EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005007313 (Gene tree)
Gene ID
101483106
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
17609 bases
Position
chrLG16:19048950-19066558
Accession
101483106
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005009692RRM_1PF00076.226.2e-3112
ENSMZEP00005009692RRM_1PF00076.226.2e-3122
ENSMZEP00005009677RRM_1PF00076.227.3e-3112
ENSMZEP00005009677RRM_1PF00076.227.3e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005010052RBMS1 (1 of many)-2021023-ENSMZEP00005009692340 (aa)--
ENSMZET00005010036RBMS1 (1 of many)-2014096XM_004557640ENSMZEP00005009677357 (aa)XP_004557697-
Gene Model
Click here to download ENSMZEG00005007313's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007313's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005007313RBMS19178.593ENSG00000153250RBMS18489.720Homo_sapiens
ENSMZEG00005007313RBMS19468.546ENSAPOG00000013761rbms1a8966.667Acanthochromis_polyacanthus
ENSMZEG00005007313RBMS19190.184ENSAPOG00000024437-8290.184Acanthochromis_polyacanthus
ENSMZEG00005007313RBMS19176.737ENSAMEG00000012661RBMS18676.807Ailuropoda_melanoleuca
ENSMZEG00005007313RBMS18466.113ENSACIG00000000113rbms1a8266.780Amphilophus_citrinellus
ENSMZEG00005007313RBMS19293.333ENSACIG00000021498RBMS18493.333Amphilophus_citrinellus
ENSMZEG00005007313RBMS19069.470ENSAOCG00000010066rbms1a8966.667Amphiprion_ocellaris
ENSMZEG00005007313RBMS19190.491ENSAOCG00000014482-8390.491Amphiprion_ocellaris
ENSMZEG00005007313RBMS19189.877ENSAPEG00000018371-8389.877Amphiprion_percula
ENSMZEG00005007313RBMS19468.546ENSAPEG00000023563rbms1a8966.667Amphiprion_percula
ENSMZEG00005007313RBMS19782.659ENSATEG00000018573RBMS18487.273Anabas_testudineus
ENSMZEG00005007313RBMS19865.089ENSATEG00000015450rbms1a8965.839Anabas_testudineus
ENSMZEG00005007313RBMS19179.205ENSAPLG00000007282RBMS18278.963Anas_platyrhynchos
ENSMZEG00005007313RBMS19778.857ENSACAG00000011984RBMS16879.268Anolis_carolinensis
ENSMZEG00005007313RBMS18377.778ENSANAG00000024424RBMS19277.778Aotus_nancymaae
ENSMZEG00005007313RBMS19068.536ENSACLG00000021512rbms1a8965.782Astatotilapia_calliptera
ENSMZEG00005007313RBMS110099.440ENSACLG00000013048RBMS19399.440Astatotilapia_calliptera
ENSMZEG00005007313RBMS19175.692ENSAMXG00000002146rbms1a9170.978Astyanax_mexicanus
ENSMZEG00005007313RBMS19480.655ENSAMXG00000009969RBMS18681.905Astyanax_mexicanus
ENSMZEG00005007313RBMS19178.899ENSBTAG00000005180RBMS18178.963Bos_taurus
ENSMZEG00005007313RBMS19775.862ENSCJAG00000012871-8675.610Callithrix_jacchus
ENSMZEG00005007313RBMS19178.593ENSCJAG00000014861-8378.049Callithrix_jacchus
ENSMZEG00005007313RBMS19672.093ENSCJAG00000022465-8872.256Callithrix_jacchus
ENSMZEG00005007313RBMS19178.593ENSCAFG00000009922RBMS18178.659Canis_familiaris
ENSMZEG00005007313RBMS19177.982ENSCAFG00020006120RBMS18178.049Canis_lupus_dingo
ENSMZEG00005007313RBMS19178.287ENSCHIG00000023380RBMS18178.354Capra_hircus
ENSMZEG00005007313RBMS19178.593ENSTSYG00000005584RBMS18877.744Carlito_syrichta
ENSMZEG00005007313RBMS19178.287ENSCPOG00000012310RBMS18773.837Cavia_porcellus
ENSMZEG00005007313RBMS19178.593ENSCCAG00000033841RBMS18578.354Cebus_capucinus
ENSMZEG00005007313RBMS19178.593ENSCATG00000043032RBMS18877.744Cercocebus_atys
ENSMZEG00005007313RBMS19178.287ENSCLAG00000003031RBMS18873.837Chinchilla_lanigera
ENSMZEG00005007313RBMS19178.593ENSCSAG00000015687RBMS18178.354Chlorocebus_sabaeus
ENSMZEG00005007313RBMS19181.040ENSCPBG00000026455RBMS18280.793Chrysemys_picta_bellii
ENSMZEG00005007313RBMS19178.593ENSCANG00000042152RBMS18877.744Colobus_angolensis_palliatus
ENSMZEG00005007313RBMS19177.676ENSCGRG00001022833Rbms18177.439Cricetulus_griseus_chok1gshd
ENSMZEG00005007313RBMS19177.676ENSCGRG00000008824Rbms18773.837Cricetulus_griseus_crigri
ENSMZEG00005007313RBMS19267.976ENSCSEG00000000889rbms1a8368.889Cynoglossus_semilaevis
ENSMZEG00005007313RBMS19883.239ENSCSEG00000010652RBMS18884.356Cynoglossus_semilaevis
ENSMZEG00005007313RBMS19467.359ENSCVAG00000014698rbms1a8467.913Cyprinodon_variegatus
ENSMZEG00005007313RBMS19784.682ENSCVAG00000002027RBMS19086.503Cyprinodon_variegatus
ENSMZEG00005007313RBMS19175.692ENSDARG00000074023rbms1a8175.692Danio_rerio
ENSMZEG00005007313RBMS19174.927ENSDNOG00000040691RBMS18874.709Dasypus_novemcinctus
ENSMZEG00005007313RBMS19178.593ENSDORG00000007103Rbms18874.128Dipodomys_ordii
ENSMZEG00005007313RBMS19166.972ENSETEG00000012135RBMS18667.073Echinops_telfairi
ENSMZEG00005007313RBMS19177.982ENSEASG00005023132RBMS18178.049Equus_asinus_asinus
ENSMZEG00005007313RBMS19177.982ENSECAG00000019894RBMS18177.744Equus_caballus
ENSMZEG00005007313RBMS16889.796ENSEEUG00000005628RBMS16088.000Erinaceus_europaeus
ENSMZEG00005007313RBMS19172.086ENSELUG00000019328RBMS18072.086Esox_lucius
ENSMZEG00005007313RBMS19468.935ENSELUG00000018923rbms1a8870.533Esox_lucius
ENSMZEG00005007313RBMS19178.287ENSFCAG00000012524RBMS18877.439Felis_catus
ENSMZEG00005007313RBMS19179.511ENSFALG00000004440RBMS18879.268Ficedula_albicollis
ENSMZEG00005007313RBMS19178.593ENSFDAG00000015692RBMS18774.419Fukomys_damarensis
ENSMZEG00005007313RBMS19467.656ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSMZEG00005007313RBMS19187.781ENSFHEG00000000720RBMS18388.065Fundulus_heteroclitus
ENSMZEG00005007313RBMS18866.258ENSGMOG00000000525rbms1a9661.272Gadus_morhua
ENSMZEG00005007313RBMS19180.122ENSGALG00000011132RBMS18879.878Gallus_gallus
ENSMZEG00005007313RBMS19467.656ENSGAFG00000011633rbms1a8968.536Gambusia_affinis
ENSMZEG00005007313RBMS19187.423ENSGAFG00000007708RBMS18287.692Gambusia_affinis
ENSMZEG00005007313RBMS19285.455ENSGACG00000005671RBMS18485.455Gasterosteus_aculeatus
ENSMZEG00005007313RBMS19168.308ENSGACG00000015174rbms1a9168.308Gasterosteus_aculeatus
ENSMZEG00005007313RBMS19781.034ENSGAGG00000007866RBMS18280.793Gopherus_agassizii
ENSMZEG00005007313RBMS19178.593ENSGGOG00000001264RBMS18877.744Gorilla_gorilla
ENSMZEG00005007313RBMS19176.453ENSGGOG00000043756-8176.524Gorilla_gorilla
ENSMZEG00005007313RBMS19999.435ENSHBUG00000004516RBMS110099.435Haplochromis_burtoni
ENSMZEG00005007313RBMS19068.536ENSHBUG00000004802rbms1a8965.782Haplochromis_burtoni
ENSMZEG00005007313RBMS19178.287ENSHGLG00000010387RBMS18378.354Heterocephalus_glaber_female
ENSMZEG00005007313RBMS19178.287ENSHGLG00100014105RBMS18773.837Heterocephalus_glaber_male
ENSMZEG00005007313RBMS19183.951ENSHCOG00000016668RBMS18283.951Hippocampus_comes
ENSMZEG00005007313RBMS19469.139ENSHCOG00000020097rbms1a8966.962Hippocampus_comes
ENSMZEG00005007313RBMS19176.000ENSIPUG00000010131RBMS18276.000Ictalurus_punctatus
ENSMZEG00005007313RBMS19681.633ENSIPUG00000014677RBMS18281.115Ictalurus_punctatus
ENSMZEG00005007313RBMS19178.593ENSSTOG00000012501RBMS18774.128Ictidomys_tridecemlineatus
ENSMZEG00005007313RBMS19177.370ENSJJAG00000016543Rbms18873.547Jaculus_jaculus
ENSMZEG00005007313RBMS19466.766ENSKMAG00000011839-8467.601Kryptolebias_marmoratus
ENSMZEG00005007313RBMS19186.810ENSKMAG00000013911RBMS18286.810Kryptolebias_marmoratus
ENSMZEG00005007313RBMS19286.970ENSLBEG00000005787RBMS18486.970Labrus_bergylta
ENSMZEG00005007313RBMS19467.953ENSLBEG00000025962rbms1a8966.077Labrus_bergylta
ENSMZEG00005007313RBMS19975.487ENSLACG00000004324RBMS19467.766Latimeria_chalumnae
ENSMZEG00005007313RBMS19182.209ENSLOCG00000008622rbms1a8382.209Lepisosteus_oculatus
ENSMZEG00005007313RBMS19177.370ENSLAFG00000017217RBMS18677.134Loxodonta_africana
ENSMZEG00005007313RBMS19178.593ENSMFAG00000000274RBMS18877.744Macaca_fascicularis
ENSMZEG00005007313RBMS19178.593ENSMMUG00000016825RBMS18578.659Macaca_mulatta
ENSMZEG00005007313RBMS19178.593ENSMNEG00000039425RBMS18877.744Macaca_nemestrina
ENSMZEG00005007313RBMS19178.287ENSMLEG00000031517RBMS18877.439Mandrillus_leucophaeus
ENSMZEG00005007313RBMS19863.944ENSMAMG00000005018rbms1a8964.602Mastacembelus_armatus
ENSMZEG00005007313RBMS19286.364ENSMAMG00000003159-8786.364Mastacembelus_armatus
ENSMZEG00005007313RBMS19068.536ENSMZEG00005005661rbms1a8965.782Maylandia_zebra
ENSMZEG00005007313RBMS19180.122ENSMGAG00000011054RBMS19279.276Meleagris_gallopavo
ENSMZEG00005007313RBMS19177.064ENSMAUG00000008550Rbms18177.134Mesocricetus_auratus
ENSMZEG00005007313RBMS19177.982ENSMICG00000008325RBMS18677.744Microcebus_murinus
ENSMZEG00005007313RBMS19177.064ENSMOCG00000022617Rbms18972.414Microtus_ochrogaster
ENSMZEG00005007313RBMS19187.423ENSMMOG00000003707RBMS18387.423Mola_mola
ENSMZEG00005007313RBMS18370.470ENSMMOG00000018249rbms1a8170.470Mola_mola
ENSMZEG00005007313RBMS19178.899ENSMODG00000005250RBMS18178.659Monodelphis_domestica
ENSMZEG00005007313RBMS19368.072ENSMALG00000014235rbms1a8965.487Monopterus_albus
ENSMZEG00005007313RBMS19187.730ENSMALG00000015715-8487.730Monopterus_albus
ENSMZEG00005007313RBMS19177.982MGP_CAROLIEiJ_G0023586Rbms18874.419Mus_caroli
ENSMZEG00005007313RBMS19177.982ENSMUSG00000026970Rbms18874.128Mus_musculus
ENSMZEG00005007313RBMS19177.676MGP_PahariEiJ_G0025037Rbms18177.744Mus_pahari
ENSMZEG00005007313RBMS19178.287MGP_SPRETEiJ_G0024508Rbms17389.630Mus_spretus
ENSMZEG00005007313RBMS19174.344ENSMPUG00000000539RBMS18174.128Mustela_putorius_furo
ENSMZEG00005007313RBMS19173.623ENSMLUG00000008762RBMS18273.410Myotis_lucifugus
ENSMZEG00005007313RBMS19177.370ENSNGAG00000013636Rbms18177.439Nannospalax_galili
ENSMZEG00005007313RBMS19798.784ENSNBRG00000015151RBMS19398.784Neolamprologus_brichardi
ENSMZEG00005007313RBMS18469.435ENSNBRG00000020217rbms1a8569.435Neolamprologus_brichardi
ENSMZEG00005007313RBMS19178.593ENSNLEG00000001667RBMS18877.744Nomascus_leucogenys
ENSMZEG00005007313RBMS18365.657ENSMEUG00000000746RBMS19265.657Notamacropus_eugenii
ENSMZEG00005007313RBMS19170.948ENSOPRG00000012431RBMS18171.037Ochotona_princeps
ENSMZEG00005007313RBMS19177.676ENSODEG00000013934RBMS18873.837Octodon_degus
ENSMZEG00005007313RBMS19896.571ENSONIG00000008934RBMS18996.571Oreochromis_niloticus
ENSMZEG00005007313RBMS19068.111ENSONIG00000003329rbms1a8368.111Oreochromis_niloticus
ENSMZEG00005007313RBMS16351.440ENSOANG00000004477-9952.459Ornithorhynchus_anatinus
ENSMZEG00005007313RBMS19180.428ENSOANG00000006166RBMS18380.183Ornithorhynchus_anatinus
ENSMZEG00005007313RBMS19177.982ENSOCUG00000017365RBMS17777.744Oryctolagus_cuniculus
ENSMZEG00005007313RBMS19182.515ENSORLG00000016818RBMS18382.515Oryzias_latipes
ENSMZEG00005007313RBMS19366.066ENSORLG00000003917rbms1a9063.529Oryzias_latipes
ENSMZEG00005007313RBMS19181.957ENSORLG00020022335RBMS18382.209Oryzias_latipes_hni
ENSMZEG00005007313RBMS19365.361ENSORLG00020018663rbms1a9062.832Oryzias_latipes_hni
ENSMZEG00005007313RBMS19182.569ENSORLG00015018208RBMS18382.822Oryzias_latipes_hsok
ENSMZEG00005007313RBMS19365.663ENSORLG00015016556rbms1a9063.127Oryzias_latipes_hsok
ENSMZEG00005007313RBMS19183.436ENSOMEG00000002394RBMS18283.692Oryzias_melastigma
ENSMZEG00005007313RBMS19177.508ENSOGAG00000002900RBMS18877.273Otolemur_garnettii
ENSMZEG00005007313RBMS19178.287ENSOARG00000006870RBMS18873.988Ovis_aries
ENSMZEG00005007313RBMS19178.593ENSPPAG00000040083RBMS18678.659Pan_paniscus
ENSMZEG00005007313RBMS19174.924ENSPPAG00000036520-8674.695Pan_paniscus
ENSMZEG00005007313RBMS19178.287ENSPPRG00000005040RBMS18877.439Panthera_pardus
ENSMZEG00005007313RBMS19178.287ENSPTIG00000021240RBMS18877.439Panthera_tigris_altaica
ENSMZEG00005007313RBMS19175.535ENSPTRG00000039358-9270.938Pan_troglodytes
ENSMZEG00005007313RBMS19178.593ENSPTRG00000052304RBMS18678.659Pan_troglodytes
ENSMZEG00005007313RBMS19178.593ENSPANG00000001383RBMS18578.659Papio_anubis
ENSMZEG00005007313RBMS19277.982ENSPKIG00000012818rbms1a8377.914Paramormyrops_kingsleyae
ENSMZEG00005007313RBMS19978.151ENSPKIG00000001498rbms1a8577.976Paramormyrops_kingsleyae
ENSMZEG00005007313RBMS19180.122ENSPSIG00000010240RBMS18179.878Pelodiscus_sinensis
ENSMZEG00005007313RBMS19383.384ENSPMGG00000006310RBMS19771.373Periophthalmus_magnuspinnatus
ENSMZEG00005007313RBMS18369.463ENSPMGG00000004341rbms1a8069.463Periophthalmus_magnuspinnatus
ENSMZEG00005007313RBMS19177.982ENSPEMG00000009449Rbms18377.744Peromyscus_maniculatus_bairdii
ENSMZEG00005007313RBMS19178.899ENSPCIG00000018405RBMS18178.659Phascolarctos_cinereus
ENSMZEG00005007313RBMS19467.656ENSPFOG00000016116rbms1a8468.536Poecilia_formosa
ENSMZEG00005007313RBMS19187.117ENSPFOG00000017483RBMS18287.385Poecilia_formosa
ENSMZEG00005007313RBMS19467.656ENSPLAG00000013864rbms1a8468.536Poecilia_latipinna
ENSMZEG00005007313RBMS19187.423ENSPLAG00000000920RBMS18387.423Poecilia_latipinna
ENSMZEG00005007313RBMS19467.656ENSPMEG00000016185rbms1a8468.536Poecilia_mexicana
ENSMZEG00005007313RBMS19187.117ENSPMEG00000015838RBMS18287.385Poecilia_mexicana
ENSMZEG00005007313RBMS19187.730ENSPREG00000008146RBMS18287.730Poecilia_reticulata
ENSMZEG00005007313RBMS19467.656ENSPREG00000020161rbms1a8468.536Poecilia_reticulata
ENSMZEG00005007313RBMS19174.636ENSPPYG00000012879-8274.419Pongo_abelii
ENSMZEG00005007313RBMS18379.667ENSPCAG00000009673RBMS17479.402Procavia_capensis
ENSMZEG00005007313RBMS19177.982ENSPCOG00000027294RBMS18877.134Propithecus_coquereli
ENSMZEG00005007313RBMS19166.361ENSPVAG00000010429RBMS18166.159Pteropus_vampyrus
ENSMZEG00005007313RBMS110099.412ENSPNYG00000002643RBMS110099.412Pundamilia_nyererei
ENSMZEG00005007313RBMS19681.105ENSPNAG00000023479RBMS18282.353Pygocentrus_nattereri
ENSMZEG00005007313RBMS19176.308ENSPNAG00000010225rbms1a8276.308Pygocentrus_nattereri
ENSMZEG00005007313RBMS19178.287ENSRNOG00000008482Rbms18574.709Rattus_norvegicus
ENSMZEG00005007313RBMS19178.287ENSRBIG00000044262RBMS18578.116Rhinopithecus_bieti
ENSMZEG00005007313RBMS19178.593ENSRROG00000043108RBMS18578.659Rhinopithecus_roxellana
ENSMZEG00005007313RBMS19178.593ENSSBOG00000034705RBMS18878.354Saimiri_boliviensis_boliviensis
ENSMZEG00005007313RBMS19178.593ENSSHAG00000012271RBMS19373.125Sarcophilus_harrisii
ENSMZEG00005007313RBMS19179.077ENSSFOG00015014493rbms1a8881.940Scleropages_formosus
ENSMZEG00005007313RBMS19181.902ENSSFOG00015022929rbms18281.902Scleropages_formosus
ENSMZEG00005007313RBMS19286.850ENSSMAG00000012152RBMS18886.850Scophthalmus_maximus
ENSMZEG00005007313RBMS18869.620ENSSMAG00000012722rbms1a9466.077Scophthalmus_maximus
ENSMZEG00005007313RBMS19369.277ENSSDUG00000020602rbms1a9466.667Seriola_dumerili
ENSMZEG00005007313RBMS19288.485ENSSDUG00000018803RBMS18488.485Seriola_dumerili
ENSMZEG00005007313RBMS19190.032ENSSLDG00000016556RBMS19190.032Seriola_lalandi_dorsalis
ENSMZEG00005007313RBMS19369.277ENSSLDG00000009495rbms1a8966.667Seriola_lalandi_dorsalis
ENSMZEG00005007313RBMS16974.747ENSSARG00000011085RBMS15874.372Sorex_araneus
ENSMZEG00005007313RBMS19180.734ENSSPUG00000017163RBMS18880.488Sphenodon_punctatus
ENSMZEG00005007313RBMS19289.394ENSSPAG00000000059RBMS18489.394Stegastes_partitus
ENSMZEG00005007313RBMS19468.249ENSSPAG00000005371rbms1a8966.372Stegastes_partitus
ENSMZEG00005007313RBMS19178.354ENSSSCG00000015888RBMS18278.419Sus_scrofa
ENSMZEG00005007313RBMS19179.511ENSTGUG00000006606RBMS18179.268Taeniopygia_guttata
ENSMZEG00005007313RBMS19284.756ENSTRUG00000005466-8284.663Takifugu_rubripes
ENSMZEG00005007313RBMS19068.944ENSTRUG00000017155rbms1a8468.827Takifugu_rubripes
ENSMZEG00005007313RBMS19782.081ENSTNIG00000016496RBMS19084.923Tetraodon_nigroviridis
ENSMZEG00005007313RBMS19764.841ENSTNIG00000009477rbms1a10068.065Tetraodon_nigroviridis
ENSMZEG00005007313RBMS19169.113ENSTBEG00000016156RBMS18668.902Tupaia_belangeri
ENSMZEG00005007313RBMS19178.287ENSTTRG00000011058RBMS18678.354Tursiops_truncatus
ENSMZEG00005007313RBMS19177.676ENSUAMG00000022331RBMS18177.744Ursus_americanus
ENSMZEG00005007313RBMS19177.676ENSUMAG00000008605RBMS18477.744Ursus_maritimus
ENSMZEG00005007313RBMS19179.205ENSVPAG00000002716RBMS18779.268Vicugna_pacos
ENSMZEG00005007313RBMS19177.982ENSVVUG00000018682RBMS18877.744Vulpes_vulpes
ENSMZEG00005007313RBMS19772.779ENSXETG00000016204rbms18973.414Xenopus_tropicalis
ENSMZEG00005007313RBMS18967.925ENSXCOG00000001659rbms1a8368.874Xiphophorus_couchianus
ENSMZEG00005007313RBMS19186.810ENSXCOG00000000211RBMS18986.810Xiphophorus_couchianus
ENSMZEG00005007313RBMS19187.117ENSXMAG00000011405RBMS18883.129Xiphophorus_maculatus
ENSMZEG00005007313RBMS19467.656ENSXMAG00000001802rbms1a8468.536Xiphophorus_maculatus

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