EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007561 (Gene tree)
Gene ID: 101467765
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4474 bases
Position: chrLG22:19100243-19104716
Accession: 101467765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005009964	SHS2_Rpb7-N	PF03876.17	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010330	-	2693	XM_004547941	ENSMZEP00005009964	401 (aa)	XP_004547998	UPI00032A1D71

Gene Model

Click here to download ENSMZEG00005007561's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007561	twistnb	78	46.178	ENSG00000105849	TWISTNB	58	54.315	Homo_sapiens
ENSMZEG00005007561	twistnb	94	69.974	ENSAPOG00000011796	twistnb	100	70.757	Acanthochromis_polyacanthus
ENSMZEG00005007561	twistnb	52	53.589	ENSAMEG00000008558	TWISTNB	51	54.950	Ailuropoda_melanoleuca
ENSMZEG00005007561	twistnb	91	78.049	ENSACIG00000020400	twistnb	96	76.667	Amphilophus_citrinellus
ENSMZEG00005007561	twistnb	93	69.816	ENSAOCG00000024200	twistnb	99	70.604	Amphiprion_ocellaris
ENSMZEG00005007561	twistnb	93	69.554	ENSAPEG00000016750	twistnb	99	71.129	Amphiprion_percula
ENSMZEG00005007561	twistnb	89	67.598	ENSATEG00000017956	twistnb	95	68.056	Anabas_testudineus
ENSMZEG00005007561	twistnb	78	45.687	ENSANAG00000026418	TWISTNB	92	42.388	Aotus_nancymaae
ENSMZEG00005007561	twistnb	100	100.000	ENSACLG00000022280	twistnb	100	100.000	Astatotilapia_calliptera
ENSMZEG00005007561	twistnb	51	55.814	ENSAMXG00000035868	twistnb	65	55.814	Astyanax_mexicanus
ENSMZEG00005007561	twistnb	77	46.688	ENSBTAG00000006721	TWISTNB	91	45.399	Bos_taurus
ENSMZEG00005007561	twistnb	78	47.284	ENSCJAG00000001148	TWISTNB	58	55.330	Callithrix_jacchus
ENSMZEG00005007561	twistnb	77	47.604	ENSCHIG00000024078	TWISTNB	91	43.636	Capra_hircus
ENSMZEG00005007561	twistnb	77	46.417	ENSTSYG00000001471	TWISTNB	92	42.183	Carlito_syrichta
ENSMZEG00005007561	twistnb	82	46.407	ENSCPOG00000031651	TWISTNB	87	47.403	Cavia_porcellus
ENSMZEG00005007561	twistnb	78	44.586	ENSCATG00000035621	TWISTNB	91	41.538	Cercocebus_atys
ENSMZEG00005007561	twistnb	78	44.586	ENSCSAG00000013544	TWISTNB	91	41.538	Chlorocebus_sabaeus
ENSMZEG00005007561	twistnb	75	45.695	ENSCANG00000038759	TWISTNB	87	42.173	Colobus_angolensis_palliatus
ENSMZEG00005007561	twistnb	87	60.326	ENSCVAG00000014324	twistnb	95	55.956	Cyprinodon_variegatus
ENSMZEG00005007561	twistnb	57	55.022	ENSDARG00000024416	twistnb	58	55.022	Danio_rerio
ENSMZEG00005007561	twistnb	89	45.000	ENSEASG00005021702	TWISTNB	65	51.528	Equus_asinus_asinus
ENSMZEG00005007561	twistnb	51	54.106	ENSECAG00000014563	TWISTNB	65	51.528	Equus_caballus
ENSMZEG00005007561	twistnb	92	54.111	ENSELUG00000000098	TWISTNB	96	52.210	Esox_lucius
ENSMZEG00005007561	twistnb	76	40.190	ENSFALG00000009761	TWISTNB	51	54.487	Ficedula_albicollis
ENSMZEG00005007561	twistnb	90	59.239	ENSFHEG00000013318	twistnb	95	57.910	Fundulus_heteroclitus
ENSMZEG00005007561	twistnb	88	60.763	ENSGAFG00000018309	twistnb	95	57.584	Gambusia_affinis
ENSMZEG00005007561	twistnb	63	68.254	ENSGACG00000006425	twistnb	93	68.254	Gasterosteus_aculeatus
ENSMZEG00005007561	twistnb	78	44.409	ENSGGOG00000026888	TWISTNB	58	54.315	Gorilla_gorilla
ENSMZEG00005007561	twistnb	100	99.501	ENSHBUG00000020155	twistnb	100	99.501	Haplochromis_burtoni
ENSMZEG00005007561	twistnb	83	47.198	ENSHGLG00000010976	TWISTNB	55	57.297	Heterocephalus_glaber_female
ENSMZEG00005007561	twistnb	89	56.140	ENSHCOG00000010590	twistnb	96	56.030	Hippocampus_comes
ENSMZEG00005007561	twistnb	92	48.670	ENSIPUG00000004117	twistnb	95	49.859	Ictalurus_punctatus
ENSMZEG00005007561	twistnb	94	60.212	ENSKMAG00000001591	twistnb	100	60.743	Kryptolebias_marmoratus
ENSMZEG00005007561	twistnb	94	65.885	ENSLBEG00000024225	twistnb	100	66.230	Labrus_bergylta
ENSMZEG00005007561	twistnb	92	45.553	ENSLACG00000010508	TWISTNB	61	55.204	Latimeria_chalumnae
ENSMZEG00005007561	twistnb	78	44.268	ENSMFAG00000045328	TWISTNB	91	41.538	Macaca_fascicularis
ENSMZEG00005007561	twistnb	87	42.980	ENSMMUG00000009609	TWISTNB	90	41.538	Macaca_mulatta
ENSMZEG00005007561	twistnb	78	43.949	ENSMNEG00000041159	TWISTNB	91	41.231	Macaca_nemestrina
ENSMZEG00005007561	twistnb	78	44.586	ENSMLEG00000042783	TWISTNB	91	41.538	Mandrillus_leucophaeus
ENSMZEG00005007561	twistnb	73	47.635	ENSMOCG00000003458	Twistnb	59	58.115	Microtus_ochrogaster
ENSMZEG00005007561	twistnb	94	60.152	ENSMMOG00000020085	twistnb	100	59.645	Mola_mola
ENSMZEG00005007561	twistnb	89	58.886	ENSMALG00000016407	twistnb	95	58.355	Monopterus_albus
ENSMZEG00005007561	twistnb	94	97.340	ENSNBRG00000008652	twistnb	100	97.340	Neolamprologus_brichardi
ENSMZEG00005007561	twistnb	75	46.053	ENSNLEG00000035755	TWISTNB	55	55.435	Nomascus_leucogenys
ENSMZEG00005007561	twistnb	73	44.702	ENSOPRG00000016109	TWISTNB	87	42.453	Ochotona_princeps
ENSMZEG00005007561	twistnb	85	47.701	ENSODEG00000007222	TWISTNB	93	44.713	Octodon_degus
ENSMZEG00005007561	twistnb	95	65.526	ENSORLG00000004005	twistnb	89	65.957	Oryzias_latipes
ENSMZEG00005007561	twistnb	94	64.721	ENSORLG00020002579	twistnb	95	65.642	Oryzias_latipes_hni
ENSMZEG00005007561	twistnb	100	64.677	ENSORLG00015013403	twistnb	89	66.223	Oryzias_latipes_hsok
ENSMZEG00005007561	twistnb	77	46.226	ENSOARG00000009803	TWISTNB	90	44.073	Ovis_aries
ENSMZEG00005007561	twistnb	86	43.228	ENSPPAG00000034623	TWISTNB	58	54.315	Pan_paniscus
ENSMZEG00005007561	twistnb	78	43.344	ENSPPRG00000005877	TWISTNB	59	55.102	Panthera_pardus
ENSMZEG00005007561	twistnb	78	44.728	ENSPTRG00000018962	TWISTNB	58	54.315	Pan_troglodytes
ENSMZEG00005007561	twistnb	80	48.318	ENSPKIG00000025635	twistnb	68	51.587	Paramormyrops_kingsleyae
ENSMZEG00005007561	twistnb	89	63.612	ENSPMGG00000019023	twistnb	94	62.060	Periophthalmus_magnuspinnatus
ENSMZEG00005007561	twistnb	76	42.857	ENSPCIG00000017456	TWISTNB	91	40.741	Phascolarctos_cinereus
ENSMZEG00005007561	twistnb	77	46.774	ENSPPYG00000017752	TWISTNB	55	57.297	Pongo_abelii
ENSMZEG00005007561	twistnb	94	99.734	ENSPNYG00000002674	twistnb	100	99.734	Pundamilia_nyererei
ENSMZEG00005007561	twistnb	89	42.659	ENSPNAG00000011956	twistnb	97	43.889	Pygocentrus_nattereri
ENSMZEG00005007561	twistnb	75	45.695	ENSRBIG00000043007	TWISTNB	54	56.216	Rhinopithecus_bieti
ENSMZEG00005007561	twistnb	75	45.695	ENSRROG00000040155	TWISTNB	87	45.659	Rhinopithecus_roxellana
ENSMZEG00005007561	twistnb	94	64.286	ENSSMAG00000012792	twistnb	100	65.344	Scophthalmus_maximus
ENSMZEG00005007561	twistnb	94	68.407	ENSSDUG00000007038	twistnb	100	68.668	Seriola_dumerili
ENSMZEG00005007561	twistnb	81	38.066	ENSSPUG00000007595	TWISTNB	61	49.744	Sphenodon_punctatus
ENSMZEG00005007561	twistnb	94	68.407	ENSSPAG00000005871	twistnb	100	68.930	Stegastes_partitus
ENSMZEG00005007561	twistnb	80	43.155	ENSSSCG00000025298	TWISTNB	65	52.273	Sus_scrofa
ENSMZEG00005007561	twistnb	84	58.631	ENSTNIG00000017778	twistnb	96	58.055	Tetraodon_nigroviridis
ENSMZEG00005007561	twistnb	77	43.789	ENSTBEG00000003554	TWISTNB	62	52.336	Tupaia_belangeri
ENSMZEG00005007561	twistnb	62	71.654	ENSXCOG00000020199	twistnb	98	59.249	Xiphophorus_couchianus