EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007319 (Gene tree)
Gene ID: 101471255
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 30089 bases
Position: chrLG5:32707631-32737719
Accession: 101471255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009737	R3H	PF01424.22	9.7e-11	1	1
ENSMZEP00005009656	R3H	PF01424.22	1e-10	1	1
ENSMZEP00005009678	R3H	PF01424.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010097	-	5382	XM_012918169	ENSMZEP00005009737	1038 (aa)	XP_012773623	UPI000C24BDDA
ENSMZET00005010015	-	5481	XM_004547682	ENSMZEP00005009656	1071 (aa)	XP_004547739	UPI000647993F
ENSMZET00005010037	-	5427	XM_012918166	ENSMZEP00005009678	1053 (aa)	XP_012773620	UPI000C241126

Gene Model

Click here to download ENSMZEG00005007319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007319	r3hdm2	99	65.521	ENSG00000179912	R3HDM2	96	69.637	Homo_sapiens
ENSMZEG00005007319	r3hdm2	56	37.778	ENSAPOG00000021873	-	70	41.326	Acanthochromis_polyacanthus
ENSMZEG00005007319	r3hdm2	100	97.395	ENSAPOG00000020341	r3hdm2	100	97.395	Acanthochromis_polyacanthus
ENSMZEG00005007319	r3hdm2	95	67.500	ENSAMEG00000004812	R3HDM2	99	64.927	Ailuropoda_melanoleuca
ENSMZEG00005007319	r3hdm2	94	89.815	ENSACIG00000016146	r3hdm2	98	89.815	Amphilophus_citrinellus
ENSMZEG00005007319	r3hdm2	100	97.302	ENSAOCG00000023694	r3hdm2	100	97.302	Amphiprion_ocellaris
ENSMZEG00005007319	r3hdm2	100	97.067	ENSAPEG00000008851	r3hdm2	100	97.067	Amphiprion_percula
ENSMZEG00005007319	r3hdm2	100	93.097	ENSATEG00000025024	r3hdm2	100	92.522	Anabas_testudineus
ENSMZEG00005007319	r3hdm2	100	55.980	ENSAPLG00000004298	R3HDM2	99	59.383	Anas_platyrhynchos
ENSMZEG00005007319	r3hdm2	99	62.698	ENSACAG00000006388	R3HDM2	99	60.558	Anolis_carolinensis
ENSMZEG00005007319	r3hdm2	99	65.425	ENSANAG00000025397	-	99	64.088	Aotus_nancymaae
ENSMZEG00005007319	r3hdm2	97	62.952	ENSANAG00000031310	-	98	60.580	Aotus_nancymaae
ENSMZEG00005007319	r3hdm2	100	100.000	ENSACLG00000019106	r3hdm2	100	100.000	Astatotilapia_calliptera
ENSMZEG00005007319	r3hdm2	95	69.889	ENSAMXG00000017180	r3hdm2	99	72.044	Astyanax_mexicanus
ENSMZEG00005007319	r3hdm2	96	66.534	ENSBTAG00000018361	R3HDM2	99	63.403	Bos_taurus
ENSMZEG00005007319	r3hdm2	99	64.605	ENSCJAG00000007365	R3HDM2	99	63.897	Callithrix_jacchus
ENSMZEG00005007319	r3hdm2	95	66.468	ENSCAFG00000000215	R3HDM2	99	63.223	Canis_familiaris
ENSMZEG00005007319	r3hdm2	95	67.502	ENSCAFG00020023713	R3HDM2	99	64.581	Canis_lupus_dingo
ENSMZEG00005007319	r3hdm2	95	67.792	ENSCHIG00000014022	R3HDM2	99	65.133	Capra_hircus
ENSMZEG00005007319	r3hdm2	99	64.723	ENSTSYG00000001449	R3HDM2	99	62.830	Carlito_syrichta
ENSMZEG00005007319	r3hdm2	99	66.821	ENSCPOG00000009217	R3HDM2	99	64.384	Cavia_porcellus
ENSMZEG00005007319	r3hdm2	87	66.194	ENSCCAG00000026083	R3HDM2	99	65.389	Cebus_capucinus
ENSMZEG00005007319	r3hdm2	99	66.142	ENSCATG00000036929	R3HDM2	99	65.342	Cercocebus_atys
ENSMZEG00005007319	r3hdm2	95	68.527	ENSCLAG00000011997	R3HDM2	99	65.293	Chinchilla_lanigera
ENSMZEG00005007319	r3hdm2	99	66.698	ENSCSAG00000004911	R3HDM2	99	65.572	Chlorocebus_sabaeus
ENSMZEG00005007319	r3hdm2	73	67.540	ENSCHOG00000005636	R3HDM2	89	68.209	Choloepus_hoffmanni
ENSMZEG00005007319	r3hdm2	95	65.851	ENSCPBG00000013922	R3HDM2	99	62.993	Chrysemys_picta_bellii
ENSMZEG00005007319	r3hdm2	99	65.501	ENSCANG00000043807	R3HDM2	99	65.157	Colobus_angolensis_palliatus
ENSMZEG00005007319	r3hdm2	99	64.587	ENSCGRG00001017324	R3hdm2	99	62.218	Cricetulus_griseus_chok1gshd
ENSMZEG00005007319	r3hdm2	99	64.587	ENSCGRG00000003862	R3hdm2	99	62.218	Cricetulus_griseus_crigri
ENSMZEG00005007319	r3hdm2	100	91.320	ENSCSEG00000010925	r3hdm2	99	92.490	Cynoglossus_semilaevis
ENSMZEG00005007319	r3hdm2	100	90.395	ENSCVAG00000009058	r3hdm2	100	90.038	Cyprinodon_variegatus
ENSMZEG00005007319	r3hdm2	94	73.433	ENSDARG00000102610	r3hdm2	99	74.453	Danio_rerio
ENSMZEG00005007319	r3hdm2	99	65.546	ENSDNOG00000015033	R3HDM2	100	65.664	Dasypus_novemcinctus
ENSMZEG00005007319	r3hdm2	95	63.781	ENSDORG00000011462	R3hdm2	99	63.121	Dipodomys_ordii
ENSMZEG00005007319	r3hdm2	96	68.073	ENSEASG00005007091	R3HDM2	99	65.409	Equus_asinus_asinus
ENSMZEG00005007319	r3hdm2	96	67.526	ENSECAG00000003157	R3HDM2	99	65.317	Equus_caballus
ENSMZEG00005007319	r3hdm2	100	80.215	ENSELUG00000015969	r3hdm2	100	79.857	Esox_lucius
ENSMZEG00005007319	r3hdm2	95	67.792	ENSFCAG00000000192	R3HDM2	98	65.279	Felis_catus
ENSMZEG00005007319	r3hdm2	80	63.968	ENSFALG00000000255	R3HDM2	99	60.324	Ficedula_albicollis
ENSMZEG00005007319	r3hdm2	95	67.723	ENSFDAG00000019385	R3HDM2	99	63.505	Fukomys_damarensis
ENSMZEG00005007319	r3hdm2	100	91.296	ENSFHEG00000016484	r3hdm2	100	90.943	Fundulus_heteroclitus
ENSMZEG00005007319	r3hdm2	95	82.927	ENSGMOG00000007961	r3hdm2	100	82.863	Gadus_morhua
ENSMZEG00005007319	r3hdm2	99	65.948	ENSGALG00000043736	R3HDM2	99	64.128	Gallus_gallus
ENSMZEG00005007319	r3hdm2	100	91.852	ENSGAFG00000013887	r3hdm2	100	91.405	Gambusia_affinis
ENSMZEG00005007319	r3hdm2	95	90.643	ENSGACG00000006442	r3hdm2	100	91.529	Gasterosteus_aculeatus
ENSMZEG00005007319	r3hdm2	95	65.569	ENSGAGG00000017797	R3HDM2	99	62.327	Gopherus_agassizii
ENSMZEG00005007319	r3hdm2	99	66.142	ENSGGOG00000015007	R3HDM2	99	65.342	Gorilla_gorilla
ENSMZEG00005007319	r3hdm2	95	68.401	ENSHGLG00000010434	-	99	65.170	Heterocephalus_glaber_female
ENSMZEG00005007319	r3hdm2	89	60.638	ENSHGLG00000010421	-	97	58.606	Heterocephalus_glaber_female
ENSMZEG00005007319	r3hdm2	95	68.304	ENSHGLG00100004183	-	99	65.078	Heterocephalus_glaber_male
ENSMZEG00005007319	r3hdm2	95	58.641	ENSHGLG00100018871	-	98	56.845	Heterocephalus_glaber_male
ENSMZEG00005007319	r3hdm2	100	87.782	ENSHCOG00000001142	r3hdm2	97	88.720	Hippocampus_comes
ENSMZEG00005007319	r3hdm2	100	76.427	ENSIPUG00000023873	r3hdm2	100	76.335	Ictalurus_punctatus
ENSMZEG00005007319	r3hdm2	99	61.678	ENSSTOG00000013424	R3HDM2	99	60.208	Ictidomys_tridecemlineatus
ENSMZEG00005007319	r3hdm2	99	65.746	ENSJJAG00000010001	R3hdm2	99	64.495	Jaculus_jaculus
ENSMZEG00005007319	r3hdm2	100	92.500	ENSKMAG00000012695	r3hdm2	97	92.778	Kryptolebias_marmoratus
ENSMZEG00005007319	r3hdm2	100	92.586	ENSLBEG00000013115	r3hdm2	96	93.049	Labrus_bergylta
ENSMZEG00005007319	r3hdm2	50	40.998	ENSLBEG00000002779	-	82	39.312	Labrus_bergylta
ENSMZEG00005007319	r3hdm2	95	67.408	ENSLACG00000019064	r3hdm2	100	65.800	Latimeria_chalumnae
ENSMZEG00005007319	r3hdm2	99	74.499	ENSLOCG00000005976	r3hdm2	99	73.830	Lepisosteus_oculatus
ENSMZEG00005007319	r3hdm2	99	66.481	ENSLAFG00000006510	R3HDM2	99	65.342	Loxodonta_africana
ENSMZEG00005007319	r3hdm2	99	66.142	ENSMFAG00000036385	R3HDM2	99	65.342	Macaca_fascicularis
ENSMZEG00005007319	r3hdm2	99	66.883	ENSMMUG00000021789	R3HDM2	99	66.081	Macaca_mulatta
ENSMZEG00005007319	r3hdm2	99	66.266	ENSMNEG00000025314	R3HDM2	99	65.342	Macaca_nemestrina
ENSMZEG00005007319	r3hdm2	99	66.235	ENSMLEG00000028915	R3HDM2	99	65.434	Mandrillus_leucophaeus
ENSMZEG00005007319	r3hdm2	100	94.625	ENSMAMG00000009793	r3hdm2	100	95.181	Mastacembelus_armatus
ENSMZEG00005007319	r3hdm2	55	38.474	ENSMAMG00000011755	-	73	40.039	Mastacembelus_armatus
ENSMZEG00005007319	r3hdm2	96	66.271	ENSMICG00000012389	R3HDM2	99	62.844	Microcebus_murinus
ENSMZEG00005007319	r3hdm2	99	64.948	ENSMOCG00000014425	R3hdm2	99	62.726	Microtus_ochrogaster
ENSMZEG00005007319	r3hdm2	95	86.350	ENSMMOG00000007448	r3hdm2	99	85.628	Mola_mola
ENSMZEG00005007319	r3hdm2	90	86.760	ENSMALG00000010211	r3hdm2	98	87.172	Monopterus_albus
ENSMZEG00005007319	r3hdm2	95	67.341	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.194	Mus_caroli
ENSMZEG00005007319	r3hdm2	99	65.777	ENSMUSG00000025404	R3hdm2	99	64.377	Mus_musculus
ENSMZEG00005007319	r3hdm2	95	67.599	MGP_PahariEiJ_G0031189	R3hdm2	99	64.528	Mus_pahari
ENSMZEG00005007319	r3hdm2	99	65.625	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.044	Mus_spretus
ENSMZEG00005007319	r3hdm2	93	67.787	ENSMPUG00000001818	R3HDM2	96	64.133	Mustela_putorius_furo
ENSMZEG00005007319	r3hdm2	99	66.482	ENSMLUG00000004980	R3HDM2	99	65.133	Myotis_lucifugus
ENSMZEG00005007319	r3hdm2	99	65.654	ENSNGAG00000018800	R3hdm2	99	64.895	Nannospalax_galili
ENSMZEG00005007319	r3hdm2	94	91.522	ENSNBRG00000004483	r3hdm2	100	91.522	Neolamprologus_brichardi
ENSMZEG00005007319	r3hdm2	99	66.174	ENSNLEG00000017351	R3HDM2	99	65.434	Nomascus_leucogenys
ENSMZEG00005007319	r3hdm2	99	57.895	ENSMEUG00000008588	R3HDM2	99	56.136	Notamacropus_eugenii
ENSMZEG00005007319	r3hdm2	99	59.696	ENSOPRG00000013670	R3HDM2	99	57.994	Ochotona_princeps
ENSMZEG00005007319	r3hdm2	100	95.476	ENSONIG00000005075	r3hdm2	100	95.476	Oreochromis_niloticus
ENSMZEG00005007319	r3hdm2	99	66.116	ENSOCUG00000013258	R3HDM2	99	64.442	Oryctolagus_cuniculus
ENSMZEG00005007319	r3hdm2	100	89.342	ENSORLG00000005502	r3hdm2	100	89.537	Oryzias_latipes
ENSMZEG00005007319	r3hdm2	51	35.948	ENSORLG00000011606	-	69	37.952	Oryzias_latipes
ENSMZEG00005007319	r3hdm2	100	89.350	ENSORLG00020017069	r3hdm2	100	89.548	Oryzias_latipes_hni
ENSMZEG00005007319	r3hdm2	100	89.444	ENSORLG00015012735	r3hdm2	100	89.642	Oryzias_latipes_hsok
ENSMZEG00005007319	r3hdm2	100	82.692	ENSOMEG00000018079	r3hdm2	99	82.788	Oryzias_melastigma
ENSMZEG00005007319	r3hdm2	96	57.270	ENSOGAG00000027966	-	99	55.909	Otolemur_garnettii
ENSMZEG00005007319	r3hdm2	96	65.302	ENSOGAG00000012055	R3HDM2	99	62.754	Otolemur_garnettii
ENSMZEG00005007319	r3hdm2	96	66.010	ENSOARG00000006929	R3HDM2	99	63.318	Ovis_aries
ENSMZEG00005007319	r3hdm2	99	66.327	ENSPPAG00000034395	R3HDM2	99	65.527	Pan_paniscus
ENSMZEG00005007319	r3hdm2	95	66.267	ENSPPRG00000009240	R3HDM2	99	63.515	Panthera_pardus
ENSMZEG00005007319	r3hdm2	95	66.267	ENSPTIG00000008752	R3HDM2	99	63.515	Panthera_tigris_altaica
ENSMZEG00005007319	r3hdm2	99	66.235	ENSPTRG00000046457	R3HDM2	99	65.434	Pan_troglodytes
ENSMZEG00005007319	r3hdm2	95	67.033	ENSPANG00000024002	R3HDM2	97	65.569	Papio_anubis
ENSMZEG00005007319	r3hdm2	100	79.661	ENSPKIG00000003171	r3hdm2	100	80.791	Paramormyrops_kingsleyae
ENSMZEG00005007319	r3hdm2	94	86.228	ENSPMGG00000007061	r3hdm2	99	84.908	Periophthalmus_magnuspinnatus
ENSMZEG00005007319	r3hdm2	99	65.253	ENSPEMG00000015964	R3hdm2	99	63.978	Peromyscus_maniculatus_bairdii
ENSMZEG00005007319	r3hdm2	99	64.313	ENSPCIG00000023841	R3HDM2	99	62.868	Phascolarctos_cinereus
ENSMZEG00005007319	r3hdm2	94	82.408	ENSPFOG00000006077	r3hdm2	98	82.126	Poecilia_formosa
ENSMZEG00005007319	r3hdm2	100	91.902	ENSPLAG00000002971	r3hdm2	100	91.541	Poecilia_latipinna
ENSMZEG00005007319	r3hdm2	100	91.902	ENSPMEG00000005330	r3hdm2	100	91.541	Poecilia_mexicana
ENSMZEG00005007319	r3hdm2	100	91.481	ENSPREG00000008424	r3hdm2	100	91.128	Poecilia_reticulata
ENSMZEG00005007319	r3hdm2	97	61.171	ENSPPYG00000004685	R3HDM2	80	60.117	Pongo_abelii
ENSMZEG00005007319	r3hdm2	88	81.295	ENSPCAG00000014642	R3HDM2	92	81.455	Procavia_capensis
ENSMZEG00005007319	r3hdm2	96	66.435	ENSPCOG00000013201	R3HDM2	99	63.308	Propithecus_coquereli
ENSMZEG00005007319	r3hdm2	99	66.543	ENSPVAG00000003967	R3HDM2	99	65.041	Pteropus_vampyrus
ENSMZEG00005007319	r3hdm2	94	89.217	ENSPNYG00000013479	r3hdm2	100	88.403	Pundamilia_nyererei
ENSMZEG00005007319	r3hdm2	100	75.678	ENSPNAG00000017473	r3hdm2	100	77.507	Pygocentrus_nattereri
ENSMZEG00005007319	r3hdm2	95	66.795	ENSRNOG00000007801	R3hdm2	99	64.029	Rattus_norvegicus
ENSMZEG00005007319	r3hdm2	99	63.419	ENSRBIG00000037403	R3HDM2	99	62.082	Rhinopithecus_bieti
ENSMZEG00005007319	r3hdm2	99	66.975	ENSRROG00000022271	R3HDM2	99	65.434	Rhinopithecus_roxellana
ENSMZEG00005007319	r3hdm2	99	64.924	ENSSBOG00000023547	R3HDM2	99	63.992	Saimiri_boliviensis_boliviensis
ENSMZEG00005007319	r3hdm2	99	64.114	ENSSHAG00000003511	R3HDM2	99	64.355	Sarcophilus_harrisii
ENSMZEG00005007319	r3hdm2	95	78.226	ENSSFOG00015011219	r3hdm2	99	77.117	Scleropages_formosus
ENSMZEG00005007319	r3hdm2	100	93.290	ENSSMAG00000012073	r3hdm2	100	92.086	Scophthalmus_maximus
ENSMZEG00005007319	r3hdm2	100	95.940	ENSSDUG00000019269	r3hdm2	100	95.940	Seriola_dumerili
ENSMZEG00005007319	r3hdm2	100	96.093	ENSSLDG00000005252	r3hdm2	100	96.093	Seriola_lalandi_dorsalis
ENSMZEG00005007319	r3hdm2	90	60.580	ENSSARG00000003958	R3HDM2	91	58.462	Sorex_araneus
ENSMZEG00005007319	r3hdm2	95	62.949	ENSSPUG00000014132	R3HDM2	99	58.867	Sphenodon_punctatus
ENSMZEG00005007319	r3hdm2	100	97.067	ENSSPAG00000022594	r3hdm2	100	97.067	Stegastes_partitus
ENSMZEG00005007319	r3hdm2	50	39.755	ENSSPAG00000016856	-	69	40.574	Stegastes_partitus
ENSMZEG00005007319	r3hdm2	96	66.304	ENSSSCG00000026498	R3HDM2	100	66.558	Sus_scrofa
ENSMZEG00005007319	r3hdm2	72	64.286	ENSTGUG00000015881	R3HDM2	99	62.245	Taeniopygia_guttata
ENSMZEG00005007319	r3hdm2	95	84.413	ENSTRUG00000015075	r3hdm2	99	83.182	Takifugu_rubripes
ENSMZEG00005007319	r3hdm2	92	96.369	ENSTNIG00000007057	r3hdm2	90	97.486	Tetraodon_nigroviridis
ENSMZEG00005007319	r3hdm2	79	63.123	ENSTBEG00000015967	R3HDM2	75	63.123	Tupaia_belangeri
ENSMZEG00005007319	r3hdm2	89	75.969	ENSTTRG00000013082	R3HDM2	87	70.346	Tursiops_truncatus
ENSMZEG00005007319	r3hdm2	95	67.812	ENSUAMG00000020913	R3HDM2	99	65.079	Ursus_americanus
ENSMZEG00005007319	r3hdm2	91	66.566	ENSUMAG00000019179	R3HDM2	99	63.673	Ursus_maritimus
ENSMZEG00005007319	r3hdm2	90	77.815	ENSVPAG00000008656	R3HDM2	89	80.743	Vicugna_pacos
ENSMZEG00005007319	r3hdm2	93	67.787	ENSVVUG00000018014	R3HDM2	95	64.847	Vulpes_vulpes
ENSMZEG00005007319	r3hdm2	99	62.454	ENSXETG00000017153	r3hdm2	99	61.843	Xenopus_tropicalis
ENSMZEG00005007319	r3hdm2	87	87.638	ENSXCOG00000013882	r3hdm2	100	85.683	Xiphophorus_couchianus
ENSMZEG00005007319	r3hdm2	100	91.759	ENSXMAG00000017978	r3hdm2	100	91.405	Xiphophorus_maculatus