EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007200 (Gene tree)
Gene ID: 101475515
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 16340 bases
Position: chrLG2:29499782-29516121
Accession: 101475515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009550	RRM_1	PF00076.22	1.4e-24	1	1
ENSMZEP00005009489	RRM_1	PF00076.22	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005009847	-	2866	XM_004545726	ENSMZEP00005009489	509 (aa)	XP_004545783	UPI000329FB34
ENSMZET00005009909	-	2806	XM_004545729	ENSMZEP00005009550	489 (aa)	XP_004545786	UPI0003298C43

Gene Model

Click here to download ENSMZEG00005007200's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007200	cstf2	96	60.377	ENSG00000101811	CSTF2	81	93.407	Homo_sapiens
ENSMZEG00005007200	cstf2	96	91.296	ENSAPOG00000005630	cstf2	100	90.058	Acanthochromis_polyacanthus
ENSMZEG00005007200	cstf2	96	58.814	ENSAMEG00000002082	CSTF2	63	82.645	Ailuropoda_melanoleuca
ENSMZEG00005007200	cstf2	96	89.263	ENSACIG00000012852	cstf2	100	89.879	Amphilophus_citrinellus
ENSMZEG00005007200	cstf2	100	89.453	ENSAOCG00000020905	cstf2	100	88.672	Amphiprion_ocellaris
ENSMZEG00005007200	cstf2	100	89.648	ENSAPEG00000006526	cstf2	100	88.867	Amphiprion_percula
ENSMZEG00005007200	cstf2	100	89.515	ENSATEG00000018186	cstf2	100	89.237	Anabas_testudineus
ENSMZEG00005007200	cstf2	94	58.824	ENSAPLG00000007255	CSTF2	83	81.513	Anas_platyrhynchos
ENSMZEG00005007200	cstf2	96	77.174	ENSANAG00000022342	CSTF2	99	58.478	Aotus_nancymaae
ENSMZEG00005007200	cstf2	100	100.000	ENSACLG00000000779	cstf2	96	100.000	Astatotilapia_calliptera
ENSMZEG00005007200	cstf2	90	88.646	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSMZEG00005007200	cstf2	96	61.140	ENSBTAG00000003547	CSTF2	65	82.645	Bos_taurus
ENSMZEG00005007200	cstf2	96	62.651	ENSCJAG00000004422	CSTF2	52	82.645	Callithrix_jacchus
ENSMZEG00005007200	cstf2	96	61.063	ENSCAFG00000017551	CSTF2	80	65.721	Canis_familiaris
ENSMZEG00005007200	cstf2	96	78.229	ENSCAFG00020007619	CSTF2	80	65.721	Canis_lupus_dingo
ENSMZEG00005007200	cstf2	96	61.313	ENSCHIG00000016994	CSTF2	65	82.645	Capra_hircus
ENSMZEG00005007200	cstf2	97	60.714	ENSCPOG00000015255	CSTF2	84	93.464	Cavia_porcellus
ENSMZEG00005007200	cstf2	96	62.007	ENSCCAG00000032975	CSTF2	99	58.478	Cebus_capucinus
ENSMZEG00005007200	cstf2	96	62.186	ENSCATG00000022835	CSTF2	99	60.963	Cercocebus_atys
ENSMZEG00005007200	cstf2	96	60.959	ENSCLAG00000001904	CSTF2	85	91.667	Chinchilla_lanigera
ENSMZEG00005007200	cstf2	97	68.160	ENSCPBG00000014293	CSTF2	90	69.065	Chrysemys_picta_bellii
ENSMZEG00005007200	cstf2	96	62.186	ENSCANG00000030612	CSTF2	99	60.963	Colobus_angolensis_palliatus
ENSMZEG00005007200	cstf2	96	59.240	ENSCGRG00001023023	Cstf2	66	83.333	Cricetulus_griseus_chok1gshd
ENSMZEG00005007200	cstf2	96	61.566	ENSCGRG00000003897	Cstf2	86	82.917	Cricetulus_griseus_crigri
ENSMZEG00005007200	cstf2	96	87.764	ENSCVAG00000005731	cstf2	100	87.830	Cyprinodon_variegatus
ENSMZEG00005007200	cstf2	77	100.000	ENSDARG00000090788	cstf2	99	89.744	Danio_rerio
ENSMZEG00005007200	cstf2	96	60.653	ENSDORG00000007195	Cstf2	83	94.040	Dipodomys_ordii
ENSMZEG00005007200	cstf2	75	80.000	ENSETEG00000004931	CSTF2	50	82.427	Echinops_telfairi
ENSMZEG00005007200	cstf2	89	56.250	ENSFALG00000003859	CSTF2	84	80.000	Ficedula_albicollis
ENSMZEG00005007200	cstf2	96	76.842	ENSFDAG00000002416	CSTF2	66	83.058	Fukomys_damarensis
ENSMZEG00005007200	cstf2	96	86.139	ENSFHEG00000017065	cstf2	96	86.069	Fundulus_heteroclitus
ENSMZEG00005007200	cstf2	96	76.681	ENSGMOG00000005145	cstf2	99	76.050	Gadus_morhua
ENSMZEG00005007200	cstf2	97	61.272	ENSGALG00000006760	CSTF2	99	61.458	Gallus_gallus
ENSMZEG00005007200	cstf2	96	85.595	ENSGAFG00000020027	cstf2	100	86.172	Gambusia_affinis
ENSMZEG00005007200	cstf2	97	80.077	ENSGACG00000017326	cstf2	98	81.323	Gasterosteus_aculeatus
ENSMZEG00005007200	cstf2	97	67.523	ENSGAGG00000006037	CSTF2	92	68.409	Gopherus_agassizii
ENSMZEG00005007200	cstf2	96	62.366	ENSGGOG00000022267	CSTF2	99	60.963	Gorilla_gorilla
ENSMZEG00005007200	cstf2	100	99.220	ENSHBUG00000016183	cstf2	96	99.220	Haplochromis_burtoni
ENSMZEG00005007200	cstf2	96	61.407	ENSHGLG00000000659	-	86	90.123	Heterocephalus_glaber_female
ENSMZEG00005007200	cstf2	96	61.407	ENSHGLG00100001130	-	86	90.123	Heterocephalus_glaber_male
ENSMZEG00005007200	cstf2	96	85.513	ENSHCOG00000005157	cstf2	97	85.294	Hippocampus_comes
ENSMZEG00005007200	cstf2	96	60.659	ENSSTOG00000023445	CSTF2	85	91.667	Ictidomys_tridecemlineatus
ENSMZEG00005007200	cstf2	96	61.063	ENSJJAG00000020507	Cstf2	85	91.667	Jaculus_jaculus
ENSMZEG00005007200	cstf2	100	85.513	ENSKMAG00000001068	cstf2	100	85.915	Kryptolebias_marmoratus
ENSMZEG00005007200	cstf2	69	92.405	ENSLBEG00000028720	cstf2	100	91.139	Labrus_bergylta
ENSMZEG00005007200	cstf2	97	61.046	ENSLACG00000015927	CSTF2	99	58.874	Latimeria_chalumnae
ENSMZEG00005007200	cstf2	96	85.075	ENSLOCG00000015300	cstf2	87	85.075	Lepisosteus_oculatus
ENSMZEG00005007200	cstf2	96	62.186	ENSMFAG00000043888	CSTF2	99	60.963	Macaca_fascicularis
ENSMZEG00005007200	cstf2	96	62.186	ENSMMUG00000013008	CSTF2	99	60.963	Macaca_mulatta
ENSMZEG00005007200	cstf2	96	62.186	ENSMNEG00000041824	CSTF2	99	60.963	Macaca_nemestrina
ENSMZEG00005007200	cstf2	96	62.186	ENSMLEG00000036870	CSTF2	99	60.963	Mandrillus_leucophaeus
ENSMZEG00005007200	cstf2	94	90.871	ENSMAMG00000020364	cstf2	96	89.419	Mastacembelus_armatus
ENSMZEG00005007200	cstf2	84	77.143	ENSMGAG00000004139	CSTF2	76	77.143	Meleagris_gallopavo
ENSMZEG00005007200	cstf2	96	59.138	ENSMAUG00000000965	Cstf2	66	83.333	Mesocricetus_auratus
ENSMZEG00005007200	cstf2	96	77.193	ENSMICG00000014121	CSTF2	62	83.058	Microcebus_murinus
ENSMZEG00005007200	cstf2	96	60.622	ENSMOCG00000008081	Cstf2	66	82.917	Microtus_ochrogaster
ENSMZEG00005007200	cstf2	100	76.275	ENSMMOG00000000538	cstf2	100	76.667	Mola_mola
ENSMZEG00005007200	cstf2	97	61.296	ENSMODG00000011785	CSTF2	99	59.899	Monodelphis_domestica
ENSMZEG00005007200	cstf2	95	79.336	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.903	Mus_caroli
ENSMZEG00005007200	cstf2	96	60.682	ENSMUSG00000031256	Cstf2	84	92.903	Mus_musculus
ENSMZEG00005007200	cstf2	95	79.336	MGP_PahariEiJ_G0031923	Cstf2	66	83.884	Mus_pahari
ENSMZEG00005007200	cstf2	96	77.061	MGP_SPRETEiJ_G0034548	Cstf2	84	92.903	Mus_spretus
ENSMZEG00005007200	cstf2	96	78.229	ENSMPUG00000002339	CSTF2	61	83.058	Mustela_putorius_furo
ENSMZEG00005007200	cstf2	94	79.457	ENSMLUG00000004598	CSTF2	60	82.377	Myotis_lucifugus
ENSMZEG00005007200	cstf2	96	59.966	ENSNGAG00000021985	Cstf2	63	83.058	Nannospalax_galili
ENSMZEG00005007200	cstf2	93	90.526	ENSNBRG00000021694	cstf2	100	90.526	Neolamprologus_brichardi
ENSMZEG00005007200	cstf2	96	62.186	ENSNLEG00000007510	CSTF2	99	60.963	Nomascus_leucogenys
ENSMZEG00005007200	cstf2	87	61.420	ENSMEUG00000014025	-	100	62.035	Notamacropus_eugenii
ENSMZEG00005007200	cstf2	97	63.269	ENSMEUG00000011186	-	99	64.528	Notamacropus_eugenii
ENSMZEG00005007200	cstf2	97	62.478	ENSMEUG00000007875	-	99	62.745	Notamacropus_eugenii
ENSMZEG00005007200	cstf2	82	77.835	ENSOPRG00000003106	CSTF2	77	77.835	Ochotona_princeps
ENSMZEG00005007200	cstf2	96	61.473	ENSODEG00000002059	CSTF2	99	58.763	Octodon_degus
ENSMZEG00005007200	cstf2	97	96.364	ENSONIG00000002631	cstf2	86	96.364	Oreochromis_niloticus
ENSMZEG00005007200	cstf2	85	82.692	ENSOANG00000004208	CSTF2	72	84.483	Ornithorhynchus_anatinus
ENSMZEG00005007200	cstf2	96	60.413	ENSOCUG00000010468	CSTF2	81	59.565	Oryctolagus_cuniculus
ENSMZEG00005007200	cstf2	96	86.526	ENSORLG00000001380	cstf2	100	84.818	Oryzias_latipes
ENSMZEG00005007200	cstf2	96	86.105	ENSORLG00020021917	cstf2	100	84.818	Oryzias_latipes_hni
ENSMZEG00005007200	cstf2	96	86.526	ENSORLG00015011996	cstf2	100	84.818	Oryzias_latipes_hsok
ENSMZEG00005007200	cstf2	100	87.621	ENSOMEG00000015507	cstf2	100	86.694	Oryzias_melastigma
ENSMZEG00005007200	cstf2	95	78.067	ENSOGAG00000011192	CSTF2	61	82.917	Otolemur_garnettii
ENSMZEG00005007200	cstf2	96	61.313	ENSOARG00000001022	CSTF2	64	82.645	Ovis_aries
ENSMZEG00005007200	cstf2	96	62.366	ENSPPAG00000031804	CSTF2	99	60.963	Pan_paniscus
ENSMZEG00005007200	cstf2	96	62.366	ENSPTRG00000022090	CSTF2	99	60.963	Pan_troglodytes
ENSMZEG00005007200	cstf2	95	78.229	ENSPANG00000002303	CSTF2	99	60.963	Papio_anubis
ENSMZEG00005007200	cstf2	98	72.584	ENSPKIG00000005033	cstf2	93	73.374	Paramormyrops_kingsleyae
ENSMZEG00005007200	cstf2	96	88.584	ENSPMGG00000006534	cstf2	100	87.424	Periophthalmus_magnuspinnatus
ENSMZEG00005007200	cstf2	96	59.348	ENSPEMG00000019415	Cstf2	66	83.333	Peromyscus_maniculatus_bairdii
ENSMZEG00005007200	cstf2	94	61.364	ENSPCIG00000002989	CSTF2	99	59.432	Phascolarctos_cinereus
ENSMZEG00005007200	cstf2	96	83.845	ENSPLAG00000011176	cstf2	100	85.069	Poecilia_latipinna
ENSMZEG00005007200	cstf2	96	84.221	ENSPMEG00000017743	cstf2	100	85.039	Poecilia_mexicana
ENSMZEG00005007200	cstf2	65	89.759	ENSPREG00000011481	cstf2	100	78.533	Poecilia_reticulata
ENSMZEG00005007200	cstf2	94	49.561	ENSPVAG00000008342	CSTF2	90	56.769	Pteropus_vampyrus
ENSMZEG00005007200	cstf2	100	91.813	ENSPNYG00000010852	cstf2	100	94.565	Pundamilia_nyererei
ENSMZEG00005007200	cstf2	96	60.862	ENSRNOG00000048025	Cstf2	87	83.884	Rattus_norvegicus
ENSMZEG00005007200	cstf2	96	62.342	ENSRBIG00000030745	CSTF2	99	61.111	Rhinopithecus_bieti
ENSMZEG00005007200	cstf2	96	62.186	ENSRROG00000045042	CSTF2	99	60.963	Rhinopithecus_roxellana
ENSMZEG00005007200	cstf2	95	78.229	ENSSBOG00000021649	CSTF2	99	58.478	Saimiri_boliviensis_boliviensis
ENSMZEG00005007200	cstf2	86	84.615	ENSSHAG00000003681	CSTF2	73	86.207	Sarcophilus_harrisii
ENSMZEG00005007200	cstf2	96	74.566	ENSSFOG00015006348	cstf2	97	72.921	Scleropages_formosus
ENSMZEG00005007200	cstf2	100	85.938	ENSSMAG00000013463	cstf2	100	87.891	Scophthalmus_maximus
ENSMZEG00005007200	cstf2	97	61.702	ENSSPUG00000005288	-	52	84.362	Sphenodon_punctatus
ENSMZEG00005007200	cstf2	96	62.173	ENSSSCG00000012486	CSTF2	52	82.645	Sus_scrofa
ENSMZEG00005007200	cstf2	97	58.638	ENSTGUG00000002253	CSTF2	87	83.534	Taeniopygia_guttata
ENSMZEG00005007200	cstf2	97	81.460	ENSTNIG00000016860	cstf2	99	82.400	Tetraodon_nigroviridis
ENSMZEG00005007200	cstf2	96	78.229	ENSUAMG00000026605	CSTF2	94	65.707	Ursus_americanus
ENSMZEG00005007200	cstf2	97	76.812	ENSUMAG00000012417	CSTF2	90	82.645	Ursus_maritimus
ENSMZEG00005007200	cstf2	75	71.217	ENSVPAG00000006466	CSTF2	54	81.405	Vicugna_pacos
ENSMZEG00005007200	cstf2	88	79.104	ENSXETG00000009642	cstf2	85	86.207	Xenopus_tropicalis
ENSMZEG00005007200	cstf2	74	98.485	ENSXCOG00000016436	cstf2	100	94.118	Xiphophorus_couchianus
ENSMZEG00005007200	cstf2	65	88.855	ENSXMAG00000013524	cstf2	100	80.863	Xiphophorus_maculatus