EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 1128 bases
Position: chrLG3:31999332-32000459
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009789	RRM_5	PF13893.6	1.7e-07	1	1
ENSMZEP00005009789	RRM_1	PF00076.22	8.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010149	-	975	-	ENSMZEP00005009789	324 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005007417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007417	-	100	85.057	ENSAPOG00000002953	rbm4.3	100	85.057	Acanthochromis_polyacanthus
ENSMZEG00005007417	-	97	64.307	ENSAPOG00000002991	rbm4.3	96	61.834	Acanthochromis_polyacanthus
ENSMZEG00005007417	-	100	94.379	ENSACIG00000021311	-	100	94.379	Amphilophus_citrinellus
ENSMZEG00005007417	-	97	64.095	ENSACIG00000021295	rbm4.3	96	62.611	Amphilophus_citrinellus
ENSMZEG00005007417	-	97	64.201	ENSAOCG00000007992	rbm4.3	99	62.644	Amphiprion_ocellaris
ENSMZEG00005007417	-	100	83.862	ENSAOCG00000008015	rbm4.3	100	83.573	Amphiprion_ocellaris
ENSMZEG00005007417	-	100	84.726	ENSAPEG00000017324	rbm4.3	100	82.997	Amphiprion_percula
ENSMZEG00005007417	-	97	64.201	ENSAPEG00000017288	rbm4.3	99	62.644	Amphiprion_percula
ENSMZEG00005007417	-	97	66.066	ENSATEG00000019395	rbm4.3	96	63.964	Anabas_testudineus
ENSMZEG00005007417	-	100	85.014	ENSATEG00000019375	rbm4.3	100	84.726	Anabas_testudineus
ENSMZEG00005007417	-	100	95.858	ENSACLG00000010620	-	100	95.858	Astatotilapia_calliptera
ENSMZEG00005007417	-	99	63.818	ENSACLG00000010642	rbm4.3	99	63.248	Astatotilapia_calliptera
ENSMZEG00005007417	-	61	71.226	ENSAMXG00000040224	rbm4.3	82	67.647	Astyanax_mexicanus
ENSMZEG00005007417	-	100	77.143	ENSCSEG00000013659	rbm4.3	100	76.571	Cynoglossus_semilaevis
ENSMZEG00005007417	-	99	60.172	ENSCVAG00000008502	rbm4.3	99	60.745	Cyprinodon_variegatus
ENSMZEG00005007417	-	100	72.515	ENSCVAG00000008508	rbm4.3	100	76.023	Cyprinodon_variegatus
ENSMZEG00005007417	-	95	68.343	ENSDARG00000022129	rbm4.3	97	64.223	Danio_rerio
ENSMZEG00005007417	-	100	63.636	ENSELUG00000022168	rbm4.3	100	64.672	Esox_lucius
ENSMZEG00005007417	-	99	70.201	ENSELUG00000022155	rbm4.3	99	68.481	Esox_lucius
ENSMZEG00005007417	-	99	68.000	ENSELUG00000022150	rbm4.3	97	64.706	Esox_lucius
ENSMZEG00005007417	-	82	76.703	ENSFHEG00000023137	rbm4.3	84	77.407	Fundulus_heteroclitus
ENSMZEG00005007417	-	100	58.807	ENSGAFG00000001935	rbm4.3	100	57.386	Gambusia_affinis
ENSMZEG00005007417	-	94	78.082	ENSGACG00000019980	rbm4.3	95	59.531	Gasterosteus_aculeatus
ENSMZEG00005007417	-	100	95.858	ENSHBUG00000009020	-	100	95.858	Haplochromis_burtoni
ENSMZEG00005007417	-	99	64.103	ENSHBUG00000009051	rbm4.3	99	63.533	Haplochromis_burtoni
ENSMZEG00005007417	-	95	69.069	ENSHCOG00000010349	rbm4.3	100	68.750	Hippocampus_comes
ENSMZEG00005007417	-	96	56.928	ENSHCOG00000010363	rbm4.3	91	52.663	Hippocampus_comes
ENSMZEG00005007417	-	100	63.920	ENSIPUG00000022943	RBM4B	100	64.205	Ictalurus_punctatus
ENSMZEG00005007417	-	100	75.073	ENSKMAG00000017468	rbm4.3	100	71.848	Kryptolebias_marmoratus
ENSMZEG00005007417	-	97	56.973	ENSKMAG00000014541	rbm4.3	95	57.647	Kryptolebias_marmoratus
ENSMZEG00005007417	-	100	81.322	ENSLBEG00000001071	-	100	81.034	Labrus_bergylta
ENSMZEG00005007417	-	53	67.380	ENSLBEG00000001025	rbm4.3	68	68.000	Labrus_bergylta
ENSMZEG00005007417	-	95	56.787	ENSLOCG00000002755	rbm4.3	100	58.466	Lepisosteus_oculatus
ENSMZEG00005007417	-	97	63.798	ENSMAMG00000004701	rbm4.3	96	62.018	Mastacembelus_armatus
ENSMZEG00005007417	-	100	84.150	ENSMAMG00000004715	-	84	83.862	Mastacembelus_armatus
ENSMZEG00005007417	-	87	66.779	ENSMZEG00005007441	rbm4.3	78	64.286	Maylandia_zebra
ENSMZEG00005007417	-	87	86.102	ENSMZEG00005028537	-	82	85.666	Maylandia_zebra
ENSMZEG00005007417	-	99	63.818	ENSMZEG00005028540	rbm4.3	99	63.248	Maylandia_zebra
ENSMZEG00005007417	-	97	61.652	ENSMMOG00000012191	rbm4.3	96	61.357	Mola_mola
ENSMZEG00005007417	-	92	65.495	ENSMALG00000015014	-	89	61.661	Monopterus_albus
ENSMZEG00005007417	-	98	62.538	ENSMALG00000003032	rbm4.3	93	61.489	Monopterus_albus
ENSMZEG00005007417	-	87	85.763	ENSMALG00000003001	rbm4.3	86	85.324	Monopterus_albus
ENSMZEG00005007417	-	97	63.314	ENSNBRG00000012372	rbm4.3	96	61.243	Neolamprologus_brichardi
ENSMZEG00005007417	-	100	95.858	ENSONIG00000018380	-	100	95.858	Oreochromis_niloticus
ENSMZEG00005007417	-	97	63.050	ENSONIG00000018378	rbm4.3	96	61.290	Oreochromis_niloticus
ENSMZEG00005007417	-	97	53.982	ENSORLG00000024749	rbm4.3	95	49.405	Oryzias_latipes
ENSMZEG00005007417	-	100	74.000	ENSORLG00000012473	rbm4.3	100	72.286	Oryzias_latipes
ENSMZEG00005007417	-	100	76.571	ENSORLG00000011589	rbm4.3	100	74.286	Oryzias_latipes
ENSMZEG00005007417	-	99	55.460	ENSORLG00020012482	rbm4.3	99	50.720	Oryzias_latipes_hni
ENSMZEG00005007417	-	100	74.000	ENSORLG00020012464	rbm4.3	100	72.286	Oryzias_latipes_hni
ENSMZEG00005007417	-	100	76.286	ENSORLG00020012474	rbm4.3	100	74.286	Oryzias_latipes_hni
ENSMZEG00005007417	-	97	54.277	ENSORLG00015013721	rbm4.3	99	50.287	Oryzias_latipes_hsok
ENSMZEG00005007417	-	100	74.857	ENSORLG00015013698	rbm4.3	100	74.571	Oryzias_latipes_hsok
ENSMZEG00005007417	-	100	74.000	ENSORLG00015013686	rbm4.3	100	72.286	Oryzias_latipes_hsok
ENSMZEG00005007417	-	97	73.451	ENSOMEG00000005929	rbm4.3	100	72.934	Oryzias_melastigma
ENSMZEG00005007417	-	97	56.140	ENSOMEG00000005950	rbm4.3	99	55.874	Oryzias_melastigma
ENSMZEG00005007417	-	100	69.014	ENSOMEG00000005918	rbm4.3	100	69.014	Oryzias_melastigma
ENSMZEG00005007417	-	92	67.823	ENSPKIG00000007001	rbm4.3	100	64.286	Paramormyrops_kingsleyae
ENSMZEG00005007417	-	100	71.510	ENSPLAG00000006131	rbm4.3	100	70.940	Poecilia_latipinna
ENSMZEG00005007417	-	99	59.943	ENSPLAG00000006077	rbm4.3	99	58.523	Poecilia_latipinna
ENSMZEG00005007417	-	99	60.114	ENSPMEG00000024260	rbm4.3	99	58.405	Poecilia_mexicana
ENSMZEG00005007417	-	100	74.854	ENSPMEG00000024263	rbm4.3	100	77.193	Poecilia_mexicana
ENSMZEG00005007417	-	100	71.225	ENSPMEG00000024271	rbm4.3	100	70.655	Poecilia_mexicana
ENSMZEG00005007417	-	99	59.718	ENSPREG00000002093	-	99	59.259	Poecilia_reticulata
ENSMZEG00005007417	-	100	67.816	ENSPREG00000002156	rbm4.3	100	68.678	Poecilia_reticulata
ENSMZEG00005007417	-	100	95.858	ENSPNYG00000018541	rbm4.3	100	95.858	Pundamilia_nyererei
ENSMZEG00005007417	-	99	63.533	ENSPNYG00000018564	rbm4.3	99	63.248	Pundamilia_nyererei
ENSMZEG00005007417	-	100	64.088	ENSPNAG00000013053	rbm4.3	100	63.510	Pygocentrus_nattereri
ENSMZEG00005007417	-	100	61.878	ENSSFOG00015015563	rbm4.3	100	61.602	Scleropages_formosus
ENSMZEG00005007417	-	100	81.268	ENSSMAG00000013644	rbm4.3	100	79.539	Scophthalmus_maximus
ENSMZEG00005007417	-	97	61.607	ENSSMAG00000013653	rbm4.3	96	56.845	Scophthalmus_maximus
ENSMZEG00005007417	-	100	84.150	ENSSDUG00000018435	rbm4.3	100	83.862	Seriola_dumerili
ENSMZEG00005007417	-	97	64.307	ENSSDUG00000018422	rbm4.3	96	59.882	Seriola_dumerili
ENSMZEG00005007417	-	100	84.150	ENSSLDG00000017204	rbm4.3	100	83.862	Seriola_lalandi_dorsalis
ENSMZEG00005007417	-	97	63.609	ENSSLDG00000017182	rbm4.3	96	59.172	Seriola_lalandi_dorsalis
ENSMZEG00005007417	-	100	83.285	ENSSPAG00000008062	rbm4.3	100	82.997	Stegastes_partitus
ENSMZEG00005007417	-	96	61.607	ENSSPAG00000008041	rbm4.3	81	58.929	Stegastes_partitus
ENSMZEG00005007417	-	97	58.876	ENSTRUG00000023874	rbm4.3	96	61.357	Takifugu_rubripes
ENSMZEG00005007417	-	100	80.229	ENSTRUG00000020901	rbm4.3	100	78.797	Takifugu_rubripes
ENSMZEG00005007417	-	100	79.251	ENSTNIG00000005668	rbm4.3	100	78.963	Tetraodon_nigroviridis
ENSMZEG00005007417	-	97	59.531	ENSXCOG00000005996	rbm4.3	97	59.412	Xiphophorus_couchianus
ENSMZEG00005007417	-	100	73.684	ENSXCOG00000006001	rbm4.3	100	76.023	Xiphophorus_couchianus
ENSMZEG00005007417	-	100	71.510	ENSXMAG00000011698	rbm4.3	100	71.795	Xiphophorus_maculatus
ENSMZEG00005007417	-	97	59.184	ENSXMAG00000025173	rbm4.3	99	58.974	Xiphophorus_maculatus
ENSMZEG00005007417	-	100	76.023	ENSXMAG00000021997	rbm4.3	100	76.608	Xiphophorus_maculatus