EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007558 (Gene tree)
Gene ID: 101467340
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 12329 bases
Position: chrLG7:53657558-53669886
Accession: 101467340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009959	CBFNT	PF08143.11	4.5e-06	1	1
ENSMZEP00005009966	CBFNT	PF08143.11	4.5e-06	1	1
ENSMZEP00005009959	RRM_1	PF00076.22	8.2e-34	1	2
ENSMZEP00005009959	RRM_1	PF00076.22	8.2e-34	2	2
ENSMZEP00005009966	RRM_1	PF00076.22	8.2e-34	1	2
ENSMZEP00005009966	RRM_1	PF00076.22	8.2e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010332	-	1869	XM_012923482	ENSMZEP00005009966	316 (aa)	XP_012778936	UPI00022B4744
ENSMZET00005010325	-	4621	XM_012923483	ENSMZEP00005009959	316 (aa)	XP_012778937	UPI00022B4744

Gene Model

Click here to download ENSMZEG00005007558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007558	hnrnpd	94	84.229	ENSG00000138668	HNRNPD	100	91.892	Homo_sapiens
ENSMZEG00005007558	hnrnpd	100	98.423	ENSAPOG00000006184	hnrnpd	100	98.423	Acanthochromis_polyacanthus
ENSMZEG00005007558	hnrnpd	94	79.125	ENSAMEG00000005158	HNRNPD	96	78.571	Ailuropoda_melanoleuca
ENSMZEG00005007558	hnrnpd	94	98.986	ENSACIG00000008353	hnrnpd	96	98.986	Amphilophus_citrinellus
ENSMZEG00005007558	hnrnpd	100	98.107	ENSAOCG00000014191	hnrnpd	100	98.107	Amphiprion_ocellaris
ENSMZEG00005007558	hnrnpd	100	98.107	ENSAPEG00000005603	hnrnpd	100	98.107	Amphiprion_percula
ENSMZEG00005007558	hnrnpd	100	96.845	ENSATEG00000007097	hnrnpd	100	96.845	Anabas_testudineus
ENSMZEG00005007558	hnrnpd	94	85.000	ENSACAG00000010342	HNRNPD	100	84.231	Anolis_carolinensis
ENSMZEG00005007558	hnrnpd	94	84.229	ENSANAG00000035221	HNRNPD	82	85.971	Aotus_nancymaae
ENSMZEG00005007558	hnrnpd	99	100.000	ENSACLG00000026497	hnrnpd	100	100.000	Astatotilapia_calliptera
ENSMZEG00005007558	hnrnpd	100	100.000	ENSACLG00000025213	hnrnpd	100	100.000	Astatotilapia_calliptera
ENSMZEG00005007558	hnrnpd	100	86.076	ENSAMXG00000001477	hnrnpd	100	85.443	Astyanax_mexicanus
ENSMZEG00005007558	hnrnpd	94	78.859	ENSBTAG00000013952	HNRNPD	86	78.571	Bos_taurus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSCJAG00000015165	HNRNPD	82	85.971	Callithrix_jacchus
ENSMZEG00005007558	hnrnpd	94	78.859	ENSCAFG00000025045	HNRNPD	86	78.571	Canis_familiaris
ENSMZEG00005007558	hnrnpd	94	78.859	ENSCAFG00020010713	HNRNPD	86	78.571	Canis_lupus_dingo
ENSMZEG00005007558	hnrnpd	94	84.229	ENSCHIG00000022317	HNRNPD	85	83.737	Capra_hircus
ENSMZEG00005007558	hnrnpd	89	81.951	ENSTSYG00000010395	HNRNPD	100	83.902	Carlito_syrichta
ENSMZEG00005007558	hnrnpd	94	70.408	ENSCPOG00000040484	HNRNPD	87	71.769	Cavia_porcellus
ENSMZEG00005007558	hnrnpd	63	59.701	ENSCCAG00000021563	-	71	65.714	Cebus_capucinus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSCCAG00000024528	HNRNPD	82	85.971	Cebus_capucinus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSCATG00000039829	HNRNPD	82	85.971	Cercocebus_atys
ENSMZEG00005007558	hnrnpd	94	84.532	ENSCLAG00000006540	HNRNPD	92	85.971	Chinchilla_lanigera
ENSMZEG00005007558	hnrnpd	94	78.859	ENSCSAG00000004463	HNRNPD	83	80.471	Chlorocebus_sabaeus
ENSMZEG00005007558	hnrnpd	94	81.919	ENSCHOG00000000045	HNRNPD	98	83.395	Choloepus_hoffmanni
ENSMZEG00005007558	hnrnpd	94	84.249	ENSCPBG00000008025	HNRNPD	86	83.333	Chrysemys_picta_bellii
ENSMZEG00005007558	hnrnpd	94	84.588	ENSCANG00000018501	HNRNPD	82	86.331	Colobus_angolensis_palliatus
ENSMZEG00005007558	hnrnpd	94	84.588	ENSCGRG00001014634	Hnrnpd	86	84.429	Cricetulus_griseus_chok1gshd
ENSMZEG00005007558	hnrnpd	94	82.288	ENSCGRG00000007563	Hnrnpd	96	83.150	Cricetulus_griseus_crigri
ENSMZEG00005007558	hnrnpd	100	89.028	ENSCSEG00000010909	hnrnpd	100	84.326	Cynoglossus_semilaevis
ENSMZEG00005007558	hnrnpd	100	93.375	ENSCVAG00000019790	hnrnpd	100	93.375	Cyprinodon_variegatus
ENSMZEG00005007558	hnrnpd	100	85.849	ENSDARG00000059246	hnrnpd	100	85.489	Danio_rerio
ENSMZEG00005007558	hnrnpd	94	82.288	ENSDNOG00000013830	-	76	83.764	Dasypus_novemcinctus
ENSMZEG00005007558	hnrnpd	68	72.558	ENSDNOG00000045079	-	70	72.897	Dasypus_novemcinctus
ENSMZEG00005007558	hnrnpd	56	73.864	ENSDNOG00000041055	-	69	73.864	Dasypus_novemcinctus
ENSMZEG00005007558	hnrnpd	94	84.532	ENSDORG00000012507	Hnrnpd	99	83.793	Dipodomys_ordii
ENSMZEG00005007558	hnrnpd	94	79.452	ENSETEG00000016709	HNRNPD	86	79.221	Echinops_telfairi
ENSMZEG00005007558	hnrnpd	94	84.229	ENSEASG00005016278	HNRNPD	85	83.737	Equus_asinus_asinus
ENSMZEG00005007558	hnrnpd	94	78.859	ENSECAG00000009344	HNRNPD	86	78.571	Equus_caballus
ENSMZEG00005007558	hnrnpd	94	71.477	ENSEEUG00000007552	HNRNPD	86	69.481	Erinaceus_europaeus
ENSMZEG00005007558	hnrnpd	78	80.478	ENSELUG00000003230	hnrnpd	82	82.449	Esox_lucius
ENSMZEG00005007558	hnrnpd	94	84.229	ENSFCAG00000027404	HNRNPD	86	78.571	Felis_catus
ENSMZEG00005007558	hnrnpd	94	84.532	ENSFALG00000005716	HNRNPD	87	83.737	Ficedula_albicollis
ENSMZEG00005007558	hnrnpd	94	82.288	ENSFDAG00000007958	HNRNPD	81	83.516	Fukomys_damarensis
ENSMZEG00005007558	hnrnpd	100	89.905	ENSFHEG00000006838	hnrnpd	100	93.060	Fundulus_heteroclitus
ENSMZEG00005007558	hnrnpd	100	78.750	ENSGMOG00000018481	hnrnpd	100	76.687	Gadus_morhua
ENSMZEG00005007558	hnrnpd	94	84.615	ENSGALG00000011184	HNRNPD	100	86.154	Gallus_gallus
ENSMZEG00005007558	hnrnpd	100	90.625	ENSGAFG00000003714	hnrnpd	100	90.000	Gambusia_affinis
ENSMZEG00005007558	hnrnpd	100	86.687	ENSGACG00000015669	hnrnpd	100	89.474	Gasterosteus_aculeatus
ENSMZEG00005007558	hnrnpd	86	77.397	ENSGAGG00000003656	HNRNPD	93	75.625	Gopherus_agassizii
ENSMZEG00005007558	hnrnpd	94	84.674	ENSGGOG00000026760	HNRNPD	94	86.207	Gorilla_gorilla
ENSMZEG00005007558	hnrnpd	100	99.684	ENSHBUG00000011794	hnrnpd	100	99.684	Haplochromis_burtoni
ENSMZEG00005007558	hnrnpd	94	84.532	ENSHGLG00000004214	HNRNPD	82	86.331	Heterocephalus_glaber_female
ENSMZEG00005007558	hnrnpd	94	84.674	ENSHGLG00100005996	HNRNPD	100	86.538	Heterocephalus_glaber_male
ENSMZEG00005007558	hnrnpd	100	83.648	ENSHCOG00000000087	hnrnpd	97	83.648	Hippocampus_comes
ENSMZEG00005007558	hnrnpd	98	84.566	ENSIPUG00000024954	hnrnpd	99	83.923	Ictalurus_punctatus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSSTOG00000013970	HNRNPD	88	81.333	Ictidomys_tridecemlineatus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSJJAG00000023387	Hnrnpd	97	83.737	Jaculus_jaculus
ENSMZEG00005007558	hnrnpd	100	89.274	ENSKMAG00000004310	hnrnpd	100	92.429	Kryptolebias_marmoratus
ENSMZEG00005007558	hnrnpd	100	95.253	ENSLBEG00000027508	hnrnpd	100	95.253	Labrus_bergylta
ENSMZEG00005007558	hnrnpd	95	82.392	ENSLACG00000005306	HNRNPD	94	82.392	Latimeria_chalumnae
ENSMZEG00005007558	hnrnpd	100	82.595	ENSLOCG00000010743	hnrnpd	100	74.684	Lepisosteus_oculatus
ENSMZEG00005007558	hnrnpd	94	82.288	ENSLAFG00000016483	HNRNPD	98	83.150	Loxodonta_africana
ENSMZEG00005007558	hnrnpd	94	84.229	ENSMFAG00000031674	HNRNPD	82	85.971	Macaca_fascicularis
ENSMZEG00005007558	hnrnpd	94	84.229	ENSMNEG00000028199	HNRNPD	82	85.971	Macaca_nemestrina
ENSMZEG00005007558	hnrnpd	94	84.229	ENSMLEG00000028370	HNRNPD	82	85.971	Mandrillus_leucophaeus
ENSMZEG00005007558	hnrnpd	100	96.203	ENSMAMG00000004971	hnrnpd	100	96.203	Mastacembelus_armatus
ENSMZEG00005007558	hnrnpd	94	84.674	ENSMGAG00000008051	HNRNPD	100	86.207	Meleagris_gallopavo
ENSMZEG00005007558	hnrnpd	88	84.588	ENSMAUG00000008830	Hnrnpd	93	79.487	Mesocricetus_auratus
ENSMZEG00005007558	hnrnpd	94	84.982	ENSMICG00000010984	HNRNPD	90	84.138	Microcebus_murinus
ENSMZEG00005007558	hnrnpd	94	84.588	ENSMOCG00000021398	Hnrnpd	85	84.429	Microtus_ochrogaster
ENSMZEG00005007558	hnrnpd	100	91.167	ENSMMOG00000008627	hnrnpd	100	91.167	Mola_mola
ENSMZEG00005007558	hnrnpd	88	78.667	ENSMODG00000011898	HNRNPD	81	78.641	Monodelphis_domestica
ENSMZEG00005007558	hnrnpd	100	91.483	ENSMALG00000016024	hnrnpd	100	94.637	Monopterus_albus
ENSMZEG00005007558	hnrnpd	94	84.588	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	96.000	Mus_caroli
ENSMZEG00005007558	hnrnpd	94	84.588	ENSMUSG00000000568	Hnrnpd	100	96.000	Mus_musculus
ENSMZEG00005007558	hnrnpd	94	84.588	MGP_PahariEiJ_G0017224	Hnrnpd	100	96.000	Mus_pahari
ENSMZEG00005007558	hnrnpd	94	84.588	MGP_SPRETEiJ_G0028443	Hnrnpd	100	96.000	Mus_spretus
ENSMZEG00005007558	hnrnpd	94	82.288	ENSMPUG00000014782	HNRNPD	98	83.764	Mustela_putorius_furo
ENSMZEG00005007558	hnrnpd	94	71.812	ENSMLUG00000010628	HNRNPD	86	72.078	Myotis_lucifugus
ENSMZEG00005007558	hnrnpd	88	84.588	ENSNGAG00000013451	Hnrnpd	93	79.487	Nannospalax_galili
ENSMZEG00005007558	hnrnpd	100	99.367	ENSNBRG00000019548	hnrnpd	100	99.367	Neolamprologus_brichardi
ENSMZEG00005007558	hnrnpd	94	84.727	ENSNLEG00000008600	HNRNPD	84	86.182	Nomascus_leucogenys
ENSMZEG00005007558	hnrnpd	68	80.000	ENSMEUG00000006804	-	58	82.424	Notamacropus_eugenii
ENSMZEG00005007558	hnrnpd	94	79.054	ENSOPRG00000009336	HNRNPD	82	78.378	Ochotona_princeps
ENSMZEG00005007558	hnrnpd	88	84.532	ENSODEG00000001897	HNRNPD	97	79.421	Octodon_degus
ENSMZEG00005007558	hnrnpd	100	100.000	ENSONIG00000015390	hnrnpd	100	100.000	Oreochromis_niloticus
ENSMZEG00005007558	hnrnpd	94	84.615	ENSOANG00000001932	HNRNPD	100	86.154	Ornithorhynchus_anatinus
ENSMZEG00005007558	hnrnpd	94	82.288	ENSOCUG00000001357	HNRNPD	98	83.150	Oryctolagus_cuniculus
ENSMZEG00005007558	hnrnpd	100	88.328	ENSORLG00000001833	hnrnpd	100	89.274	Oryzias_latipes
ENSMZEG00005007558	hnrnpd	94	86.159	ENSORLG00020014780	hnrnpd	83	89.273	Oryzias_latipes_hni
ENSMZEG00005007558	hnrnpd	100	88.328	ENSORLG00015002382	hnrnpd	100	89.274	Oryzias_latipes_hsok
ENSMZEG00005007558	hnrnpd	100	84.227	ENSOMEG00000018558	hnrnpd	100	81.703	Oryzias_melastigma
ENSMZEG00005007558	hnrnpd	94	78.859	ENSOGAG00000004075	HNRNPD	83	80.471	Otolemur_garnettii
ENSMZEG00005007558	hnrnpd	94	82.288	ENSOARG00000000579	HNRNPD	98	83.764	Ovis_aries
ENSMZEG00005007558	hnrnpd	96	78.947	ENSPPAG00000035750	HNRNPD	100	83.902	Pan_paniscus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSPPRG00000012258	HNRNPD	85	83.737	Panthera_pardus
ENSMZEG00005007558	hnrnpd	94	82.353	ENSPTIG00000019434	HNRNPD	100	83.737	Panthera_tigris_altaica
ENSMZEG00005007558	hnrnpd	94	84.229	ENSPTRG00000016215	HNRNPD	82	85.971	Pan_troglodytes
ENSMZEG00005007558	hnrnpd	94	84.229	ENSPANG00000011785	HNRNPD	82	85.971	Papio_anubis
ENSMZEG00005007558	hnrnpd	100	86.392	ENSPKIG00000025512	hnrnpd	100	85.443	Paramormyrops_kingsleyae
ENSMZEG00005007558	hnrnpd	77	86.408	ENSPSIG00000017029	HNRNPD	79	89.000	Pelodiscus_sinensis
ENSMZEG00005007558	hnrnpd	95	75.415	ENSPMGG00000017169	hnrnpd	85	81.641	Periophthalmus_magnuspinnatus
ENSMZEG00005007558	hnrnpd	94	78.547	ENSPEMG00000014804	Hnrnpd	90	79.931	Peromyscus_maniculatus_bairdii
ENSMZEG00005007558	hnrnpd	94	83.929	ENSPCIG00000003112	HNRNPD	78	85.357	Phascolarctos_cinereus
ENSMZEG00005007558	hnrnpd	100	90.536	ENSPFOG00000002596	hnrnpd	100	93.691	Poecilia_formosa
ENSMZEG00005007558	hnrnpd	100	90.536	ENSPLAG00000004297	hnrnpd	100	93.691	Poecilia_latipinna
ENSMZEG00005007558	hnrnpd	100	90.536	ENSPMEG00000000152	hnrnpd	100	93.691	Poecilia_mexicana
ENSMZEG00005007558	hnrnpd	93	95.000	ENSPREG00000018081	hnrnpd	95	95.000	Poecilia_reticulata
ENSMZEG00005007558	hnrnpd	94	78.859	ENSPPYG00000014885	HNRNPD	83	80.471	Pongo_abelii
ENSMZEG00005007558	hnrnpd	67	74.016	ENSPPYG00000020411	-	90	70.548	Pongo_abelii
ENSMZEG00005007558	hnrnpd	94	77.592	ENSPCAG00000002182	HNRNPD	83	79.195	Procavia_capensis
ENSMZEG00005007558	hnrnpd	94	84.229	ENSPCOG00000021331	HNRNPD	85	83.737	Propithecus_coquereli
ENSMZEG00005007558	hnrnpd	94	73.154	ENSPVAG00000000003	HNRNPD	86	76.623	Pteropus_vampyrus
ENSMZEG00005007558	hnrnpd	100	99.367	ENSPNYG00000004884	hnrnpd	100	99.367	Pundamilia_nyererei
ENSMZEG00005007558	hnrnpd	100	81.329	ENSPNAG00000016368	hnrnpd	100	76.266	Pygocentrus_nattereri
ENSMZEG00005007558	hnrnpd	94	83.813	ENSRNOG00000002292	Hnrnpd	82	85.252	Rattus_norvegicus
ENSMZEG00005007558	hnrnpd	94	84.229	ENSRBIG00000035345	HNRNPD	82	85.971	Rhinopithecus_bieti
ENSMZEG00005007558	hnrnpd	94	84.229	ENSRROG00000011888	HNRNPD	82	85.971	Rhinopithecus_roxellana
ENSMZEG00005007558	hnrnpd	94	84.229	ENSSBOG00000032881	HNRNPD	82	85.971	Saimiri_boliviensis_boliviensis
ENSMZEG00005007558	hnrnpd	94	82.288	ENSSHAG00000013312	HNRNPD	98	83.764	Sarcophilus_harrisii
ENSMZEG00005007558	hnrnpd	100	85.759	ENSSFOG00015005913	hnrnpd	100	85.759	Scleropages_formosus
ENSMZEG00005007558	hnrnpd	100	88.365	ENSSMAG00000009686	hnrnpd	100	92.453	Scophthalmus_maximus
ENSMZEG00005007558	hnrnpd	100	96.530	ENSSDUG00000010792	hnrnpd	100	96.530	Seriola_dumerili
ENSMZEG00005007558	hnrnpd	100	95.268	ENSSLDG00000015962	hnrnpd	100	95.268	Seriola_lalandi_dorsalis
ENSMZEG00005007558	hnrnpd	94	78.889	ENSSARG00000006883	HNRNPD	98	83.026	Sorex_araneus
ENSMZEG00005007558	hnrnpd	94	84.231	ENSSPUG00000013677	HNRNPD	100	83.462	Sphenodon_punctatus
ENSMZEG00005007558	hnrnpd	100	98.107	ENSSPAG00000021014	hnrnpd	100	98.107	Stegastes_partitus
ENSMZEG00005007558	hnrnpd	94	83.871	ENSSSCG00000009249	HNRNPD	82	85.612	Sus_scrofa
ENSMZEG00005007558	hnrnpd	86	81.164	ENSTGUG00000002858	HNRNPD	93	78.571	Taeniopygia_guttata
ENSMZEG00005007558	hnrnpd	100	87.975	ENSTRUG00000018450	hnrnpd	100	84.177	Takifugu_rubripes
ENSMZEG00005007558	hnrnpd	76	82.158	ENSTNIG00000013499	hnrnpd	92	88.288	Tetraodon_nigroviridis
ENSMZEG00005007558	hnrnpd	94	77.491	ENSTBEG00000002327	HNRNPD	98	78.388	Tupaia_belangeri
ENSMZEG00005007558	hnrnpd	94	78.859	ENSTTRG00000007592	HNRNPD	86	78.571	Tursiops_truncatus
ENSMZEG00005007558	hnrnpd	94	75.244	ENSUAMG00000011374	HNRNPD	83	76.547	Ursus_americanus
ENSMZEG00005007558	hnrnpd	94	82.288	ENSUMAG00000008685	HNRNPD	83	83.764	Ursus_maritimus
ENSMZEG00005007558	hnrnpd	94	84.674	ENSVPAG00000004374	HNRNPD	100	86.207	Vicugna_pacos
ENSMZEG00005007558	hnrnpd	94	78.859	ENSVVUG00000024658	HNRNPD	86	78.571	Vulpes_vulpes
ENSMZEG00005007558	hnrnpd	89	78.136	ENSXETG00000012569	hnrnpd	93	77.061	Xenopus_tropicalis
ENSMZEG00005007558	hnrnpd	93	90.769	ENSXCOG00000017639	hnrnpd	100	94.615	Xiphophorus_couchianus
ENSMZEG00005007558	hnrnpd	100	89.937	ENSXMAG00000019151	hnrnpd	100	93.082	Xiphophorus_maculatus