMZEG00005006895	tarbp2	100	93.623	ENSMALG00000009773	tarbp2	100	93.623	Monopterus_albus
ENSMZEG00005006895	tarbp2	100	64.384	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSMZEG00005006895	tarbp2	100	64.384	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSMZEG00005006895	tarbp2	100	64.110	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSMZEG00005006895	tarbp2	100	64.384	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSMZEG00005006895	tarbp2	100	65.479	ENSMPUG00000005944	TARBP2	100	64.384	Mustela_putorius_furo
ENSMZEG00005006895	tarbp2	100	65.847	ENSMLUG00000010035	TARBP2	100	65.668	Myotis_lucifugus
ENSMZEG00005006895	tarbp2	51	92.045	ENSNBRG00000011845	-	84	94.118	Neolamprologus_brichardi
ENSMZEG00005006895	tarbp2	100	64.208	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSMZEG00005006895	tarbp2	100	68.406	ENSMEUG00000001916	TARBP2	100	68.406	Notamacropus_eugenii
ENSMZEG00005006895	tarbp2	63	71.041	ENSOPRG00000011397	TARBP2	98	71.041	Ochotona_princeps
ENSMZEG00005006895	tarbp2	60	68.142	ENSODEG00000013413	TARBP2	100	67.699	Octodon_degus
ENSMZEG00005006895	tarbp2	95	93.678	ENSONIG00000005115	tarbp2	96	93.678	Oreochromis_niloticus
ENSMZEG00005006895	tarbp2	100	66.940	ENSOCUG00000005700	TARBP2	100	66.393	Oryctolagus_cuniculus
ENSMZEG00005006895	tarbp2	100	91.304	ENSORLG00000005209	tarbp2	100	91.304	Oryzias_latipes
ENSMZEG00005006895	tarbp2	100	91.014	ENSORLG00020017755	tarbp2	100	91.014	Oryzias_latipes_hni
ENSMZEG00005006895	tarbp2	100	91.304	ENSORLG00015013237	tarbp2	100	91.304	Oryzias_latipes_hsok
ENSMZEG00005006895	tarbp2	100	91.304	ENSOMEG00000018860	tarbp2	100	91.304	Oryzias_melastigma
ENSMZEG00005006895	tarbp2	100	64.770	ENSOGAG00000001744	TARBP2	100	65.027	Otolemur_garnettii
ENSMZEG00005006895	tarbp2	100	64.754	ENSOARG00000016437	TARBP2	100	64.481	Ovis_aries
ENSMZEG00005006895	tarbp2	100	64.208	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSMZEG00005006895	tarbp2	100	65.301	ENSPPRG00000000189	TARBP2	100	64.481	Panthera_pardus
ENSMZEG00005006895	tarbp2	100	67.039	ENSPTIG00000007859	TARBP2	100	66.667	Panthera_tigris_altaica
ENSMZEG00005006895	tarbp2	100	64.208	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSMZEG00005006895	tarbp2	100	64.481	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSMZEG00005006895	tarbp2	100	77.247	ENSPKIG00000002455	tarbp2	100	76.685	Paramormyrops_kingsleyae
ENSMZEG00005006895	tarbp2	100	90.145	ENSPMGG00000006497	tarbp2	100	90.145	Periophthalmus_magnuspinnatus
ENSMZEG00005006895	tarbp2	100	63.836	ENSPEMG00000014285	Tarbp2	100	62.740	Peromyscus_maniculatus_bairdii
ENSMZEG00005006895	tarbp2	92	61.562	ENSPMAG00000000105	tarbp2	99	61.562	Petromyzon_marinus
ENSMZEG00005006895	tarbp2	100	68.406	ENSPCIG00000006672	TARBP2	92	68.406	Phascolarctos_cinereus
ENSMZEG00005006895	tarbp2	100	90.435	ENSPFOG00000007586	tarbp2	100	90.435	Poecilia_formosa
ENSMZEG00005006895	tarbp2	100	89.855	ENSPLAG00000017659	tarbp2	100	89.855	Poecilia_latipinna
ENSMZEG00005006895	tarbp2	100	90.435	ENSPMEG00000007775	tarbp2	100	90.435	Poecilia_mexicana
ENSMZEG00005006895	tarbp2	100	89.855	ENSPREG00000007815	tarbp2	100	89.855	Poecilia_reticulata
ENSMZEG00005006895	tarbp2	97	65.976	ENSPPYG00000004583	TARBP2	97	66.469	Pongo_abelii
ENSMZEG00005006895	tarbp2	78	62.543	ENSPCAG00000005352	TARBP2	60	71.041	Procavia_capensis
ENSMZEG00005006895	tarbp2	100	65.027	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSMZEG00005006895	tarbp2	100	64.754	ENSPVAG00000012286	TARBP2	100	63.661	Pteropus_vampyrus
ENSMZEG00005006895	tarbp2	100	99.710	ENSPNYG00000014125	tarbp2	100	99.710	Pundamilia_nyererei
ENSMZEG00005006895	tarbp2	100	83.526	ENSPNAG00000011128	tarbp2	100	83.526	Pygocentrus_nattereri
ENSMZEG00005006895	tarbp2	100	64.110	ENSRNOG00000042355	Tarbp2	100	64.110	Rattus_norvegicus
ENSMZEG00005006895	tarbp2	100	64.481	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSMZEG00005006895	tarbp2	100	64.481	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSMZEG00005006895	tarbp2	100	64.481	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSMZEG00005006895	tarbp2	94	70.988	ENSSHAG00000007064	TARBP2	100	70.988	Sarcophilus_harrisii
ENSMZEG00005006895	tarbp2	100	79.387	ENSSFOG00015010784	tarbp2	100	79.050	Scleropages_formosus
ENSMZEG00005006895	tarbp2	100	91.453	ENSSMAG00000012769	tarbp2	100	91.453	Scophthalmus_maximus
ENSMZEG00005006895	tarbp2	100	95.652	ENSSDUG00000018818	tarbp2	100	95.652	Seriola_dumerili
ENSMZEG00005006895	tarbp2	100	95.362	ENSSLDG00000001835	tarbp2	100	95.362	Seriola_lalandi_dorsalis
ENSMZEG00005006895	tarbp2	76	67.164	ENSSARG00000001010	TARBP2	73	67.164	Sorex_araneus
ENSMZEG00005006895	tarbp2	63	89.474	ENSSPUG00000005895	TARBP2	67	88.136	Sphenodon_punctatus
ENSMZEG00005006895	tarbp2	100	95.362	ENSSPAG00000022797	tarbp2	100	95.362	Stegastes_partitus
ENSMZEG00005006895	tarbp2	100	65.574	ENSSSCG00000000276	TARBP2	100	66.377	Sus_scrofa
ENSMZEG00005006895	tarbp2	71	56.202	ENSTGUG00000017031	TARBP2	100	55.814	Taeniopygia_guttata
ENSMZEG00005006895	tarbp2	100	91.304	ENSTRUG00000014379	tarbp2	100	91.304	Takifugu_rubripes
ENSMZEG00005006895	tarbp2	100	90.725	ENSTNIG00000007065	tarbp2	100	90.725	Tetraodon_nigroviridis
ENSMZEG00005006895	tarbp2	100	65.027	ENSTTRG00000017177	TARBP2	100	64.481	Tursiops_truncatus
ENSMZEG00005006895	tarbp2	100	64.754	ENSUAMG00000009011	TARBP2	100	64.481	Ursus_americanus
ENSMZEG00005006895	tarbp2	100	64.208	ENSUMAG00000010461	TARBP2	100	63.934	Ursus_maritimus
ENSMZEG00005006895	tarbp2	100	64.208	ENSVVUG00000028150	TARBP2	100	65.797	Vulpes_vulpes
ENSMZEG00005006895	tarbp2	97	68.895	ENSXETG00000012644	tarbp2	97	68.605	Xenopus_tropicalis
ENSMZEG00005006895	tarbp2	100	90.725	ENSXMAG00000017836	tarbp2	100	90.725	Xiphophorus_maculatus