EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005007551 (Gene tree)
Gene ID
101468816
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Minus strand
Length
33044 bases
Position
chrLG14:25437503-25470546
Accession
101468816
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005010016tRNA_anti-codonPF01336.258.6e-1211
ENSMZEP00005010000tRNA_anti-codonPF01336.259.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005010382-1734-ENSMZEP00005010016577 (aa)--
ENSMZET00005010366-2958XM_004558166ENSMZEP00005010000602 (aa)XP_004558223UPI000329BC9A
Gene Model
Click here to download ENSMZEG00005007551's gene model file
Pathways
Pathway IDPathway NameSource
mze03030DNA replicationKEGG
mze03420Nucleotide excision repairKEGG
mze03430Mismatch repairKEGG
mze03440Homologous recombinationKEGG
mze03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007551's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005007551rpa19470.362ENSAPOG00000019409RPA18870.362Acanthochromis_polyacanthus
ENSMZEG00005007551rpa19988.186ENSAPOG00000011658rpa110088.186Acanthochromis_polyacanthus
ENSMZEG00005007551rpa19963.072ENSAMEG00000007706RPA19963.072Ailuropoda_melanoleuca
ENSMZEG00005007551rpa19960.900ENSACIG00000012881RPA19962.862Amphilophus_citrinellus
ENSMZEG00005007551rpa19684.602ENSACIG00000007277rpa110084.602Amphilophus_citrinellus
ENSMZEG00005007551rpa19989.185ENSAOCG00000023376rpa110089.185Amphiprion_ocellaris
ENSMZEG00005007551rpa19958.887ENSAOCG00000009003RPA19959.070Amphiprion_ocellaris
ENSMZEG00005007551rpa18871.734ENSAPEG00000019132RPA19958.030Amphiprion_percula
ENSMZEG00005007551rpa19989.185ENSAPEG00000008634rpa110089.185Amphiprion_percula
ENSMZEG00005007551rpa19960.896ENSATEG00000006443RPA19960.896Anabas_testudineus
ENSMZEG00005007551rpa19587.719ENSATEG00000022024rpa19987.719Anabas_testudineus
ENSMZEG00005007551rpa19855.473ENSAPLG00000012442RPA110055.982Anas_platyrhynchos
ENSMZEG00005007551rpa19958.113ENSACAG00000014490RPA19859.008Anolis_carolinensis
ENSMZEG00005007551rpa19961.340ENSANAG00000023456RPA19864.081Aotus_nancymaae
ENSMZEG00005007551rpa19495.398ENSACLG00000006640rpa110095.398Astatotilapia_calliptera
ENSMZEG00005007551rpa19963.150ENSACLG00000005223RPA19963.150Astatotilapia_calliptera
ENSMZEG00005007551rpa19979.466ENSAMXG00000008418rpa19979.633Astyanax_mexicanus
ENSMZEG00005007551rpa19962.684ENSBTAG00000009711RPA19962.684Bos_taurus
ENSMZEG00005007551rpa17332.477WBGene00017546rpa-16432.477Caenorhabditis_elegans
ENSMZEG00005007551rpa19961.564ENSCJAG00000001848RPA19962.092Callithrix_jacchus
ENSMZEG00005007551rpa19963.011ENSCAFG00000019249RPA19963.339Canis_familiaris
ENSMZEG00005007551rpa19963.011ENSCAFG00020009847RPA19963.339Canis_lupus_dingo
ENSMZEG00005007551rpa19962.643ENSCHIG00000026308RPA19963.175Capra_hircus
ENSMZEG00005007551rpa19962.378ENSTSYG00000003482-9962.378Carlito_syrichta
ENSMZEG00005007551rpa19962.927ENSCPOG00000000035RPA19962.927Cavia_porcellus
ENSMZEG00005007551rpa19952.026ENSCCAG00000010981RPA19952.520Cebus_capucinus
ENSMZEG00005007551rpa19959.283ENSCLAG00000015045-9959.283Chinchilla_lanigera
ENSMZEG00005007551rpa19962.927ENSCLAG00000005185-9962.927Chinchilla_lanigera
ENSMZEG00005007551rpa19953.409ENSCSAG00000013833RPA19953.409Chlorocebus_sabaeus
ENSMZEG00005007551rpa17271.330ENSCHOG00000009454-9971.330Choloepus_hoffmanni
ENSMZEG00005007551rpa19959.622ENSCHOG00000013540-9962.818Choloepus_hoffmanni
ENSMZEG00005007551rpa19965.189ENSCPBG00000020377RPA19966.197Chrysemys_picta_bellii
ENSMZEG00005007551rpa19944.776ENSCING00000023482-9944.776Ciona_intestinalis
ENSMZEG00005007551rpa19863.514ENSCANG00000030911RPA19963.514Colobus_angolensis_palliatus
ENSMZEG00005007551rpa19962.643ENSCGRG00001008197Rpa19962.643Cricetulus_griseus_chok1gshd
ENSMZEG00005007551rpa18661.538ENSCGRG00000000582Rpa19965.020Cricetulus_griseus_crigri
ENSMZEG00005007551rpa19957.051ENSCSEG00000012726RPA19958.662Cynoglossus_semilaevis
ENSMZEG00005007551rpa19981.353ENSCSEG00000013066rpa19981.353Cynoglossus_semilaevis
ENSMZEG00005007551rpa19558.631ENSCVAG00000013446-9658.631Cyprinodon_variegatus
ENSMZEG00005007551rpa19985.644ENSCVAG00000019431rpa19985.809Cyprinodon_variegatus
ENSMZEG00005007551rpa19976.962ENSDARG00000003938rpa19976.962Danio_rerio
ENSMZEG00005007551rpa19863.516ENSDNOG00000017218RPA19863.516Dasypus_novemcinctus
ENSMZEG00005007551rpa19963.339ENSDORG00000006199Rpa19963.953Dipodomys_ordii
ENSMZEG00005007551rpa19940.946FBgn0010173RpA-709941.667Drosophila_melanogaster
ENSMZEG00005007551rpa18274.227ENSETEG00000017608RPA18272.000Echinops_telfairi
ENSMZEG00005007551rpa19862.775ENSEASG00005009372RPA19964.437Equus_asinus_asinus
ENSMZEG00005007551rpa19963.175ENSECAG00000023886RPA19963.339Equus_caballus
ENSMZEG00005007551rpa17270.883ENSEEUG00000002186-6870.883Erinaceus_europaeus
ENSMZEG00005007551rpa19462.983ENSELUG00000006136RPA19964.098Esox_lucius
ENSMZEG00005007551rpa19980.858ENSELUG00000021071rpa19980.858Esox_lucius
ENSMZEG00005007551rpa19963.562ENSFCAG00000006306RPA19963.562Felis_catus
ENSMZEG00005007551rpa19963.725ENSFALG00000006575RPA19963.725Ficedula_albicollis
ENSMZEG00005007551rpa19963.725ENSFDAG00000007720RPA19963.725Fukomys_damarensis
ENSMZEG00005007551rpa19985.430ENSFHEG00000003580rpa19985.430Fundulus_heteroclitus
ENSMZEG00005007551rpa19976.717ENSGMOG00000010382rpa19976.717Gadus_morhua
ENSMZEG00005007551rpa19962.890ENSGALG00000003072RPA19962.890Gallus_gallus
ENSMZEG00005007551rpa19958.671ENSGAFG00000020953RPA19958.994Gambusia_affinis
ENSMZEG00005007551rpa19985.500ENSGAFG00000012916rpa19985.500Gambusia_affinis
ENSMZEG00005007551rpa19984.551ENSGACG00000010856rpa19984.551Gasterosteus_aculeatus
ENSMZEG00005007551rpa19964.696ENSGAGG00000013611RPA19964.696Gopherus_agassizii
ENSMZEG00005007551rpa19963.228ENSGGOG00000014186RPA19963.228Gorilla_gorilla
ENSMZEG00005007551rpa110099.336ENSHBUG00000017773rpa110099.336Haplochromis_burtoni
ENSMZEG00005007551rpa19954.872ENSHBUG00000009348RPA19858.131Haplochromis_burtoni
ENSMZEG00005007551rpa19963.072ENSHGLG00000008846RPA19963.235Heterocephalus_glaber_female
ENSMZEG00005007551rpa19963.072ENSHGLG00100017755-9963.235Heterocephalus_glaber_male
ENSMZEG00005007551rpa19958.824ENSHGLG00100000799-9958.824Heterocephalus_glaber_male
ENSMZEG00005007551rpa19953.922ENSHGLG00100002005-9953.922Heterocephalus_glaber_male
ENSMZEG00005007551rpa19945.611ENSHCOG00000000351RPA19944.737Hippocampus_comes
ENSMZEG00005007551rpa19975.163ENSHCOG00000001401rpa19975.163Hippocampus_comes
ENSMZEG00005007551rpa19978.182ENSIPUG00000004400rpa19978.182Ictalurus_punctatus
ENSMZEG00005007551rpa19759.162ENSSTOG00000022475RPA19562.500Ictidomys_tridecemlineatus
ENSMZEG00005007551rpa19961.815ENSJJAG00000000876Rpa19864.467Jaculus_jaculus
ENSMZEG00005007551rpa19982.979ENSKMAG00000005605rpa19983.142Kryptolebias_marmoratus
ENSMZEG00005007551rpa19961.120ENSKMAG00000000234RPA19961.120Kryptolebias_marmoratus
ENSMZEG00005007551rpa19985.124ENSLBEG00000021604rpa110085.124Labrus_bergylta
ENSMZEG00005007551rpa19771.789ENSLBEG00000002281RPA18371.789Labrus_bergylta
ENSMZEG00005007551rpa18061.885ENSLACG00000007210RPA19961.885Latimeria_chalumnae
ENSMZEG00005007551rpa19973.719ENSLOCG00000006397rpa19973.884Lepisosteus_oculatus
ENSMZEG00005007551rpa19961.774ENSLAFG00000015354RPA19961.774Loxodonta_africana
ENSMZEG00005007551rpa18260.792ENSMFAG00000036138-9960.792Macaca_fascicularis
ENSMZEG00005007551rpa19958.155ENSMMUG00000002442-9958.155Macaca_mulatta
ENSMZEG00005007551rpa19863.123ENSMMUG00000011604-9963.516Macaca_mulatta
ENSMZEG00005007551rpa19955.058ENSMNEG00000029837-9955.058Macaca_nemestrina
ENSMZEG00005007551rpa19960.959ENSMNEG00000031632-9863.729Macaca_nemestrina
ENSMZEG00005007551rpa19859.669ENSMLEG00000038768-9960.165Mandrillus_leucophaeus
ENSMZEG00005007551rpa19772.093ENSMAMG00000020097RPA19958.171Mastacembelus_armatus
ENSMZEG00005007551rpa19990.000ENSMAMG00000017993rpa19990.000Mastacembelus_armatus
ENSMZEG00005007551rpa19963.150ENSMZEG00005024731RPA19963.150Maylandia_zebra
ENSMZEG00005007551rpa19962.314ENSMGAG00000005315RPA19862.314Meleagris_gallopavo
ENSMZEG00005007551rpa19961.207ENSMAUG00000010474Rpa19963.333Mesocricetus_auratus
ENSMZEG00005007551rpa19963.607ENSMICG00000012867RPA19963.607Microcebus_murinus
ENSMZEG00005007551rpa19963.054ENSMOCG00000013019Rpa19963.054Microtus_ochrogaster
ENSMZEG00005007551rpa19983.667ENSMMOG00000014292rpa19985.862Mola_mola
ENSMZEG00005007551rpa19862.500ENSMMOG00000010868RPA19862.500Mola_mola
ENSMZEG00005007551rpa19962.439ENSMODG00000010549RPA19962.439Monodelphis_domestica
ENSMZEG00005007551rpa19989.333ENSMALG00000011453rpa19989.333Monopterus_albus
ENSMZEG00005007551rpa19972.311ENSMALG00000001208RPA18672.311Monopterus_albus
ENSMZEG00005007551rpa19963.235MGP_CAROLIEiJ_G0016734Rpa19963.502Mus_caroli
ENSMZEG00005007551rpa19962.621ENSMUSG00000000751Rpa19962.885Mus_musculus
ENSMZEG00005007551rpa19963.252MGP_PahariEiJ_G0017871Rpa19963.518Mus_pahari
ENSMZEG00005007551rpa19962.520MGP_SPRETEiJ_G0017577Rpa19962.783Mus_spretus
ENSMZEG00005007551rpa19963.830ENSMPUG00000013119RPA19963.830Mustela_putorius_furo
ENSMZEG00005007551rpa19962.237ENSMLUG00000006113RPA19962.237Myotis_lucifugus
ENSMZEG00005007551rpa19763.652ENSNGAG00000004522Rpa19563.652Nannospalax_galili
ENSMZEG00005007551rpa19595.096ENSNBRG00000020595rpa110095.096Neolamprologus_brichardi
ENSMZEG00005007551rpa19861.037ENSNBRG00000009672RPA19761.037Neolamprologus_brichardi
ENSMZEG00005007551rpa19963.029ENSNLEG00000017149RPA19962.969Nomascus_leucogenys
ENSMZEG00005007551rpa19951.986ENSMEUG00000006714RPA19754.653Notamacropus_eugenii
ENSMZEG00005007551rpa19960.406ENSODEG00000009038RPA19763.043Octodon_degus
ENSMZEG00005007551rpa110096.580ENSONIG00000013135rpa19996.580Oreochromis_niloticus
ENSMZEG00005007551rpa19863.847ENSOANG00000010880RPA19963.847Ornithorhynchus_anatinus
ENSMZEG00005007551rpa19960.686ENSOCUG00000001504RPA19960.686Oryctolagus_cuniculus
ENSMZEG00005007551rpa19957.846ENSORLG00000003368RPA19957.846Oryzias_latipes
ENSMZEG00005007551rpa19985.643ENSORLG00000004856rpa19985.643Oryzias_latipes
ENSMZEG00005007551rpa19667.778ENSORLG00020015284RPA18767.778Oryzias_latipes_hni
ENSMZEG00005007551rpa19985.810ENSORLG00020008980rpa19985.810Oryzias_latipes_hni
ENSMZEG00005007551rpa19958.216ENSORLG00015020383RPA19958.216Oryzias_latipes_hsok
ENSMZEG00005007551rpa19985.810ENSORLG00015013982rpa19985.810Oryzias_latipes_hsok
ENSMZEG00005007551rpa16967.225ENSORLG00015005867-9667.225Oryzias_latipes_hsok
ENSMZEG00005007551rpa19982.304ENSOMEG00000004704rpa19982.304Oryzias_melastigma
ENSMZEG00005007551rpa19957.913ENSOMEG00000011040RPA19960.209Oryzias_melastigma
ENSMZEG00005007551rpa17575.824ENSOGAG00000029379-9875.824Otolemur_garnettii
ENSMZEG00005007551rpa19963.072ENSOGAG00000005581-9963.072Otolemur_garnettii
ENSMZEG00005007551rpa19962.643ENSOARG00000014479RPA19963.175Ovis_aries
ENSMZEG00005007551rpa19963.192ENSPPAG00000039680RPA19963.132Pan_paniscus
ENSMZEG00005007551rpa19963.399ENSPPRG00000011807RPA19963.399Panthera_pardus
ENSMZEG00005007551rpa19963.399ENSPTIG00000007898RPA19963.399Panthera_tigris_altaica
ENSMZEG00005007551rpa19963.518ENSPTRG00000008539RPA19963.458Pan_troglodytes
ENSMZEG00005007551rpa19962.908ENSPANG00000024592RPA19963.295Papio_anubis
ENSMZEG00005007551rpa19974.876ENSPKIG00000008053rpa19875.372Paramormyrops_kingsleyae
ENSMZEG00005007551rpa19665.203ENSPSIG00000015617RPA19865.203Pelodiscus_sinensis
ENSMZEG00005007551rpa19958.852ENSPMGG00000000543RPA19963.082Periophthalmus_magnuspinnatus
ENSMZEG00005007551rpa19981.970ENSPMGG00000011589rpa19981.970Periophthalmus_magnuspinnatus
ENSMZEG00005007551rpa19963.547ENSPEMG00000021061Rpa19963.547Peromyscus_maniculatus_bairdii
ENSMZEG00005007551rpa19962.276ENSPCIG00000019049RPA19962.316Phascolarctos_cinereus
ENSMZEG00005007551rpa19986.500ENSPFOG00000003987rpa19986.500Poecilia_formosa
ENSMZEG00005007551rpa19986.333ENSPLAG00000004984rpa19986.333Poecilia_latipinna
ENSMZEG00005007551rpa19459.483ENSPLAG00000008844-9659.187Poecilia_latipinna
ENSMZEG00005007551rpa19986.667ENSPMEG00000020602rpa19986.667Poecilia_mexicana
ENSMZEG00005007551rpa19458.692ENSPMEG00000003627-9658.833Poecilia_mexicana
ENSMZEG00005007551rpa19379.070ENSPREG00000010174rpa19578.929Poecilia_reticulata
ENSMZEG00005007551rpa19271.854ENSPREG00000010119RPA18271.854Poecilia_reticulata
ENSMZEG00005007551rpa19963.235ENSPCOG00000001799RPA19963.235Propithecus_coquereli
ENSMZEG00005007551rpa19961.889ENSPVAG00000002149RPA19961.889Pteropus_vampyrus
ENSMZEG00005007551rpa19962.992ENSPNYG00000024165RPA19962.992Pundamilia_nyererei
ENSMZEG00005007551rpa110099.668ENSPNYG00000016316rpa110099.668Pundamilia_nyererei
ENSMZEG00005007551rpa19969.916ENSPNAG00000008599rpa19671.853Pygocentrus_nattereri
ENSMZEG00005007551rpa19970.874ENSRNOG00000003123Rpa19964.039Rattus_norvegicus
ENSMZEG00005007551rpa19962.541ENSRBIG00000036587RPA19962.541Rhinopithecus_bieti
ENSMZEG00005007551rpa19957.655ENSRROG00000043278RPA19957.655Rhinopithecus_roxellana
ENSMZEG00005007551rpa19431.570YAR007CRFA19331.570Saccharomyces_cerevisiae
ENSMZEG00005007551rpa19761.296ENSSBOG00000030233RPA19765.000Saimiri_boliviensis_boliviensis
ENSMZEG00005007551rpa19962.193ENSSHAG00000007969RPA19862.848Sarcophilus_harrisii
ENSMZEG00005007551rpa19980.929ENSSFOG00015005362rpa19280.929Scleropages_formosus
ENSMZEG00005007551rpa18671.259ENSSMAG00000019746RPA19957.839Scophthalmus_maximus
ENSMZEG00005007551rpa19990.500ENSSDUG00000011949rpa19990.500Seriola_dumerili
ENSMZEG00005007551rpa19471.734ENSSDUG00000016358RPA19172.374Seriola_dumerili
ENSMZEG00005007551rpa19271.991ENSSLDG00000020784RPA19171.689Seriola_lalandi_dorsalis
ENSMZEG00005007551rpa19990.833ENSSLDG00000011806rpa19990.833Seriola_lalandi_dorsalis
ENSMZEG00005007551rpa18778.788ENSSARG00000007506RPA18978.788Sorex_araneus
ENSMZEG00005007551rpa19663.203ENSSPUG00000007223RPA19863.203Sphenodon_punctatus
ENSMZEG00005007551rpa19964.081ENSSPAG00000011165RPA19964.081Stegastes_partitus
ENSMZEG00005007551rpa19990.500ENSSPAG00000009903rpa19990.500Stegastes_partitus
ENSMZEG00005007551rpa19962.895ENSSSCG00000017822RPA19963.289Sus_scrofa
ENSMZEG00005007551rpa19963.115ENSTGUG00000005775RPA19963.115Taeniopygia_guttata
ENSMZEG00005007551rpa19983.500ENSTRUG00000003616rpa19983.500Takifugu_rubripes
ENSMZEG00005007551rpa19971.495ENSTRUG00000000405RPA19171.101Takifugu_rubripes
ENSMZEG00005007551rpa19984.943ENSTNIG00000016199rpa19985.222Tetraodon_nigroviridis
ENSMZEG00005007551rpa17370.909ENSTBEG00000002709RPA17470.909Tupaia_belangeri
ENSMZEG00005007551rpa19962.153ENSTTRG00000001169RPA19962.520Tursiops_truncatus
ENSMZEG00005007551rpa18975.000ENSUAMG00000015676RPA19775.000Ursus_americanus
ENSMZEG00005007551rpa19962.895ENSUMAG00000009328RPA19962.908Ursus_maritimus
ENSMZEG00005007551rpa19961.412ENSVPAG00000009443RPA19961.412Vicugna_pacos
ENSMZEG00005007551rpa19962.848ENSVVUG00000021715RPA19963.175Vulpes_vulpes
ENSMZEG00005007551rpa19966.612ENSXETG00000013538rpa19968.212Xenopus_tropicalis
ENSMZEG00005007551rpa19960.696ENSXCOG00000009899-9962.892Xiphophorus_couchianus
ENSMZEG00005007551rpa19384.794ENSXCOG00000010068rpa19484.794Xiphophorus_couchianus
ENSMZEG00005007551rpa19984.667ENSXMAG00000004102rpa19985.663Xiphophorus_maculatus
ENSMZEG00005007551rpa19372.082ENSXMAG00000010333RPA18072.082Xiphophorus_maculatus

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