EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005006947 (Gene tree)
Gene ID: 101478348
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2378 bases
Position: chrLG19:23383109-23385486
Accession: 101478348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009140	PseudoU_synth_2	PF00849.22	2.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009489	-	1720	XM_004540530	ENSMZEP00005009140	524 (aa)	XP_004540587	UPI000329C914

Gene Model

Click here to download ENSMZEG00005006947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005006947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005006947	rpusd2	91	56.813	ENSG00000166133	RPUSD2	80	57.609	Homo_sapiens
ENSMZEG00005006947	rpusd2	100	80.000	ENSAPOG00000000817	rpusd2	91	80.000	Acanthochromis_polyacanthus
ENSMZEG00005006947	rpusd2	94	54.930	ENSAMEG00000016996	RPUSD2	80	57.391	Ailuropoda_melanoleuca
ENSMZEG00005006947	rpusd2	100	85.769	ENSACIG00000024029	rpusd2	100	85.769	Amphilophus_citrinellus
ENSMZEG00005006947	rpusd2	100	80.603	ENSAOCG00000015237	rpusd2	91	80.603	Amphiprion_ocellaris
ENSMZEG00005006947	rpusd2	100	80.414	ENSAPEG00000021763	rpusd2	91	80.414	Amphiprion_percula
ENSMZEG00005006947	rpusd2	100	75.368	ENSATEG00000015242	rpusd2	90	75.368	Anabas_testudineus
ENSMZEG00005006947	rpusd2	85	59.865	ENSAPLG00000004723	RPUSD2	100	59.865	Anas_platyrhynchos
ENSMZEG00005006947	rpusd2	88	57.806	ENSACAG00000013893	RPUSD2	91	57.806	Anolis_carolinensis
ENSMZEG00005006947	rpusd2	99	55.000	ENSANAG00000009691	RPUSD2	80	58.442	Aotus_nancymaae
ENSMZEG00005006947	rpusd2	100	100.000	ENSACLG00000019531	rpusd2	91	100.000	Astatotilapia_calliptera
ENSMZEG00005006947	rpusd2	89	67.689	ENSAMXG00000013376	rpusd2	80	68.443	Astyanax_mexicanus
ENSMZEG00005006947	rpusd2	92	56.024	ENSBTAG00000003193	RPUSD2	79	57.356	Bos_taurus
ENSMZEG00005006947	rpusd2	81	33.019	WBGene00019498	K07E8.7	97	32.783	Caenorhabditis_elegans
ENSMZEG00005006947	rpusd2	91	56.485	ENSCJAG00000020841	RPUSD2	80	57.143	Callithrix_jacchus
ENSMZEG00005006947	rpusd2	99	53.861	ENSCAFG00000009165	RPUSD2	86	53.179	Canis_familiaris
ENSMZEG00005006947	rpusd2	99	53.861	ENSCAFG00020005849	RPUSD2	86	53.179	Canis_lupus_dingo
ENSMZEG00005006947	rpusd2	92	57.287	ENSCHIG00000006152	RPUSD2	79	58.710	Capra_hircus
ENSMZEG00005006947	rpusd2	91	57.741	ENSTSYG00000012844	RPUSD2	81	58.442	Carlito_syrichta
ENSMZEG00005006947	rpusd2	96	55.159	ENSCPOG00000013201	RPUSD2	80	57.952	Cavia_porcellus
ENSMZEG00005006947	rpusd2	97	55.403	ENSCCAG00000024378	RPUSD2	80	58.099	Cebus_capucinus
ENSMZEG00005006947	rpusd2	91	56.133	ENSCATG00000043734	RPUSD2	80	56.774	Cercocebus_atys
ENSMZEG00005006947	rpusd2	94	55.714	ENSCLAG00000011862	RPUSD2	80	57.516	Chinchilla_lanigera
ENSMZEG00005006947	rpusd2	91	56.133	ENSCSAG00000007538	RPUSD2	85	56.774	Chlorocebus_sabaeus
ENSMZEG00005006947	rpusd2	70	54.372	ENSCHOG00000004834	RPUSD2	63	54.496	Choloepus_hoffmanni
ENSMZEG00005006947	rpusd2	91	58.200	ENSCPBG00000013419	RPUSD2	88	58.678	Chrysemys_picta_bellii
ENSMZEG00005006947	rpusd2	98	54.159	ENSCANG00000003659	RPUSD2	80	56.774	Colobus_angolensis_palliatus
ENSMZEG00005006947	rpusd2	91	58.159	ENSCGRG00001009839	Rpusd2	76	58.785	Cricetulus_griseus_chok1gshd
ENSMZEG00005006947	rpusd2	91	58.159	ENSCGRG00000012348	Rpusd2	78	58.785	Cricetulus_griseus_crigri
ENSMZEG00005006947	rpusd2	99	69.829	ENSCSEG00000001953	rpusd2	86	70.736	Cynoglossus_semilaevis
ENSMZEG00005006947	rpusd2	99	75.862	ENSCVAG00000010848	rpusd2	88	76.608	Cyprinodon_variegatus
ENSMZEG00005006947	rpusd2	94	68.889	ENSDARG00000060992	rpusd2	82	68.496	Danio_rerio
ENSMZEG00005006947	rpusd2	98	52.290	ENSDNOG00000047745	RPUSD2	81	55.864	Dasypus_novemcinctus
ENSMZEG00005006947	rpusd2	87	58.297	ENSDORG00000009092	Rpusd2	99	58.297	Dipodomys_ordii
ENSMZEG00005006947	rpusd2	98	42.912	FBgn0032256	RluA-2	87	43.774	Drosophila_melanogaster
ENSMZEG00005006947	rpusd2	94	45.648	FBgn0051719	RluA-1	63	47.083	Drosophila_melanogaster
ENSMZEG00005006947	rpusd2	91	57.442	ENSETEG00000008581	RPUSD2	82	58.351	Echinops_telfairi
ENSMZEG00005006947	rpusd2	84	35.281	ENSEBUG00000012149	rpusd2	83	35.281	Eptatretus_burgeri
ENSMZEG00005006947	rpusd2	91	57.173	ENSEASG00005016463	RPUSD2	78	57.849	Equus_asinus_asinus
ENSMZEG00005006947	rpusd2	91	57.380	ENSECAG00000024178	RPUSD2	78	58.065	Equus_caballus
ENSMZEG00005006947	rpusd2	91	49.275	ENSEEUG00000005132	RPUSD2	83	49.574	Erinaceus_europaeus
ENSMZEG00005006947	rpusd2	97	68.173	ENSELUG00000016786	rpusd2	91	67.780	Esox_lucius
ENSMZEG00005006947	rpusd2	94	54.930	ENSFCAG00000040796	RPUSD2	79	57.174	Felis_catus
ENSMZEG00005006947	rpusd2	86	60.573	ENSFALG00000001122	RPUSD2	97	60.776	Ficedula_albicollis
ENSMZEG00005006947	rpusd2	91	56.367	ENSFDAG00000003070	RPUSD2	85	57.235	Fukomys_damarensis
ENSMZEG00005006947	rpusd2	95	77.092	ENSFHEG00000007518	rpusd2	88	77.092	Fundulus_heteroclitus
ENSMZEG00005006947	rpusd2	94	70.707	ENSGMOG00000011014	rpusd2	99	70.707	Gadus_morhua
ENSMZEG00005006947	rpusd2	92	57.430	ENSGALG00000041216	RPUSD2	94	58.873	Gallus_gallus
ENSMZEG00005006947	rpusd2	95	75.697	ENSGAFG00000003390	rpusd2	85	75.697	Gambusia_affinis
ENSMZEG00005006947	rpusd2	99	73.485	ENSGACG00000008656	rpusd2	99	73.485	Gasterosteus_aculeatus
ENSMZEG00005006947	rpusd2	91	60.042	ENSGAGG00000013098	RPUSD2	85	60.606	Gopherus_agassizii
ENSMZEG00005006947	rpusd2	91	55.625	ENSGGOG00000006684	RPUSD2	80	56.371	Gorilla_gorilla
ENSMZEG00005006947	rpusd2	100	99.427	ENSHBUG00000023777	rpusd2	91	99.427	Haplochromis_burtoni
ENSMZEG00005006947	rpusd2	91	56.092	ENSHGLG00000012765	RPUSD2	80	56.739	Heterocephalus_glaber_female
ENSMZEG00005006947	rpusd2	91	56.092	ENSHGLG00100006653	RPUSD2	80	56.739	Heterocephalus_glaber_male
ENSMZEG00005006947	rpusd2	99	73.384	ENSHCOG00000015587	rpusd2	87	73.384	Hippocampus_comes
ENSMZEG00005006947	rpusd2	94	68.571	ENSIPUG00000021006	rpusd2	81	68.367	Ictalurus_punctatus
ENSMZEG00005006947	rpusd2	94	56.504	ENSSTOG00000025619	RPUSD2	79	58.785	Ictidomys_tridecemlineatus
ENSMZEG00005006947	rpusd2	88	59.091	ENSJJAG00000023160	Rpusd2	82	59.091	Jaculus_jaculus
ENSMZEG00005006947	rpusd2	98	76.493	ENSKMAG00000006618	rpusd2	89	75.660	Kryptolebias_marmoratus
ENSMZEG00005006947	rpusd2	98	76.654	ENSLBEG00000021571	rpusd2	91	74.953	Labrus_bergylta
ENSMZEG00005006947	rpusd2	87	58.531	ENSLACG00000017338	RPUSD2	99	58.531	Latimeria_chalumnae
ENSMZEG00005006947	rpusd2	97	63.846	ENSLOCG00000014755	rpusd2	99	63.846	Lepisosteus_oculatus
ENSMZEG00005006947	rpusd2	96	53.672	ENSLAFG00000015588	RPUSD2	83	58.442	Loxodonta_africana
ENSMZEG00005006947	rpusd2	91	56.133	ENSMFAG00000045062	RPUSD2	80	56.774	Macaca_fascicularis
ENSMZEG00005006947	rpusd2	91	56.133	ENSMMUG00000001483	RPUSD2	80	56.774	Macaca_mulatta
ENSMZEG00005006947	rpusd2	91	48.770	ENSMNEG00000041429	RPUSD2	80	49.153	Macaca_nemestrina
ENSMZEG00005006947	rpusd2	69	54.201	ENSMLEG00000036551	RPUSD2	80	54.201	Mandrillus_leucophaeus
ENSMZEG00005006947	rpusd2	100	73.675	ENSMAMG00000001077	rpusd2	88	73.675	Mastacembelus_armatus
ENSMZEG00005006947	rpusd2	92	59.006	ENSMGAG00000003058	RPUSD2	97	60.776	Meleagris_gallopavo
ENSMZEG00005006947	rpusd2	99	54.319	ENSMAUG00000020467	Rpusd2	78	58.531	Mesocricetus_auratus
ENSMZEG00005006947	rpusd2	91	56.813	ENSMICG00000028637	RPUSD2	80	57.484	Microcebus_murinus
ENSMZEG00005006947	rpusd2	96	56.886	ENSMOCG00000020061	Rpusd2	79	59.524	Microtus_ochrogaster
ENSMZEG00005006947	rpusd2	100	77.099	ENSMMOG00000012020	rpusd2	90	77.099	Mola_mola
ENSMZEG00005006947	rpusd2	98	53.626	ENSMODG00000000300	RPUSD2	80	57.235	Monodelphis_domestica
ENSMZEG00005006947	rpusd2	100	74.586	ENSMALG00000010024	rpusd2	90	74.586	Monopterus_albus
ENSMZEG00005006947	rpusd2	91	56.341	MGP_CAROLIEiJ_G0024130	Rpusd2	78	56.897	Mus_caroli
ENSMZEG00005006947	rpusd2	91	57.113	ENSMUSG00000027324	Rpusd2	78	57.701	Mus_musculus
ENSMZEG00005006947	rpusd2	91	57.708	MGP_PahariEiJ_G0025573	Rpusd2	78	58.315	Mus_pahari
ENSMZEG00005006947	rpusd2	91	56.936	MGP_SPRETEiJ_G0025046	Rpusd2	79	57.511	Mus_spretus
ENSMZEG00005006947	rpusd2	98	54.545	ENSMPUG00000008517	RPUSD2	86	54.143	Mustela_putorius_furo
ENSMZEG00005006947	rpusd2	91	57.442	ENSMLUG00000007971	RPUSD2	87	58.009	Myotis_lucifugus
ENSMZEG00005006947	rpusd2	99	55.153	ENSNGAG00000014126	Rpusd2	80	59.002	Nannospalax_galili
ENSMZEG00005006947	rpusd2	100	93.893	ENSNBRG00000010070	rpusd2	91	93.893	Neolamprologus_brichardi
ENSMZEG00005006947	rpusd2	91	56.108	ENSNLEG00000035735	RPUSD2	80	56.867	Nomascus_leucogenys
ENSMZEG00005006947	rpusd2	95	55.311	ENSMEUG00000008500	RPUSD2	84	57.667	Notamacropus_eugenii
ENSMZEG00005006947	rpusd2	91	57.023	ENSOPRG00000014177	-	81	57.701	Ochotona_princeps
ENSMZEG00005006947	rpusd2	90	57.203	ENSODEG00000017193	RPUSD2	81	57.734	Octodon_degus
ENSMZEG00005006947	rpusd2	99	91.985	ENSONIG00000020102	rpusd2	100	91.985	Oreochromis_niloticus
ENSMZEG00005006947	rpusd2	91	57.380	ENSOCUG00000015745	RPUSD2	78	58.065	Oryctolagus_cuniculus
ENSMZEG00005006947	rpusd2	96	74.008	ENSORLG00000015516	rpusd2	88	74.008	Oryzias_latipes
ENSMZEG00005006947	rpusd2	99	72.340	ENSORLG00020010533	rpusd2	91	72.340	Oryzias_latipes_hni
ENSMZEG00005006947	rpusd2	99	72.062	ENSORLG00015009206	rpusd2	91	72.062	Oryzias_latipes_hsok
ENSMZEG00005006947	rpusd2	98	73.190	ENSOMEG00000007355	rpusd2	81	72.039	Oryzias_melastigma
ENSMZEG00005006947	rpusd2	91	57.652	ENSOGAG00000004867	RPUSD2	84	58.351	Otolemur_garnettii
ENSMZEG00005006947	rpusd2	92	57.700	ENSOARG00000020235	RPUSD2	81	58.925	Ovis_aries
ENSMZEG00005006947	rpusd2	91	56.813	ENSPPAG00000032874	RPUSD2	80	57.609	Pan_paniscus
ENSMZEG00005006947	rpusd2	98	53.981	ENSPPRG00000010446	RPUSD2	87	53.372	Panthera_pardus
ENSMZEG00005006947	rpusd2	91	55.950	ENSPTIG00000013316	RPUSD2	80	57.174	Panthera_tigris_altaica
ENSMZEG00005006947	rpusd2	91	56.813	ENSPTRG00000006924	RPUSD2	80	57.609	Pan_troglodytes
ENSMZEG00005006947	rpusd2	91	56.133	ENSPANG00000019339	RPUSD2	80	56.774	Papio_anubis
ENSMZEG00005006947	rpusd2	95	61.939	ENSPKIG00000023017	rpusd2	82	61.939	Paramormyrops_kingsleyae
ENSMZEG00005006947	rpusd2	70	58.871	ENSPSIG00000012680	RPUSD2	100	58.871	Pelodiscus_sinensis
ENSMZEG00005006947	rpusd2	85	79.442	ENSPMGG00000018165	rpusd2	88	79.442	Periophthalmus_magnuspinnatus
ENSMZEG00005006947	rpusd2	91	58.038	ENSPEMG00000012878	Rpusd2	82	58.658	Peromyscus_maniculatus_bairdii
ENSMZEG00005006947	rpusd2	81	67.347	ENSPCIG00000023199	RPUSD2	79	67.347	Phascolarctos_cinereus
ENSMZEG00005006947	rpusd2	96	75.828	ENSPFOG00000006829	rpusd2	88	75.828	Poecilia_formosa
ENSMZEG00005006947	rpusd2	96	75.634	ENSPLAG00000022914	rpusd2	99	75.634	Poecilia_latipinna
ENSMZEG00005006947	rpusd2	96	75.634	ENSPMEG00000009835	rpusd2	99	75.634	Poecilia_mexicana
ENSMZEG00005006947	rpusd2	96	75.828	ENSPREG00000016441	rpusd2	85	75.828	Poecilia_reticulata
ENSMZEG00005006947	rpusd2	91	55.717	ENSPPYG00000006355	RPUSD2	80	56.466	Pongo_abelii
ENSMZEG00005006947	rpusd2	98	54.086	ENSPCOG00000028019	RPUSD2	80	57.484	Propithecus_coquereli
ENSMZEG00005006947	rpusd2	91	57.023	ENSPVAG00000001837	RPUSD2	80	58.009	Pteropus_vampyrus
ENSMZEG00005006947	rpusd2	96	90.891	ENSPNYG00000021507	rpusd2	95	90.891	Pundamilia_nyererei
ENSMZEG00005006947	rpusd2	91	57.741	ENSRNOG00000046797	Rpusd2	78	58.351	Rattus_norvegicus
ENSMZEG00005006947	rpusd2	91	57.741	ENSRNOG00000010528	LOC100911166	78	58.351	Rattus_norvegicus
ENSMZEG00005006947	rpusd2	91	56.133	ENSRBIG00000030813	RPUSD2	80	56.774	Rhinopithecus_bieti
ENSMZEG00005006947	rpusd2	91	55.925	ENSRROG00000026664	RPUSD2	80	56.559	Rhinopithecus_roxellana
ENSMZEG00005006947	rpusd2	52	46.043	YDL036C	-	58	47.212	Saccharomyces_cerevisiae
ENSMZEG00005006947	rpusd2	91	57.620	ENSSBOG00000035031	RPUSD2	80	58.009	Saimiri_boliviensis_boliviensis
ENSMZEG00005006947	rpusd2	70	53.784	ENSSHAG00000015108	RPUSD2	91	54.891	Sarcophilus_harrisii
ENSMZEG00005006947	rpusd2	96	59.785	ENSSFOG00015019057	rpusd2	83	59.785	Scleropages_formosus
ENSMZEG00005006947	rpusd2	100	76.030	ENSSMAG00000000903	rpusd2	100	76.030	Scophthalmus_maximus
ENSMZEG00005006947	rpusd2	100	75.686	ENSSDUG00000019139	rpusd2	90	75.686	Seriola_dumerili
ENSMZEG00005006947	rpusd2	100	76.147	ENSSLDG00000005938	rpusd2	90	76.147	Seriola_lalandi_dorsalis
ENSMZEG00005006947	rpusd2	92	56.735	ENSSARG00000002792	RPUSD2	81	58.621	Sorex_araneus
ENSMZEG00005006947	rpusd2	91	57.203	ENSSPUG00000001206	RPUSD2	89	57.569	Sphenodon_punctatus
ENSMZEG00005006947	rpusd2	100	77.841	ENSSPAG00000003578	rpusd2	91	77.841	Stegastes_partitus
ENSMZEG00005006947	rpusd2	98	53.654	ENSSSCG00000036700	RPUSD2	79	56.838	Sus_scrofa
ENSMZEG00005006947	rpusd2	97	74.369	ENSTRUG00000025880	rpusd2	97	74.369	Takifugu_rubripes
ENSMZEG00005006947	rpusd2	98	72.427	ENSTNIG00000017329	rpusd2	99	72.427	Tetraodon_nigroviridis
ENSMZEG00005006947	rpusd2	98	48.069	ENSTBEG00000007933	RPUSD2	80	51.082	Tupaia_belangeri
ENSMZEG00005006947	rpusd2	91	59.091	ENSTTRG00000010585	RPUSD2	80	59.743	Tursiops_truncatus
ENSMZEG00005006947	rpusd2	91	56.576	ENSUAMG00000001470	RPUSD2	86	57.826	Ursus_americanus
ENSMZEG00005006947	rpusd2	94	55.332	ENSUMAG00000012487	RPUSD2	70	57.826	Ursus_maritimus
ENSMZEG00005006947	rpusd2	90	56.842	ENSVPAG00000003844	RPUSD2	80	57.451	Vicugna_pacos
ENSMZEG00005006947	rpusd2	99	53.950	ENSVVUG00000026590	RPUSD2	86	53.372	Vulpes_vulpes
ENSMZEG00005006947	rpusd2	91	57.442	ENSXETG00000015973	rpusd2	95	58.225	Xenopus_tropicalis
ENSMZEG00005006947	rpusd2	96	74.659	ENSXMAG00000021821	rpusd2	99	74.659	Xiphophorus_maculatus