EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007349 (Gene tree)
Gene ID: 101477717
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 7005 bases
Position: chrLG2:29620780-29627784
Accession: 101477717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009706	MTS	PF05175.14	7.1e-06	1	1
ENSMZEP00005009706	Met_10	PF02475.16	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010066	-	5926	XM_004545736	ENSMZEP00005009706	401 (aa)	XP_004545793	UPI000D3201E3

Gene Model

Click here to download ENSMZEG00005007349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007349	trmt12	96	49.637	ENSG00000183665	TRMT12	92	49.637	Homo_sapiens
ENSMZEG00005007349	trmt12	100	78.803	ENSAPOG00000011979	trmt12	100	78.803	Acanthochromis_polyacanthus
ENSMZEG00005007349	trmt12	96	50.239	ENSAMEG00000019612	TRMT12	92	50.239	Ailuropoda_melanoleuca
ENSMZEG00005007349	trmt12	96	85.117	ENSACIG00000012982	trmt12	100	85.117	Amphilophus_citrinellus
ENSMZEG00005007349	trmt12	100	80.299	ENSAOCG00000020570	trmt12	99	81.794	Amphiprion_ocellaris
ENSMZEG00005007349	trmt12	100	80.299	ENSAPEG00000006335	trmt12	99	81.794	Amphiprion_percula
ENSMZEG00005007349	trmt12	100	77.037	ENSATEG00000018316	trmt12	100	77.037	Anabas_testudineus
ENSMZEG00005007349	trmt12	100	98.753	ENSACLG00000001008	trmt12	100	98.753	Astatotilapia_calliptera
ENSMZEG00005007349	trmt12	99	56.667	ENSAMXG00000040366	trmt12	99	56.667	Astyanax_mexicanus
ENSMZEG00005007349	trmt12	96	49.515	ENSBTAG00000020398	TRMT12	89	49.515	Bos_taurus
ENSMZEG00005007349	trmt12	96	47.942	ENSCJAG00000022174	TRMT12	92	47.942	Callithrix_jacchus
ENSMZEG00005007349	trmt12	96	50.481	ENSCAFG00000001040	TRMT12	94	50.481	Canis_familiaris
ENSMZEG00005007349	trmt12	96	50.481	ENSCAFG00020006500	TRMT12	94	50.481	Canis_lupus_dingo
ENSMZEG00005007349	trmt12	96	49.515	ENSCHIG00000016574	TRMT12	94	49.515	Capra_hircus
ENSMZEG00005007349	trmt12	97	50.365	ENSCPOG00000026520	TRMT12	93	50.365	Cavia_porcellus
ENSMZEG00005007349	trmt12	96	50.121	ENSCSAG00000018615	TRMT12	92	50.121	Chlorocebus_sabaeus
ENSMZEG00005007349	trmt12	97	51.059	ENSCPBG00000014290	TRMT12	93	51.059	Chrysemys_picta_bellii
ENSMZEG00005007349	trmt12	71	48.110	ENSCING00000019633	-	97	48.110	Ciona_intestinalis
ENSMZEG00005007349	trmt12	72	50.000	ENSCSAVG00000000415	-	92	50.000	Ciona_savignyi
ENSMZEG00005007349	trmt12	97	48.500	ENSCGRG00001014834	Trmt12	95	48.500	Cricetulus_griseus_chok1gshd
ENSMZEG00005007349	trmt12	99	68.873	ENSCSEG00000002675	trmt12	95	68.873	Cynoglossus_semilaevis
ENSMZEG00005007349	trmt12	100	71.322	ENSCVAG00000005590	trmt12	100	71.322	Cyprinodon_variegatus
ENSMZEG00005007349	trmt12	99	58.637	ENSDARG00000060338	trmt12	99	58.865	Danio_rerio
ENSMZEG00005007349	trmt12	96	48.426	ENSETEG00000009373	TRMT12	92	48.426	Echinops_telfairi
ENSMZEG00005007349	trmt12	96	50.363	ENSEASG00005022441	TRMT12	94	50.363	Equus_asinus_asinus
ENSMZEG00005007349	trmt12	97	49.637	ENSEEUG00000004844	TRMT12	93	49.637	Erinaceus_europaeus
ENSMZEG00005007349	trmt12	99	65.517	ENSELUG00000004240	trmt12	99	67.204	Esox_lucius
ENSMZEG00005007349	trmt12	64	59.431	ENSFALG00000003825	TRMT12	93	67.157	Ficedula_albicollis
ENSMZEG00005007349	trmt12	96	50.363	ENSFDAG00000016647	TRMT12	94	50.363	Fukomys_damarensis
ENSMZEG00005007349	trmt12	93	63.904	ENSFHEG00000017338	trmt12	96	63.904	Fundulus_heteroclitus
ENSMZEG00005007349	trmt12	82	55.966	ENSGALG00000006773	TRMT12	92	50.000	Gallus_gallus
ENSMZEG00005007349	trmt12	100	73.449	ENSGAFG00000020056	trmt12	100	73.449	Gambusia_affinis
ENSMZEG00005007349	trmt12	96	74.413	ENSGACG00000017351	trmt12	99	74.413	Gasterosteus_aculeatus
ENSMZEG00005007349	trmt12	97	51.896	ENSGAGG00000006032	TRMT12	95	51.896	Gopherus_agassizii
ENSMZEG00005007349	trmt12	100	98.504	ENSHBUG00000016412	trmt12	100	98.504	Haplochromis_burtoni
ENSMZEG00005007349	trmt12	96	49.034	ENSHGLG00000020498	TRMT12	94	49.034	Heterocephalus_glaber_female
ENSMZEG00005007349	trmt12	96	49.275	ENSHGLG00100020132	TRMT12	94	49.275	Heterocephalus_glaber_male
ENSMZEG00005007349	trmt12	100	68.983	ENSHCOG00000005050	trmt12	95	74.695	Hippocampus_comes
ENSMZEG00005007349	trmt12	99	55.610	ENSIPUG00000018011	trmt12	92	55.610	Ictalurus_punctatus
ENSMZEG00005007349	trmt12	97	49.639	ENSSTOG00000030617	TRMT12	94	49.639	Ictidomys_tridecemlineatus
ENSMZEG00005007349	trmt12	99	74.876	ENSKMAG00000000891	trmt12	99	74.876	Kryptolebias_marmoratus
ENSMZEG00005007349	trmt12	53	75.688	ENSLBEG00000017456	-	89	75.688	Labrus_bergylta
ENSMZEG00005007349	trmt12	100	68.966	ENSLBEG00000028712	trmt12	100	68.966	Labrus_bergylta
ENSMZEG00005007349	trmt12	97	51.306	ENSLACG00000015869	TRMT12	94	51.306	Latimeria_chalumnae
ENSMZEG00005007349	trmt12	99	55.665	ENSLOCG00000015290	trmt12	99	55.665	Lepisosteus_oculatus
ENSMZEG00005007349	trmt12	96	50.605	ENSLAFG00000012519	TRMT12	94	50.605	Loxodonta_africana
ENSMZEG00005007349	trmt12	96	49.637	ENSMMUG00000015490	TRMT12	93	49.637	Macaca_mulatta
ENSMZEG00005007349	trmt12	99	73.020	ENSMAMG00000020311	trmt12	99	73.020	Mastacembelus_armatus
ENSMZEG00005007349	trmt12	99	51.064	ENSMGAG00000004174	TRMT12	95	51.064	Meleagris_gallopavo
ENSMZEG00005007349	trmt12	99	72.277	ENSMMOG00000000412	trmt12	99	72.277	Mola_mola
ENSMZEG00005007349	trmt12	96	50.000	ENSMODG00000021403	-	92	50.000	Monodelphis_domestica
ENSMZEG00005007349	trmt12	98	49.631	ENSMODG00000011798	-	85	49.631	Monodelphis_domestica
ENSMZEG00005007349	trmt12	100	76.543	ENSMALG00000008668	trmt12	100	76.543	Monopterus_albus
ENSMZEG00005007349	trmt12	96	50.000	MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	Mus_caroli
ENSMZEG00005007349	trmt12	96	50.485	ENSMUSG00000037085	Trmt12	92	50.485	Mus_musculus
ENSMZEG00005007349	trmt12	96	51.699	MGP_PahariEiJ_G0019829	Trmt12	93	51.699	Mus_pahari
ENSMZEG00005007349	trmt12	96	50.000	MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	Mus_spretus
ENSMZEG00005007349	trmt12	96	50.363	ENSMPUG00000019150	TRMT12	93	50.363	Mustela_putorius_furo
ENSMZEG00005007349	trmt12	96	49.637	ENSMLUG00000003753	TRMT12	94	49.637	Myotis_lucifugus
ENSMZEG00005007349	trmt12	97	48.551	ENSNGAG00000014548	Trmt12	95	48.551	Nannospalax_galili
ENSMZEG00005007349	trmt12	100	94.030	ENSNBRG00000021510	trmt12	100	94.030	Neolamprologus_brichardi
ENSMZEG00005007349	trmt12	96	46.117	ENSOPRG00000008067	TRMT12	92	46.117	Ochotona_princeps
ENSMZEG00005007349	trmt12	96	50.605	ENSODEG00000018933	TRMT12	94	50.605	Octodon_degus
ENSMZEG00005007349	trmt12	100	96.010	ENSONIG00000002614	trmt12	100	96.010	Oreochromis_niloticus
ENSMZEG00005007349	trmt12	96	46.683	ENSOANG00000009987	TRMT12	95	46.683	Ornithorhynchus_anatinus
ENSMZEG00005007349	trmt12	96	46.377	ENSOCUG00000026379	TRMT12	92	46.377	Oryctolagus_cuniculus
ENSMZEG00005007349	trmt12	100	72.070	ENSORLG00000001280	trmt12	100	72.070	Oryzias_latipes
ENSMZEG00005007349	trmt12	100	71.571	ENSORLG00020000708	trmt12	100	71.571	Oryzias_latipes_hni
ENSMZEG00005007349	trmt12	100	71.571	ENSORLG00015012344	trmt12	100	71.571	Oryzias_latipes_hsok
ENSMZEG00005007349	trmt12	100	70.574	ENSOMEG00000015267	trmt12	98	70.574	Oryzias_melastigma
ENSMZEG00005007349	trmt12	97	49.517	ENSOGAG00000015845	TRMT12	94	49.517	Otolemur_garnettii
ENSMZEG00005007349	trmt12	99	60.396	ENSPKIG00000004640	trmt12	99	60.769	Paramormyrops_kingsleyae
ENSMZEG00005007349	trmt12	58	59.851	ENSPSIG00000003476	TRMT12	99	59.851	Pelodiscus_sinensis
ENSMZEG00005007349	trmt12	99	63.119	ENSPMGG00000016356	trmt12	97	63.119	Periophthalmus_magnuspinnatus
ENSMZEG00005007349	trmt12	96	51.750	ENSPCIG00000002967	TRMT12	85	51.750	Phascolarctos_cinereus
ENSMZEG00005007349	trmt12	96	73.834	ENSPFOG00000016931	trmt12	94	73.834	Poecilia_formosa
ENSMZEG00005007349	trmt12	100	72.886	ENSPLAG00000020621	trmt12	100	72.886	Poecilia_latipinna
ENSMZEG00005007349	trmt12	100	74.378	ENSPMEG00000000818	trmt12	100	74.378	Poecilia_mexicana
ENSMZEG00005007349	trmt12	100	74.129	ENSPREG00000011621	trmt12	100	74.627	Poecilia_reticulata
ENSMZEG00005007349	trmt12	96	49.395	ENSPPYG00000018866	TRMT12	92	49.395	Pongo_abelii
ENSMZEG00005007349	trmt12	97	49.517	ENSPCAG00000000556	TRMT12	93	49.517	Procavia_capensis
ENSMZEG00005007349	trmt12	96	49.395	ENSPVAG00000009149	TRMT12	93	49.395	Pteropus_vampyrus
ENSMZEG00005007349	trmt12	96	96.867	ENSPNYG00000010696	trmt12	100	96.867	Pundamilia_nyererei
ENSMZEG00005007349	trmt12	99	56.086	ENSPNAG00000019028	trmt12	99	56.086	Pygocentrus_nattereri
ENSMZEG00005007349	trmt12	96	51.214	ENSRNOG00000008978	Trmt12	94	51.214	Rattus_norvegicus
ENSMZEG00005007349	trmt12	96	50.125	ENSSHAG00000003345	TRMT12	92	50.125	Sarcophilus_harrisii
ENSMZEG00005007349	trmt12	99	56.731	ENSSFOG00015006090	trmt12	99	56.731	Scleropages_formosus
ENSMZEG00005007349	trmt12	99	76.733	ENSSMAG00000013247	trmt12	99	76.733	Scophthalmus_maximus
ENSMZEG00005007349	trmt12	100	78.025	ENSSDUG00000006168	trmt12	100	78.025	Seriola_dumerili
ENSMZEG00005007349	trmt12	100	78.519	ENSSLDG00000025007	trmt12	100	78.519	Seriola_lalandi_dorsalis
ENSMZEG00005007349	trmt12	97	52.370	ENSSPUG00000005321	TRMT12	93	52.370	Sphenodon_punctatus
ENSMZEG00005007349	trmt12	100	80.798	ENSSPAG00000009435	trmt12	97	80.798	Stegastes_partitus
ENSMZEG00005007349	trmt12	99	49.400	ENSTGUG00000002280	TRMT12	99	50.239	Taeniopygia_guttata
ENSMZEG00005007349	trmt12	99	67.742	ENSTRUG00000011548	trmt12	99	67.742	Takifugu_rubripes
ENSMZEG00005007349	trmt12	99	65.594	ENSTNIG00000016866	trmt12	99	65.594	Tetraodon_nigroviridis
ENSMZEG00005007349	trmt12	96	51.332	ENSUAMG00000002067	TRMT12	95	51.332	Ursus_americanus
ENSMZEG00005007349	trmt12	96	50.605	ENSVPAG00000006519	TRMT12	93	50.605	Vicugna_pacos
ENSMZEG00005007349	trmt12	98	49.406	ENSVVUG00000016790	TRMT12	93	49.406	Vulpes_vulpes
ENSMZEG00005007349	trmt12	99	52.130	ENSXETG00000009641	trmt12	95	52.130	Xenopus_tropicalis
ENSMZEG00005007349	trmt12	100	73.333	ENSXCOG00000016505	trmt12	100	73.333	Xiphophorus_couchianus
ENSMZEG00005007349	trmt12	100	73.762	ENSXMAG00000025318	trmt12	100	73.762	Xiphophorus_maculatus