EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007477 (Gene tree)
Gene ID: 101467009
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11596 bases
Position: chrLG14:25030720-25042315
Accession: 101467009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009885	AARP2CN	PF08142.12	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010247	-	2481	XM_004558159	ENSMZEP00005009885	826 (aa)	XP_004558216	-

Gene Model

Click here to download ENSMZEG00005007477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007477	tsr1	98	55.366	ENSG00000167721	TSR1	98	55.854	Homo_sapiens
ENSMZEG00005007477	tsr1	100	87.709	ENSAPOG00000020891	tsr1	100	88.067	Acanthochromis_polyacanthus
ENSMZEG00005007477	tsr1	99	54.710	ENSAMEG00000007599	TSR1	99	54.142	Ailuropoda_melanoleuca
ENSMZEG00005007477	tsr1	100	89.385	ENSACIG00000007090	tsr1	100	90.109	Amphilophus_citrinellus
ENSMZEG00005007477	tsr1	100	86.811	ENSAOCG00000023284	tsr1	100	87.530	Amphiprion_ocellaris
ENSMZEG00005007477	tsr1	93	86.358	ENSAPEG00000008452	tsr1	100	87.130	Amphiprion_percula
ENSMZEG00005007477	tsr1	100	86.158	ENSATEG00000021961	tsr1	100	86.158	Anabas_testudineus
ENSMZEG00005007477	tsr1	90	59.211	ENSAPLG00000013422	TSR1	100	57.874	Anas_platyrhynchos
ENSMZEG00005007477	tsr1	71	49.832	ENSACAG00000000859	TSR1	92	49.495	Anolis_carolinensis
ENSMZEG00005007477	tsr1	98	55.447	ENSANAG00000031071	TSR1	98	55.569	Aotus_nancymaae
ENSMZEG00005007477	tsr1	100	98.554	ENSACLG00000007595	tsr1	99	98.554	Astatotilapia_calliptera
ENSMZEG00005007477	tsr1	50	74.822	ENSAMXG00000008470	tsr1	90	74.473	Astyanax_mexicanus
ENSMZEG00005007477	tsr1	99	55.623	ENSBTAG00000004225	TSR1	99	56.145	Bos_taurus
ENSMZEG00005007477	tsr1	96	38.650	WBGene00006497	tag-151	96	38.821	Caenorhabditis_elegans
ENSMZEG00005007477	tsr1	97	54.768	ENSCJAG00000012456	TSR1	98	54.890	Callithrix_jacchus
ENSMZEG00005007477	tsr1	99	55.716	ENSCAFG00000002106	-	99	55.436	Canis_familiaris
ENSMZEG00005007477	tsr1	89	53.652	ENSCAFG00000019273	-	100	57.122	Canis_familiaris
ENSMZEG00005007477	tsr1	99	55.596	ENSCAFG00020009728	TSR1	99	55.317	Canis_lupus_dingo
ENSMZEG00005007477	tsr1	99	56.659	ENSCHIG00000023935	TSR1	99	56.695	Capra_hircus
ENSMZEG00005007477	tsr1	99	55.435	ENSTSYG00000005468	TSR1	99	55.822	Carlito_syrichta
ENSMZEG00005007477	tsr1	92	55.671	ENSCPOG00000014833	TSR1	99	54.805	Cavia_porcellus
ENSMZEG00005007477	tsr1	92	53.896	ENSCCAG00000028962	TSR1	98	54.026	Cebus_capucinus
ENSMZEG00005007477	tsr1	98	55.718	ENSCATG00000044262	TSR1	99	55.474	Cercocebus_atys
ENSMZEG00005007477	tsr1	99	56.000	ENSCLAG00000005567	TSR1	99	55.744	Chinchilla_lanigera
ENSMZEG00005007477	tsr1	98	55.718	ENSCSAG00000013788	TSR1	99	55.596	Chlorocebus_sabaeus
ENSMZEG00005007477	tsr1	98	55.976	ENSCPBG00000020363	TSR1	97	55.260	Chrysemys_picta_bellii
ENSMZEG00005007477	tsr1	96	44.540	ENSCING00000020658	-	99	43.849	Ciona_intestinalis
ENSMZEG00005007477	tsr1	96	43.719	ENSCSAVG00000001875	-	100	43.735	Ciona_savignyi
ENSMZEG00005007477	tsr1	98	49.392	ENSCANG00000033056	TSR1	99	51.766	Colobus_angolensis_palliatus
ENSMZEG00005007477	tsr1	99	54.469	ENSCGRG00001023942	Tsr1	99	53.735	Cricetulus_griseus_chok1gshd
ENSMZEG00005007477	tsr1	100	79.017	ENSCSEG00000013009	tsr1	100	81.152	Cynoglossus_semilaevis
ENSMZEG00005007477	tsr1	100	83.995	ENSCVAG00000000506	tsr1	100	84.116	Cyprinodon_variegatus
ENSMZEG00005007477	tsr1	100	75.361	ENSDARG00000007744	tsr1	100	75.721	Danio_rerio
ENSMZEG00005007477	tsr1	99	56.695	ENSDNOG00000004715	TSR1	99	58.192	Dasypus_novemcinctus
ENSMZEG00005007477	tsr1	96	49.560	ENSDORG00000023234	-	99	48.997	Dipodomys_ordii
ENSMZEG00005007477	tsr1	99	55.676	ENSDORG00000016371	-	99	55.114	Dipodomys_ordii
ENSMZEG00005007477	tsr1	96	44.321	FBgn0037073	Tsr1	96	43.780	Drosophila_melanogaster
ENSMZEG00005007477	tsr1	87	67.541	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSMZEG00005007477	tsr1	95	51.253	ENSEBUG00000013731	TSR1	98	50.439	Eptatretus_burgeri
ENSMZEG00005007477	tsr1	99	56.039	ENSEASG00005009302	TSR1	97	56.092	Equus_asinus_asinus
ENSMZEG00005007477	tsr1	99	55.918	ENSECAG00000009114	TSR1	99	55.971	Equus_caballus
ENSMZEG00005007477	tsr1	100	75.808	ENSELUG00000020984	tsr1	96	75.808	Esox_lucius
ENSMZEG00005007477	tsr1	99	54.776	ENSFCAG00000006313	TSR1	99	55.355	Felis_catus
ENSMZEG00005007477	tsr1	100	58.273	ENSFALG00000006532	TSR1	99	57.914	Ficedula_albicollis
ENSMZEG00005007477	tsr1	99	56.068	ENSFDAG00000006038	TSR1	99	55.583	Fukomys_damarensis
ENSMZEG00005007477	tsr1	100	82.816	ENSFHEG00000003626	tsr1	99	82.936	Fundulus_heteroclitus
ENSMZEG00005007477	tsr1	100	73.229	ENSGMOG00000010336	tsr1	100	73.741	Gadus_morhua
ENSMZEG00005007477	tsr1	100	82.994	ENSGAFG00000012993	tsr1	99	82.572	Gambusia_affinis
ENSMZEG00005007477	tsr1	100	82.297	ENSGACG00000010843	tsr1	100	82.416	Gasterosteus_aculeatus
ENSMZEG00005007477	tsr1	98	56.098	ENSGAGG00000025619	-	99	55.381	Gopherus_agassizii
ENSMZEG00005007477	tsr1	98	55.488	ENSGGOG00000001704	TSR1	98	56.098	Gorilla_gorilla
ENSMZEG00005007477	tsr1	100	98.319	ENSHBUG00000017904	tsr1	100	98.196	Haplochromis_burtoni
ENSMZEG00005007477	tsr1	99	56.643	ENSHGLG00000012806	-	99	56.522	Heterocephalus_glaber_female
ENSMZEG00005007477	tsr1	96	49.562	ENSHGLG00000015688	-	98	49.061	Heterocephalus_glaber_female
ENSMZEG00005007477	tsr1	99	56.643	ENSHGLG00100015392	TSR1	99	56.522	Heterocephalus_glaber_male
ENSMZEG00005007477	tsr1	100	80.482	ENSHCOG00000001432	tsr1	100	80.602	Hippocampus_comes
ENSMZEG00005007477	tsr1	100	74.524	ENSIPUG00000004618	tsr1	100	74.524	Ictalurus_punctatus
ENSMZEG00005007477	tsr1	99	56.679	ENSSTOG00000011819	TSR1	99	56.438	Ictidomys_tridecemlineatus
ENSMZEG00005007477	tsr1	91	54.796	ENSJJAG00000019505	Tsr1	95	53.325	Jaculus_jaculus
ENSMZEG00005007477	tsr1	100	83.234	ENSKMAG00000005763	tsr1	99	84.311	Kryptolebias_marmoratus
ENSMZEG00005007477	tsr1	100	85.048	ENSLBEG00000021823	tsr1	99	86.005	Labrus_bergylta
ENSMZEG00005007477	tsr1	100	58.076	ENSLACG00000002197	TSR1	100	56.557	Latimeria_chalumnae
ENSMZEG00005007477	tsr1	91	78.667	ENSLOCG00000006491	TSR1	99	57.609	Lepisosteus_oculatus
ENSMZEG00005007477	tsr1	99	55.475	ENSMFAG00000021330	TSR1	99	55.718	Macaca_fascicularis
ENSMZEG00005007477	tsr1	99	55.355	ENSMMUG00000017519	TSR1	99	55.596	Macaca_mulatta
ENSMZEG00005007477	tsr1	99	55.475	ENSMNEG00000031382	TSR1	99	55.718	Macaca_nemestrina
ENSMZEG00005007477	tsr1	98	55.596	ENSMLEG00000036733	TSR1	99	55.353	Mandrillus_leucophaeus
ENSMZEG00005007477	tsr1	100	84.286	ENSMAMG00000017918	tsr1	99	84.881	Mastacembelus_armatus
ENSMZEG00005007477	tsr1	100	57.074	ENSMGAG00000005576	TSR1	100	55.728	Meleagris_gallopavo
ENSMZEG00005007477	tsr1	99	55.932	ENSMICG00000012943	TSR1	99	56.695	Microcebus_murinus
ENSMZEG00005007477	tsr1	99	55.247	ENSMOCG00000022764	Tsr1	99	54.524	Microtus_ochrogaster
ENSMZEG00005007477	tsr1	100	84.356	ENSMMOG00000014280	tsr1	100	84.717	Mola_mola
ENSMZEG00005007477	tsr1	99	56.475	ENSMODG00000010658	TSR1	99	56.579	Monodelphis_domestica
ENSMZEG00005007477	tsr1	100	87.440	ENSMALG00000011681	tsr1	100	87.440	Monopterus_albus
ENSMZEG00005007477	tsr1	99	54.831	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.665	Mus_caroli
ENSMZEG00005007477	tsr1	99	55.314	ENSMUSG00000038335	Tsr1	99	55.144	Mus_musculus
ENSMZEG00005007477	tsr1	99	55.797	MGP_PahariEiJ_G0017864	Tsr1	99	55.622	Mus_pahari
ENSMZEG00005007477	tsr1	99	55.435	MGP_SPRETEiJ_G0017570	Tsr1	99	55.263	Mus_spretus
ENSMZEG00005007477	tsr1	81	58.468	ENSMPUG00000013000	TSR1	100	58.187	Mustela_putorius_furo
ENSMZEG00005007477	tsr1	99	56.159	ENSMLUG00000003505	TSR1	99	56.558	Myotis_lucifugus
ENSMZEG00005007477	tsr1	100	97.002	ENSNBRG00000020728	tsr1	99	97.002	Neolamprologus_brichardi
ENSMZEG00005007477	tsr1	98	50.122	ENSNLEG00000017184	TSR1	98	50.491	Nomascus_leucogenys
ENSMZEG00005007477	tsr1	99	51.990	ENSMEUG00000015828	TSR1	99	52.556	Notamacropus_eugenii
ENSMZEG00005007477	tsr1	100	93.365	ENSONIG00000013131	tsr1	100	93.602	Oreochromis_niloticus
ENSMZEG00005007477	tsr1	99	55.676	ENSOCUG00000014256	TSR1	99	55.596	Oryctolagus_cuniculus
ENSMZEG00005007477	tsr1	100	84.551	ENSORLG00000004926	tsr1	99	84.311	Oryzias_latipes
ENSMZEG00005007477	tsr1	100	84.431	ENSORLG00020008792	tsr1	99	84.311	Oryzias_latipes_hni
ENSMZEG00005007477	tsr1	100	84.671	ENSORLG00015013838	tsr1	99	84.431	Oryzias_latipes_hsok
ENSMZEG00005007477	tsr1	100	85.354	ENSOMEG00000004830	tsr1	99	85.354	Oryzias_melastigma
ENSMZEG00005007477	tsr1	99	55.090	ENSOGAG00000004492	TSR1	99	55.569	Otolemur_garnettii
ENSMZEG00005007477	tsr1	99	56.401	ENSOARG00000015437	TSR1	97	56.438	Ovis_aries
ENSMZEG00005007477	tsr1	98	55.366	ENSPPAG00000036355	TSR1	98	55.854	Pan_paniscus
ENSMZEG00005007477	tsr1	99	54.414	ENSPPRG00000015519	-	99	54.753	Panthera_pardus
ENSMZEG00005007477	tsr1	99	54.534	ENSPTIG00000010608	TSR1	99	54.874	Panthera_tigris_altaica
ENSMZEG00005007477	tsr1	98	55.366	ENSPTRG00000008547	TSR1	98	55.854	Pan_troglodytes
ENSMZEG00005007477	tsr1	98	53.106	ENSPANG00000024463	TSR1	99	53.350	Papio_anubis
ENSMZEG00005007477	tsr1	100	73.077	ENSPKIG00000013972	tsr1	100	73.438	Paramormyrops_kingsleyae
ENSMZEG00005007477	tsr1	87	56.061	ENSPSIG00000018258	TSR1	99	55.055	Pelodiscus_sinensis
ENSMZEG00005007477	tsr1	99	82.246	ENSPMGG00000011577	tsr1	99	82.126	Periophthalmus_magnuspinnatus
ENSMZEG00005007477	tsr1	99	54.424	ENSPEMG00000018033	Tsr1	99	54.172	Peromyscus_maniculatus_bairdii
ENSMZEG00005007477	tsr1	99	56.086	ENSPCIG00000009357	TSR1	97	56.124	Phascolarctos_cinereus
ENSMZEG00005007477	tsr1	100	83.413	ENSPFOG00000004483	TSR1	100	84.135	Poecilia_formosa
ENSMZEG00005007477	tsr1	100	83.154	ENSPLAG00000022320	tsr1	99	83.751	Poecilia_latipinna
ENSMZEG00005007477	tsr1	100	83.274	ENSPMEG00000004577	tsr1	99	83.871	Poecilia_mexicana
ENSMZEG00005007477	tsr1	97	84.256	ENSPREG00000010354	tsr1	96	84.889	Poecilia_reticulata
ENSMZEG00005007477	tsr1	98	50.971	ENSPPYG00000007792	TSR1	98	50.607	Pongo_abelii
ENSMZEG00005007477	tsr1	51	62.791	ENSPCAG00000012973	-	70	63.415	Procavia_capensis
ENSMZEG00005007477	tsr1	99	55.327	ENSPCOG00000017928	TSR1	99	55.985	Propithecus_coquereli
ENSMZEG00005007477	tsr1	99	55.636	ENSPVAG00000002162	TSR1	99	55.758	Pteropus_vampyrus
ENSMZEG00005007477	tsr1	100	98.554	ENSPNYG00000016163	tsr1	99	98.554	Pundamilia_nyererei
ENSMZEG00005007477	tsr1	100	75.505	ENSPNAG00000008659	tsr1	100	75.743	Pygocentrus_nattereri
ENSMZEG00005007477	tsr1	99	53.461	ENSRNOG00000002980	Tsr1	99	54.567	Rattus_norvegicus
ENSMZEG00005007477	tsr1	99	55.596	ENSRBIG00000040016	TSR1	99	55.396	Rhinopithecus_bieti
ENSMZEG00005007477	tsr1	99	55.355	ENSRROG00000030361	TSR1	99	55.156	Rhinopithecus_roxellana
ENSMZEG00005007477	tsr1	98	55.732	ENSSBOG00000020785	TSR1	98	55.839	Saimiri_boliviensis_boliviensis
ENSMZEG00005007477	tsr1	99	56.731	ENSSHAG00000011394	TSR1	99	56.611	Sarcophilus_harrisii
ENSMZEG00005007477	tsr1	100	75.181	ENSSFOG00015005455	tsr1	100	74.760	Scleropages_formosus
ENSMZEG00005007477	tsr1	100	83.732	ENSSMAG00000009504	tsr1	100	85.167	Scophthalmus_maximus
ENSMZEG00005007477	tsr1	100	87.709	ENSSDUG00000012074	tsr1	99	88.305	Seriola_dumerili
ENSMZEG00005007477	tsr1	100	87.679	ENSSLDG00000002031	tsr1	99	88.278	Seriola_lalandi_dorsalis
ENSMZEG00005007477	tsr1	92	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSMZEG00005007477	tsr1	100	57.807	ENSSPUG00000007042	TSR1	99	57.590	Sphenodon_punctatus
ENSMZEG00005007477	tsr1	100	86.993	ENSSPAG00000021951	tsr1	100	87.619	Stegastes_partitus
ENSMZEG00005007477	tsr1	99	56.851	ENSSSCG00000038534	TSR1	99	56.235	Sus_scrofa
ENSMZEG00005007477	tsr1	90	60.963	ENSTGUG00000005883	TSR1	100	58.910	Taeniopygia_guttata
ENSMZEG00005007477	tsr1	100	83.173	ENSTRUG00000004665	tsr1	100	83.053	Takifugu_rubripes
ENSMZEG00005007477	tsr1	99	82.225	ENSTNIG00000016196	tsr1	100	82.709	Tetraodon_nigroviridis
ENSMZEG00005007477	tsr1	67	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSMZEG00005007477	tsr1	99	56.727	ENSTTRG00000001177	TSR1	99	56.333	Tursiops_truncatus
ENSMZEG00005007477	tsr1	99	54.819	ENSUAMG00000025160	TSR1	99	54.676	Ursus_americanus
ENSMZEG00005007477	tsr1	96	55.168	ENSUMAG00000009294	TSR1	98	54.907	Ursus_maritimus
ENSMZEG00005007477	tsr1	83	51.076	ENSVPAG00000000228	TSR1	99	50.714	Vicugna_pacos
ENSMZEG00005007477	tsr1	99	55.716	ENSVVUG00000021767	TSR1	99	55.436	Vulpes_vulpes
ENSMZEG00005007477	tsr1	99	52.682	ENSXETG00000023797	tsr1	100	52.230	Xenopus_tropicalis
ENSMZEG00005007477	tsr1	100	83.153	ENSXCOG00000009635	tsr1	100	83.153	Xiphophorus_couchianus
ENSMZEG00005007477	tsr1	100	83.453	ENSXMAG00000001397	tsr1	97	83.933	Xiphophorus_maculatus