EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007426 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 3563 bases
Position: chrLG3:8799495-8803057
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009795	zf-C2H2	PF00096.26	8.4e-36	1	6
ENSMZEP00005009795	zf-C2H2	PF00096.26	8.4e-36	2	6
ENSMZEP00005009795	zf-C2H2	PF00096.26	8.4e-36	3	6
ENSMZEP00005009795	zf-C2H2	PF00096.26	8.4e-36	4	6
ENSMZEP00005009795	zf-C2H2	PF00096.26	8.4e-36	5	6
ENSMZEP00005009795	zf-C2H2	PF00096.26	8.4e-36	6	6
ENSMZEP00005009795	zf-met	PF12874.7	4.1e-14	1	3
ENSMZEP00005009795	zf-met	PF12874.7	4.1e-14	2	3
ENSMZEP00005009795	zf-met	PF12874.7	4.1e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010155	-	1071	-	ENSMZEP00005009795	356 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005007426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007426	-	80	61.875	ENSACIG00000000360	si:ch211-241b2.1	89	61.875	Amphilophus_citrinellus
ENSMZEG00005007426	-	75	46.341	ENSACIG00000007882	-	81	46.341	Amphilophus_citrinellus
ENSMZEG00005007426	-	64	40.667	ENSACIG00000008886	znf1164	87	40.667	Amphilophus_citrinellus
ENSMZEG00005007426	-	94	45.217	ENSATEG00000008667	-	93	45.217	Anabas_testudineus
ENSMZEG00005007426	-	87	47.716	ENSATEG00000008683	si:ch211-241b2.1	83	47.716	Anabas_testudineus
ENSMZEG00005007426	-	62	45.977	ENSACLG00000000521	-	93	45.977	Astatotilapia_calliptera
ENSMZEG00005007426	-	64	39.053	ENSACLG00000017449	-	57	37.917	Astatotilapia_calliptera
ENSMZEG00005007426	-	87	59.649	ENSACLG00000024670	-	89	60.000	Astatotilapia_calliptera
ENSMZEG00005007426	-	65	54.419	ENSAMXG00000043291	-	67	54.419	Astyanax_mexicanus
ENSMZEG00005007426	-	66	56.886	ENSAMXG00000041650	-	85	56.886	Astyanax_mexicanus
ENSMZEG00005007426	-	67	50.000	ENSAMXG00000029660	-	51	50.000	Astyanax_mexicanus
ENSMZEG00005007426	-	86	37.079	ENSCSEG00000015585	-	87	37.079	Cynoglossus_semilaevis
ENSMZEG00005007426	-	67	49.367	ENSDARG00000100361	znf1174	75	49.367	Danio_rerio
ENSMZEG00005007426	-	69	51.965	ENSDARG00000105056	znf45l	90	51.965	Danio_rerio
ENSMZEG00005007426	-	65	52.727	ENSDARG00000102401	znf1001	93	52.727	Danio_rerio
ENSMZEG00005007426	-	68	54.902	ENSDARG00000100803	zgc:173517	90	54.902	Danio_rerio
ENSMZEG00005007426	-	71	51.786	ENSDARG00000111614	znf1183	97	51.786	Danio_rerio
ENSMZEG00005007426	-	65	48.684	ENSDARG00000116765	zgc:162962	98	48.276	Danio_rerio
ENSMZEG00005007426	-	69	53.017	ENSDARG00000097521	si:dkey-111k8.5	89	53.017	Danio_rerio
ENSMZEG00005007426	-	82	54.404	ENSDARG00000109703	FO834825.1	99	54.404	Danio_rerio
ENSMZEG00005007426	-	64	52.727	ENSDARG00000115857	znf1001	93	52.727	Danio_rerio
ENSMZEG00005007426	-	68	54.587	ENSDARG00000113011	zgc:113102	92	54.587	Danio_rerio
ENSMZEG00005007426	-	64	52.632	ENSDARG00000053165	zgc:113377	80	52.632	Danio_rerio
ENSMZEG00005007426	-	69	54.701	ENSDARG00000099731	CABZ01066719.1	99	54.701	Danio_rerio
ENSMZEG00005007426	-	65	55.155	ENSDARG00000103777	znf1001	98	55.155	Danio_rerio
ENSMZEG00005007426	-	68	53.886	ENSDARG00000105074	BX000701.2	99	53.886	Danio_rerio
ENSMZEG00005007426	-	80	52.535	ENSDARG00000078814	si:dkey-34m19.3	76	52.535	Danio_rerio
ENSMZEG00005007426	-	68	55.263	ENSDARG00000098248	CABZ01081730.1	97	55.263	Danio_rerio
ENSMZEG00005007426	-	66	55.172	ENSDARG00000099890	CU207221.2	99	55.172	Danio_rerio
ENSMZEG00005007426	-	65	44.554	ENSEBUG00000015073	-	82	45.946	Eptatretus_burgeri
ENSMZEG00005007426	-	100	48.276	ENSELUG00000008131	-	100	48.276	Esox_lucius
ENSMZEG00005007426	-	73	50.439	ENSFHEG00000018009	-	56	50.439	Fundulus_heteroclitus
ENSMZEG00005007426	-	67	49.171	ENSFHEG00000013152	-	52	49.171	Fundulus_heteroclitus
ENSMZEG00005007426	-	71	43.307	ENSFHEG00000018209	-	77	43.307	Fundulus_heteroclitus
ENSMZEG00005007426	-	91	94.769	ENSHBUG00000018916	-	87	94.769	Haplochromis_burtoni
ENSMZEG00005007426	-	97	46.512	ENSHBUG00000009953	-	91	46.512	Haplochromis_burtoni
ENSMZEG00005007426	-	87	44.000	ENSKMAG00000014629	-	81	44.000	Kryptolebias_marmoratus
ENSMZEG00005007426	-	66	50.400	ENSKMAG00000009563	-	76	50.400	Kryptolebias_marmoratus
ENSMZEG00005007426	-	80	44.068	ENSLBEG00000028628	znf1174	62	44.068	Labrus_bergylta
ENSMZEG00005007426	-	61	45.714	ENSLBEG00000022939	-	66	45.714	Labrus_bergylta
ENSMZEG00005007426	-	99	44.898	ENSMAMG00000014743	-	90	40.506	Mastacembelus_armatus
ENSMZEG00005007426	-	87	67.347	ENSMZEG00005027943	-	94	67.347	Maylandia_zebra
ENSMZEG00005007426	-	57	42.373	ENSMZEG00005005162	-	67	42.373	Maylandia_zebra
ENSMZEG00005007426	-	63	38.462	ENSMZEG00005022161	-	94	37.931	Maylandia_zebra
ENSMZEG00005007426	-	65	56.579	ENSMZEG00005025729	-	89	56.579	Maylandia_zebra
ENSMZEG00005007426	-	79	72.792	ENSMZEG00005026470	-	76	72.792	Maylandia_zebra
ENSMZEG00005007426	-	87	72.168	ENSMZEG00005027793	-	94	72.168	Maylandia_zebra
ENSMZEG00005007426	-	63	47.929	ENSMZEG00005021426	-	75	47.929	Maylandia_zebra
ENSMZEG00005007426	-	64	39.207	ENSMZEG00005025568	-	80	39.207	Maylandia_zebra
ENSMZEG00005007426	-	83	38.559	ENSMALG00000008638	-	67	38.559	Monopterus_albus
ENSMZEG00005007426	-	96	48.804	ENSMALG00000018074	-	93	48.804	Monopterus_albus
ENSMZEG00005007426	-	87	56.069	ENSNBRG00000000577	-	90	58.586	Neolamprologus_brichardi
ENSMZEG00005007426	-	71	37.500	ENSONIG00000006585	-	93	37.500	Oreochromis_niloticus
ENSMZEG00005007426	-	64	41.739	ENSONIG00000013908	-	99	39.111	Oreochromis_niloticus
ENSMZEG00005007426	-	63	41.500	ENSONIG00000003363	-	99	41.500	Oreochromis_niloticus
ENSMZEG00005007426	-	63	50.000	ENSORLG00020019341	-	86	62.791	Oryzias_latipes_hni
ENSMZEG00005007426	-	99	40.678	ENSPKIG00000018633	-	100	40.678	Paramormyrops_kingsleyae
ENSMZEG00005007426	-	71	40.964	ENSPKIG00000020324	-	58	40.964	Paramormyrops_kingsleyae
ENSMZEG00005007426	-	79	41.593	ENSPMGG00000001558	znf1174	78	41.593	Periophthalmus_magnuspinnatus
ENSMZEG00005007426	-	65	49.324	ENSPFOG00000001144	-	100	49.324	Poecilia_formosa
ENSMZEG00005007426	-	64	42.647	ENSPFOG00000011766	-	97	42.647	Poecilia_formosa
ENSMZEG00005007426	-	93	46.222	ENSPLAG00000016561	zgc:113348	93	45.509	Poecilia_latipinna
ENSMZEG00005007426	-	65	46.067	ENSPMEG00000007573	zgc:113343	69	46.067	Poecilia_mexicana
ENSMZEG00005007426	-	67	44.311	ENSPREG00000005538	-	74	44.311	Poecilia_reticulata
ENSMZEG00005007426	-	62	45.833	ENSPREG00000014105	-	79	45.833	Poecilia_reticulata
ENSMZEG00005007426	-	65	45.361	ENSPREG00000001514	zgc:113343	63	44.944	Poecilia_reticulata
ENSMZEG00005007426	-	64	40.588	ENSPNYG00000024183	zgc:173577	98	39.648	Pundamilia_nyererei
ENSMZEG00005007426	-	87	60.000	ENSSDUG00000008682	-	83	60.000	Seriola_dumerili
ENSMZEG00005007426	-	73	42.135	ENSSPAG00000006539	-	93	42.135	Stegastes_partitus
ENSMZEG00005007426	-	65	35.260	ENSSPAG00000009426	-	84	32.749	Stegastes_partitus
ENSMZEG00005007426	-	83	42.193	ENSSPAG00000013109	si:ch211-241b2.1	93	45.133	Stegastes_partitus
ENSMZEG00005007426	-	66	48.901	ENSTNIG00000000277	-	93	48.901	Tetraodon_nigroviridis
ENSMZEG00005007426	-	65	44.944	ENSXCOG00000017871	zgc:113343	64	44.944	Xiphophorus_couchianus
ENSMZEG00005007426	-	65	45.055	ENSXMAG00000019923	zgc:113343	64	45.055	Xiphophorus_maculatus