EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007142 (Gene tree)
Gene ID: 101474747
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 4212 bases
Position: chrLG17:24936657-24940868
Accession: 101474747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009420	zf-C3HC	PF07967.13	2.4e-34	1	1
ENSMZEP00005009420	Rsm1	PF08600.10	9.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009775	-	2494	XM_004548246	ENSMZEP00005009420	498 (aa)	XP_004548303	UPI00032A2695

Gene Model

Click here to download ENSMZEG00005007142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007142	zc3hc1	94	43.182	ENSG00000091732	ZC3HC1	95	43.802	Homo_sapiens
ENSMZEG00005007142	zc3hc1	100	83.400	ENSAPOG00000009078	zc3hc1	100	83.400	Acanthochromis_polyacanthus
ENSMZEG00005007142	zc3hc1	94	42.974	ENSAMEG00000005425	ZC3HC1	94	43.585	Ailuropoda_melanoleuca
ENSMZEG00005007142	zc3hc1	100	89.641	ENSACIG00000019513	zc3hc1	100	89.641	Amphilophus_citrinellus
ENSMZEG00005007142	zc3hc1	100	81.800	ENSAOCG00000024310	zc3hc1	100	82.000	Amphiprion_ocellaris
ENSMZEG00005007142	zc3hc1	100	81.200	ENSAPEG00000004907	zc3hc1	100	81.400	Amphiprion_percula
ENSMZEG00005007142	zc3hc1	87	81.986	ENSATEG00000016898	zc3hc1	90	81.986	Anabas_testudineus
ENSMZEG00005007142	zc3hc1	86	43.400	ENSAPLG00000003832	ZC3HC1	96	43.400	Anas_platyrhynchos
ENSMZEG00005007142	zc3hc1	97	43.327	ENSACAG00000001638	ZC3HC1	97	43.327	Anolis_carolinensis
ENSMZEG00005007142	zc3hc1	94	41.129	ENSANAG00000022213	ZC3HC1	92	44.910	Aotus_nancymaae
ENSMZEG00005007142	zc3hc1	91	100.000	ENSACLG00000025033	zc3hc1	99	100.000	Astatotilapia_calliptera
ENSMZEG00005007142	zc3hc1	95	54.526	ENSAMXG00000036792	zc3hc1	97	54.526	Astyanax_mexicanus
ENSMZEG00005007142	zc3hc1	96	43.625	ENSBTAG00000011247	ZC3HC1	96	44.378	Bos_taurus
ENSMZEG00005007142	zc3hc1	94	42.713	ENSCJAG00000010536	ZC3HC1	92	46.341	Callithrix_jacchus
ENSMZEG00005007142	zc3hc1	94	43.149	ENSCAFG00000031850	-	94	43.354	Canis_familiaris
ENSMZEG00005007142	zc3hc1	94	42.740	ENSCAFG00000028735	-	94	42.945	Canis_familiaris
ENSMZEG00005007142	zc3hc1	94	42.740	ENSCAFG00000029401	-	92	42.945	Canis_familiaris
ENSMZEG00005007142	zc3hc1	94	42.886	ENSCAFG00000001499	-	92	43.089	Canis_familiaris
ENSMZEG00005007142	zc3hc1	94	41.955	ENSCAFG00020023333	-	94	42.159	Canis_lupus_dingo
ENSMZEG00005007142	zc3hc1	94	42.945	ENSCAFG00020006829	-	94	43.149	Canis_lupus_dingo
ENSMZEG00005007142	zc3hc1	95	38.723	ENSCHIG00000014103	ZC3HC1	96	39.479	Capra_hircus
ENSMZEG00005007142	zc3hc1	94	42.363	ENSTSYG00000002843	ZC3HC1	94	42.331	Carlito_syrichta
ENSMZEG00005007142	zc3hc1	87	37.194	ENSCAPG00000016300	ZC3HC1	93	39.130	Cavia_aperea
ENSMZEG00005007142	zc3hc1	94	43.443	ENSCPOG00000014034	ZC3HC1	93	47.170	Cavia_porcellus
ENSMZEG00005007142	zc3hc1	94	30.986	ENSCCAG00000020384	ZC3HC1	98	37.143	Cebus_capucinus
ENSMZEG00005007142	zc3hc1	94	42.510	ENSCATG00000023130	ZC3HC1	98	42.536	Cercocebus_atys
ENSMZEG00005007142	zc3hc1	82	33.575	ENSCLAG00000008260	ZC3HC1	87	33.575	Chinchilla_lanigera
ENSMZEG00005007142	zc3hc1	73	39.211	ENSCSAG00000009881	ZC3HC1	96	40.000	Chlorocebus_sabaeus
ENSMZEG00005007142	zc3hc1	87	44.667	ENSCHOG00000011846	ZC3HC1	95	44.667	Choloepus_hoffmanni
ENSMZEG00005007142	zc3hc1	96	44.578	ENSCPBG00000017519	ZC3HC1	96	44.556	Chrysemys_picta_bellii
ENSMZEG00005007142	zc3hc1	94	42.536	ENSCANG00000029091	ZC3HC1	94	43.149	Colobus_angolensis_palliatus
ENSMZEG00005007142	zc3hc1	94	43.326	ENSCGRG00001018805	Zc3hc1	93	45.593	Cricetulus_griseus_chok1gshd
ENSMZEG00005007142	zc3hc1	94	42.300	ENSCGRG00000017114	Zc3hc1	94	42.300	Cricetulus_griseus_crigri
ENSMZEG00005007142	zc3hc1	100	74.900	ENSCSEG00000009284	zc3hc1	98	74.900	Cynoglossus_semilaevis
ENSMZEG00005007142	zc3hc1	99	73.239	ENSCVAG00000011566	zc3hc1	99	73.239	Cyprinodon_variegatus
ENSMZEG00005007142	zc3hc1	100	62.574	ENSDARG00000062651	zc3hc1	100	62.574	Danio_rerio
ENSMZEG00005007142	zc3hc1	94	43.354	ENSDNOG00000045016	ZC3HC1	94	43.354	Dasypus_novemcinctus
ENSMZEG00005007142	zc3hc1	83	43.665	ENSDORG00000008697	Zc3hc1	87	47.331	Dipodomys_ordii
ENSMZEG00005007142	zc3hc1	87	45.011	ENSEASG00005008789	ZC3HC1	92	46.102	Equus_asinus_asinus
ENSMZEG00005007142	zc3hc1	94	42.974	ENSECAG00000017886	ZC3HC1	94	43.585	Equus_caballus
ENSMZEG00005007142	zc3hc1	64	48.824	ENSEEUG00000003123	ZC3HC1	65	48.824	Erinaceus_europaeus
ENSMZEG00005007142	zc3hc1	99	63.189	ENSELUG00000023168	zc3hc1	99	63.851	Esox_lucius
ENSMZEG00005007142	zc3hc1	94	42.945	ENSFCAG00000010429	ZC3HC1	92	46.037	Felis_catus
ENSMZEG00005007142	zc3hc1	86	42.163	ENSFALG00000005006	ZC3HC1	94	42.129	Ficedula_albicollis
ENSMZEG00005007142	zc3hc1	94	42.770	ENSFDAG00000019897	ZC3HC1	94	43.763	Fukomys_damarensis
ENSMZEG00005007142	zc3hc1	99	74.395	ENSFHEG00000020149	zc3hc1	99	74.395	Fundulus_heteroclitus
ENSMZEG00005007142	zc3hc1	99	66.801	ENSGMOG00000002914	zc3hc1	99	66.801	Gadus_morhua
ENSMZEG00005007142	zc3hc1	94	42.915	ENSGALG00000008003	ZC3HC1	95	43.117	Gallus_gallus
ENSMZEG00005007142	zc3hc1	99	76.411	ENSGAFG00000016095	zc3hc1	99	76.411	Gambusia_affinis
ENSMZEG00005007142	zc3hc1	99	76.305	ENSGACG00000019706	zc3hc1	100	76.305	Gasterosteus_aculeatus
ENSMZEG00005007142	zc3hc1	77	43.142	ENSGAGG00000016106	ZC3HC1	99	44.361	Gopherus_agassizii
ENSMZEG00005007142	zc3hc1	94	43.388	ENSGGOG00000015504	ZC3HC1	92	45.732	Gorilla_gorilla
ENSMZEG00005007142	zc3hc1	100	99.799	ENSHBUG00000008347	zc3hc1	100	99.799	Haplochromis_burtoni
ENSMZEG00005007142	zc3hc1	94	42.536	ENSHGLG00000005085	ZC3HC1	94	43.737	Heterocephalus_glaber_female
ENSMZEG00005007142	zc3hc1	94	42.623	ENSHGLG00100011395	ZC3HC1	94	43.827	Heterocephalus_glaber_male
ENSMZEG00005007142	zc3hc1	100	70.281	ENSHCOG00000014309	zc3hc1	100	70.281	Hippocampus_comes
ENSMZEG00005007142	zc3hc1	94	41.718	ENSSTOG00000023599	-	94	42.331	Ictidomys_tridecemlineatus
ENSMZEG00005007142	zc3hc1	100	76.754	ENSKMAG00000015315	zc3hc1	93	76.754	Kryptolebias_marmoratus
ENSMZEG00005007142	zc3hc1	100	75.000	ENSLBEG00000017325	zc3hc1	100	75.000	Labrus_bergylta
ENSMZEG00005007142	zc3hc1	79	43.705	ENSLACG00000013032	ZC3HC1	97	43.705	Latimeria_chalumnae
ENSMZEG00005007142	zc3hc1	99	53.411	ENSLOCG00000015963	zc3hc1	99	53.411	Lepisosteus_oculatus
ENSMZEG00005007142	zc3hc1	94	41.785	ENSLAFG00000001292	ZC3HC1	94	42.394	Loxodonta_africana
ENSMZEG00005007142	zc3hc1	94	42.536	ENSMFAG00000030176	ZC3HC1	98	42.562	Macaca_fascicularis
ENSMZEG00005007142	zc3hc1	94	41.429	ENSMMUG00000006155	ZC3HC1	98	42.562	Macaca_mulatta
ENSMZEG00005007142	zc3hc1	94	42.536	ENSMNEG00000011833	ZC3HC1	98	42.562	Macaca_nemestrina
ENSMZEG00005007142	zc3hc1	94	42.536	ENSMLEG00000027328	ZC3HC1	98	42.562	Mandrillus_leucophaeus
ENSMZEG00005007142	zc3hc1	100	83.633	ENSMAMG00000010691	zc3hc1	100	83.633	Mastacembelus_armatus
ENSMZEG00005007142	zc3hc1	94	41.118	ENSMGAG00000002977	ZC3HC1	95	41.071	Meleagris_gallopavo
ENSMZEG00005007142	zc3hc1	82	40.706	ENSMAUG00000017032	Zc3hc1	90	40.941	Mesocricetus_auratus
ENSMZEG00005007142	zc3hc1	94	42.566	ENSMICG00000009167	ZC3HC1	92	44.817	Microcebus_murinus
ENSMZEG00005007142	zc3hc1	94	43.238	ENSMOCG00000015239	Zc3hc1	93	46.061	Microtus_ochrogaster
ENSMZEG00005007142	zc3hc1	88	76.644	ENSMMOG00000002204	zc3hc1	99	76.644	Mola_mola
ENSMZEG00005007142	zc3hc1	97	33.333	ENSMODG00000014630	ZC3HC1	96	33.776	Monodelphis_domestica
ENSMZEG00005007142	zc3hc1	98	79.184	ENSMALG00000014447	zc3hc1	100	79.600	Monopterus_albus
ENSMZEG00005007142	zc3hc1	95	42.276	MGP_CAROLIEiJ_G0028183	Zc3hc1	93	45.427	Mus_caroli
ENSMZEG00005007142	zc3hc1	95	42.191	ENSMUSG00000039130	Zc3hc1	93	45.593	Mus_musculus
ENSMZEG00005007142	zc3hc1	94	39.059	MGP_PahariEiJ_G0021941	Zc3hc1	92	40.729	Mus_pahari
ENSMZEG00005007142	zc3hc1	95	42.191	MGP_SPRETEiJ_G0029183	Zc3hc1	93	45.593	Mus_spretus
ENSMZEG00005007142	zc3hc1	89	42.672	ENSMPUG00000005297	ZC3HC1	88	43.629	Mustela_putorius_furo
ENSMZEG00005007142	zc3hc1	94	43.293	ENSMLUG00000000063	-	94	43.293	Myotis_lucifugus
ENSMZEG00005007142	zc3hc1	67	37.079	ENSMLUG00000029228	-	98	37.079	Myotis_lucifugus
ENSMZEG00005007142	zc3hc1	95	43.522	ENSNGAG00000019014	Zc3hc1	92	48.308	Nannospalax_galili
ENSMZEG00005007142	zc3hc1	100	98.594	ENSNBRG00000004577	zc3hc1	100	98.594	Neolamprologus_brichardi
ENSMZEG00005007142	zc3hc1	94	42.828	ENSNLEG00000012698	ZC3HC1	94	43.434	Nomascus_leucogenys
ENSMZEG00005007142	zc3hc1	95	44.177	ENSMEUG00000011023	ZC3HC1	95	44.153	Notamacropus_eugenii
ENSMZEG00005007142	zc3hc1	94	41.057	ENSODEG00000014604	ZC3HC1	93	44.444	Octodon_degus
ENSMZEG00005007142	zc3hc1	100	97.992	ENSONIG00000011644	zc3hc1	100	97.992	Oreochromis_niloticus
ENSMZEG00005007142	zc3hc1	88	39.535	ENSOANG00000011460	ZC3HC1	96	39.958	Ornithorhynchus_anatinus
ENSMZEG00005007142	zc3hc1	94	43.089	ENSOCUG00000017137	ZC3HC1	94	43.699	Oryctolagus_cuniculus
ENSMZEG00005007142	zc3hc1	99	76.673	ENSORLG00000014409	zc3hc1	99	76.908	Oryzias_latipes
ENSMZEG00005007142	zc3hc1	99	77.079	ENSORLG00020015874	zc3hc1	99	77.309	Oryzias_latipes_hni
ENSMZEG00005007142	zc3hc1	99	76.268	ENSORLG00015014641	zc3hc1	99	76.506	Oryzias_latipes_hsok
ENSMZEG00005007142	zc3hc1	99	76.471	ENSOMEG00000000215	zc3hc1	98	76.613	Oryzias_melastigma
ENSMZEG00005007142	zc3hc1	99	76.268	ENSOMEG00000020604	zc3hc1	98	76.411	Oryzias_melastigma
ENSMZEG00005007142	zc3hc1	94	37.014	ENSOGAG00000026193	ZC3HC1	94	38.037	Otolemur_garnettii
ENSMZEG00005007142	zc3hc1	94	43.089	ENSOARG00000004907	ZC3HC1	92	43.878	Ovis_aries
ENSMZEG00005007142	zc3hc1	94	43.182	ENSPPAG00000043172	ZC3HC1	95	43.802	Pan_paniscus
ENSMZEG00005007142	zc3hc1	94	42.740	ENSPPRG00000001004	ZC3HC1	92	45.732	Panthera_pardus
ENSMZEG00005007142	zc3hc1	94	42.945	ENSPTIG00000007823	ZC3HC1	92	46.037	Panthera_tigris_altaica
ENSMZEG00005007142	zc3hc1	94	43.388	ENSPTRG00000019685	ZC3HC1	95	44.008	Pan_troglodytes
ENSMZEG00005007142	zc3hc1	94	41.429	ENSPANG00000014229	ZC3HC1	98	42.562	Papio_anubis
ENSMZEG00005007142	zc3hc1	99	52.446	ENSPKIG00000007172	zc3hc1	99	52.446	Paramormyrops_kingsleyae
ENSMZEG00005007142	zc3hc1	87	42.763	ENSPSIG00000016646	ZC3HC1	87	43.137	Pelodiscus_sinensis
ENSMZEG00005007142	zc3hc1	95	68.267	ENSPMGG00000003548	zc3hc1	95	68.267	Periophthalmus_magnuspinnatus
ENSMZEG00005007142	zc3hc1	94	41.237	ENSPEMG00000000514	Zc3hc1	93	44.377	Peromyscus_maniculatus_bairdii
ENSMZEG00005007142	zc3hc1	95	40.606	ENSPCIG00000020619	ZC3HC1	99	41.832	Phascolarctos_cinereus
ENSMZEG00005007142	zc3hc1	99	75.855	ENSPFOG00000003466	zc3hc1	99	75.855	Poecilia_formosa
ENSMZEG00005007142	zc3hc1	99	75.855	ENSPLAG00000022211	zc3hc1	99	75.855	Poecilia_latipinna
ENSMZEG00005007142	zc3hc1	99	75.855	ENSPMEG00000001458	zc3hc1	99	75.855	Poecilia_mexicana
ENSMZEG00005007142	zc3hc1	99	76.056	ENSPREG00000004004	zc3hc1	99	76.056	Poecilia_reticulata
ENSMZEG00005007142	zc3hc1	94	40.122	ENSPPYG00000017998	ZC3HC1	94	40.733	Pongo_abelii
ENSMZEG00005007142	zc3hc1	87	43.778	ENSPCAG00000001182	ZC3HC1	94	44.643	Procavia_capensis
ENSMZEG00005007142	zc3hc1	94	42.127	ENSPCOG00000017354	ZC3HC1	92	44.817	Propithecus_coquereli
ENSMZEG00005007142	zc3hc1	95	40.204	ENSPVAG00000003195	ZC3HC1	95	40.447	Pteropus_vampyrus
ENSMZEG00005007142	zc3hc1	100	100.000	ENSPNYG00000020692	zc3hc1	100	100.000	Pundamilia_nyererei
ENSMZEG00005007142	zc3hc1	98	53.955	ENSPNAG00000020746	zc3hc1	100	53.955	Pygocentrus_nattereri
ENSMZEG00005007142	zc3hc1	94	41.020	ENSRNOG00000010154	Zc3hc1	94	41.224	Rattus_norvegicus
ENSMZEG00005007142	zc3hc1	87	44.222	ENSRBIG00000029409	ZC3HC1	94	48.097	Rhinopithecus_bieti
ENSMZEG00005007142	zc3hc1	94	42.331	ENSRROG00000041831	ZC3HC1	96	42.589	Rhinopithecus_roxellana
ENSMZEG00005007142	zc3hc1	80	53.043	ENSSBOG00000032787	ZC3HC1	91	40.000	Saimiri_boliviensis_boliviensis
ENSMZEG00005007142	zc3hc1	87	43.902	ENSSHAG00000002529	ZC3HC1	93	43.902	Sarcophilus_harrisii
ENSMZEG00005007142	zc3hc1	99	54.706	ENSSFOG00015003667	zc3hc1	95	54.706	Scleropages_formosus
ENSMZEG00005007142	zc3hc1	100	81.600	ENSSMAG00000000647	zc3hc1	90	81.600	Scophthalmus_maximus
ENSMZEG00005007142	zc3hc1	100	85.000	ENSSDUG00000004241	zc3hc1	98	85.000	Seriola_dumerili
ENSMZEG00005007142	zc3hc1	100	85.200	ENSSLDG00000025056	zc3hc1	98	85.200	Seriola_lalandi_dorsalis
ENSMZEG00005007142	zc3hc1	95	39.271	ENSSARG00000012013	ZC3HC1	94	39.676	Sorex_araneus
ENSMZEG00005007142	zc3hc1	81	39.765	ENSSPUG00000000778	ZC3HC1	80	39.953	Sphenodon_punctatus
ENSMZEG00005007142	zc3hc1	100	84.400	ENSSPAG00000020041	zc3hc1	100	84.400	Stegastes_partitus
ENSMZEG00005007142	zc3hc1	96	43.000	ENSSSCG00000016565	ZC3HC1	99	42.680	Sus_scrofa
ENSMZEG00005007142	zc3hc1	99	67.203	ENSTRUG00000020077	zc3hc1	99	67.203	Takifugu_rubripes
ENSMZEG00005007142	zc3hc1	99	69.000	ENSTNIG00000007585	zc3hc1	99	69.767	Tetraodon_nigroviridis
ENSMZEG00005007142	zc3hc1	95	36.235	ENSTBEG00000005216	ZC3HC1	95	36.235	Tupaia_belangeri
ENSMZEG00005007142	zc3hc1	95	42.308	ENSTTRG00000008458	ZC3HC1	99	42.510	Tursiops_truncatus
ENSMZEG00005007142	zc3hc1	94	43.149	ENSUAMG00000020249	ZC3HC1	94	43.763	Ursus_americanus
ENSMZEG00005007142	zc3hc1	94	42.945	ENSUMAG00000009268	ZC3HC1	94	43.558	Ursus_maritimus
ENSMZEG00005007142	zc3hc1	64	40.841	ENSVPAG00000010846	ZC3HC1	63	41.994	Vicugna_pacos
ENSMZEG00005007142	zc3hc1	89	43.413	ENSVVUG00000012386	ZC3HC1	92	43.629	Vulpes_vulpes
ENSMZEG00005007142	zc3hc1	91	39.958	ENSXETG00000033900	zc3hc1	95	39.958	Xenopus_tropicalis
ENSMZEG00005007142	zc3hc1	99	74.245	ENSXCOG00000013570	zc3hc1	99	74.245	Xiphophorus_couchianus
ENSMZEG00005007142	zc3hc1	91	77.925	ENSXMAG00000010979	zc3hc1	97	77.925	Xiphophorus_maculatus