EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007676 (Gene tree)
Gene ID: 101485192
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 274008 bases
Position: chrLG10:7761720-8035727
Accession: 101485192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005010162	RRM_1	PF00076.22	3.3e-33	1	2
ENSMZEP00005010162	RRM_1	PF00076.22	3.3e-33	2	2
ENSMZEP00005010199	RRM_1	PF00076.22	3.9e-33	1	2
ENSMZEP00005010199	RRM_1	PF00076.22	3.9e-33	2	2
ENSMZEP00005010146	RRM_1	PF00076.22	7.4e-33	1	2
ENSMZEP00005010146	RRM_1	PF00076.22	7.4e-33	2	2
ENSMZEP00005010177	RRM_1	PF00076.22	7.4e-33	1	2
ENSMZEP00005010177	RRM_1	PF00076.22	7.4e-33	2	2
ENSMZEP00005010231	RRM_1	PF00076.22	6.8e-29	1	2
ENSMZEP00005010231	RRM_1	PF00076.22	6.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010531	-	1111	XM_004557383	ENSMZEP00005010162	307 (aa)	XP_004557440	-
ENSMZET00005010514	-	1411	XM_004557374	ENSMZEP00005010146	407 (aa)	XP_004557431	UPI0003298607
ENSMZET00005010568	-	1174	XM_023152787	ENSMZEP00005010199	328 (aa)	XP_023008555	UPI00032A10D2
ENSMZET00005010600	-	942	-	ENSMZEP00005010231	313 (aa)	-	-
ENSMZET00005010546	-	1440	XM_004557376	ENSMZEP00005010177	407 (aa)	XP_004557433	UPI0003299AE3

Gene Model

Click here to download ENSMZEG00005007676's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007676	msi2a	100	92.378	ENSG00000153944	MSI2	100	92.378	Homo_sapiens
ENSMZEG00005007676	msi2a	100	99.588	ENSAPOG00000001658	msi2a	100	99.588	Acanthochromis_polyacanthus
ENSMZEG00005007676	msi2a	98	84.049	ENSAMEG00000002697	MSI2	99	88.000	Ailuropoda_melanoleuca
ENSMZEG00005007676	msi2a	95	100.000	ENSACIG00000009475	msi2a	100	90.511	Amphilophus_citrinellus
ENSMZEG00005007676	msi2a	56	91.111	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSMZEG00005007676	msi2a	100	99.361	ENSAPEG00000007706	msi2a	100	99.361	Amphiprion_percula
ENSMZEG00005007676	msi2a	94	92.446	ENSATEG00000003301	-	100	92.446	Anabas_testudineus
ENSMZEG00005007676	msi2a	100	99.588	ENSATEG00000010498	msi2a	100	99.588	Anabas_testudineus
ENSMZEG00005007676	msi2a	90	92.935	ENSACAG00000005452	MSI2	88	75.603	Anolis_carolinensis
ENSMZEG00005007676	msi2a	100	92.378	ENSANAG00000037827	MSI2	100	92.378	Aotus_nancymaae
ENSMZEG00005007676	msi2a	100	100.000	ENSACLG00000007752	msi2a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005007676	msi2a	100	95.885	ENSAMXG00000010474	msi2b	100	93.930	Astyanax_mexicanus
ENSMZEG00005007676	msi2a	100	95.885	ENSAMXG00000032796	msi2a	100	93.921	Astyanax_mexicanus
ENSMZEG00005007676	msi2a	94	92.834	ENSBTAG00000004406	MSI2	97	92.834	Bos_taurus
ENSMZEG00005007676	msi2a	76	59.919	WBGene00003423	msi-1	73	62.069	Caenorhabditis_elegans
ENSMZEG00005007676	msi2a	100	92.378	ENSCJAG00000013998	MSI2	100	92.378	Callithrix_jacchus
ENSMZEG00005007676	msi2a	94	87.379	ENSCAFG00020025620	MSI2	81	86.520	Canis_lupus_dingo
ENSMZEG00005007676	msi2a	100	91.463	ENSCHIG00000016580	MSI2	100	91.463	Capra_hircus
ENSMZEG00005007676	msi2a	94	87.943	ENSCPOG00000034042	MSI2	99	87.943	Cavia_porcellus
ENSMZEG00005007676	msi2a	100	92.378	ENSCCAG00000033927	MSI2	100	92.378	Cebus_capucinus
ENSMZEG00005007676	msi2a	99	92.000	ENSCATG00000040879	MSI2	100	92.073	Cercocebus_atys
ENSMZEG00005007676	msi2a	100	87.572	ENSCLAG00000014325	MSI2	100	87.572	Chinchilla_lanigera
ENSMZEG00005007676	msi2a	100	92.378	ENSCSAG00000005633	MSI2	100	92.378	Chlorocebus_sabaeus
ENSMZEG00005007676	msi2a	89	65.591	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSMZEG00005007676	msi2a	94	94.089	ENSCPBG00000009942	MSI2	89	93.923	Chrysemys_picta_bellii
ENSMZEG00005007676	msi2a	87	53.659	ENSCING00000018579	-	90	53.110	Ciona_intestinalis
ENSMZEG00005007676	msi2a	87	54.000	ENSCSAVG00000010397	-	95	57.143	Ciona_savignyi
ENSMZEG00005007676	msi2a	99	92.000	ENSCANG00000036414	MSI2	100	87.963	Colobus_angolensis_palliatus
ENSMZEG00005007676	msi2a	100	91.793	ENSCGRG00001013330	Msi2	100	91.793	Cricetulus_griseus_chok1gshd
ENSMZEG00005007676	msi2a	98	83.792	ENSCGRG00000003141	Msi2	100	87.730	Cricetulus_griseus_crigri
ENSMZEG00005007676	msi2a	61	77.596	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSMZEG00005007676	msi2a	100	80.793	ENSCSEG00000003266	-	100	80.793	Cynoglossus_semilaevis
ENSMZEG00005007676	msi2a	81	80.412	ENSCSEG00000013557	msi2a	79	92.308	Cynoglossus_semilaevis
ENSMZEG00005007676	msi2a	96	99.588	ENSCVAG00000017075	msi2a	99	99.000	Cyprinodon_variegatus
ENSMZEG00005007676	msi2a	100	93.939	ENSDARG00000033901	msi2a	100	84.275	Danio_rerio
ENSMZEG00005007676	msi2a	97	96.813	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSMZEG00005007676	msi2a	94	92.708	ENSDNOG00000014501	MSI2	100	92.708	Dasypus_novemcinctus
ENSMZEG00005007676	msi2a	55	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSMZEG00005007676	msi2a	81	81.218	ENSDORG00000005394	Msi2	79	89.231	Dipodomys_ordii
ENSMZEG00005007676	msi2a	95	55.840	FBgn0260943	Rbp6	90	64.626	Drosophila_melanogaster
ENSMZEG00005007676	msi2a	72	71.711	ENSETEG00000012450	-	64	71.711	Echinops_telfairi
ENSMZEG00005007676	msi2a	93	63.898	ENSEBUG00000006732	msi2a	75	79.524	Eptatretus_burgeri
ENSMZEG00005007676	msi2a	94	89.967	ENSEASG00005002965	MSI2	97	81.429	Equus_asinus_asinus
ENSMZEG00005007676	msi2a	100	85.311	ENSECAG00000011435	MSI2	100	85.311	Equus_caballus
ENSMZEG00005007676	msi2a	86	77.381	ENSEEUG00000007810	MSI2	100	77.075	Erinaceus_europaeus
ENSMZEG00005007676	msi2a	100	95.492	ENSELUG00000001361	msi2b	100	88.060	Esox_lucius
ENSMZEG00005007676	msi2a	100	94.888	ENSELUG00000011747	msi2a	100	94.888	Esox_lucius
ENSMZEG00005007676	msi2a	51	75.000	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSMZEG00005007676	msi2a	100	92.378	ENSFCAG00000041686	MSI2	100	92.378	Felis_catus
ENSMZEG00005007676	msi2a	97	85.047	ENSFDAG00000016118	MSI2	100	88.000	Fukomys_damarensis
ENSMZEG00005007676	msi2a	100	99.588	ENSFHEG00000000084	msi2a	100	99.509	Fundulus_heteroclitus
ENSMZEG00005007676	msi2a	59	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSMZEG00005007676	msi2a	100	86.705	ENSGALG00000005567	MSI2	100	86.705	Gallus_gallus
ENSMZEG00005007676	msi2a	96	90.492	ENSGAFG00000006974	msi2a	95	98.077	Gambusia_affinis
ENSMZEG00005007676	msi2a	100	89.057	ENSGAGG00000016542	MSI2	100	84.539	Gopherus_agassizii
ENSMZEG00005007676	msi2a	99	92.000	ENSGGOG00000013182	MSI2	100	87.963	Gorilla_gorilla
ENSMZEG00005007676	msi2a	100	100.000	ENSHBUG00000020800	msi2a	100	100.000	Haplochromis_burtoni
ENSMZEG00005007676	msi2a	100	78.613	ENSHGLG00000012444	MSI2	100	78.613	Heterocephalus_glaber_female
ENSMZEG00005007676	msi2a	78	83.575	ENSHGLG00100003744	MSI2	100	83.575	Heterocephalus_glaber_male
ENSMZEG00005007676	msi2a	55	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSMZEG00005007676	msi2a	95	82.031	ENSHCOG00000017241	-	98	71.571	Hippocampus_comes
ENSMZEG00005007676	msi2a	100	98.280	ENSHCOG00000000266	msi2a	100	98.280	Hippocampus_comes
ENSMZEG00005007676	msi2a	98	94.650	ENSIPUG00000021097	msi2a	100	94.650	Ictalurus_punctatus
ENSMZEG00005007676	msi2a	100	95.885	ENSIPUG00000003732	msi2b	100	89.776	Ictalurus_punctatus
ENSMZEG00005007676	msi2a	94	87.943	ENSSTOG00000007884	MSI2	99	87.943	Ictidomys_tridecemlineatus
ENSMZEG00005007676	msi2a	78	78.392	ENSJJAG00000006292	-	100	77.889	Jaculus_jaculus
ENSMZEG00005007676	msi2a	55	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSMZEG00005007676	msi2a	100	99.177	ENSKMAG00000009494	msi2a	97	99.203	Kryptolebias_marmoratus
ENSMZEG00005007676	msi2a	100	99.588	ENSLBEG00000007061	msi2a	100	99.509	Labrus_bergylta
ENSMZEG00005007676	msi2a	89	86.010	ENSLBEG00000026223	-	96	86.010	Labrus_bergylta
ENSMZEG00005007676	msi2a	55	92.941	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSMZEG00005007676	msi2a	95	96.708	ENSLOCG00000004675	msi2b	100	88.206	Lepisosteus_oculatus
ENSMZEG00005007676	msi2a	99	92.000	ENSMFAG00000003775	MSI2	100	87.963	Macaca_fascicularis
ENSMZEG00005007676	msi2a	99	92.000	ENSMMUG00000002069	MSI2	100	87.963	Macaca_mulatta
ENSMZEG00005007676	msi2a	100	92.378	ENSMNEG00000045275	MSI2	100	92.378	Macaca_nemestrina
ENSMZEG00005007676	msi2a	99	92.000	ENSMLEG00000033888	MSI2	100	87.963	Mandrillus_leucophaeus
ENSMZEG00005007676	msi2a	98	94.239	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSMZEG00005007676	msi2a	100	99.588	ENSMAMG00000010503	msi2a	100	99.588	Mastacembelus_armatus
ENSMZEG00005007676	msi2a	100	87.032	ENSMAUG00000003862	Msi2	100	87.032	Mesocricetus_auratus
ENSMZEG00005007676	msi2a	100	72.673	ENSMICG00000032913	-	96	79.710	Microcebus_murinus
ENSMZEG00005007676	msi2a	100	92.378	ENSMICG00000013598	-	100	92.378	Microcebus_murinus
ENSMZEG00005007676	msi2a	100	87.283	ENSMOCG00000005820	Msi2	100	87.283	Microtus_ochrogaster
ENSMZEG00005007676	msi2a	96	90.741	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSMZEG00005007676	msi2a	78	83.092	ENSMODG00000014790	MSI2	100	83.092	Monodelphis_domestica
ENSMZEG00005007676	msi2a	100	99.602	ENSMALG00000000071	msi2a	100	99.588	Monopterus_albus
ENSMZEG00005007676	msi2a	100	92.073	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSMZEG00005007676	msi2a	100	92.073	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSMZEG00005007676	msi2a	100	92.073	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSMZEG00005007676	msi2a	100	92.073	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSMZEG00005007676	msi2a	94	93.160	ENSMPUG00000015377	MSI2	97	93.160	Mustela_putorius_furo
ENSMZEG00005007676	msi2a	98	88.961	ENSMLUG00000007865	MSI2	97	92.834	Myotis_lucifugus
ENSMZEG00005007676	msi2a	100	87.283	ENSNGAG00000017807	Msi2	100	87.283	Nannospalax_galili
ENSMZEG00005007676	msi2a	100	100.000	ENSNBRG00000014596	msi2a	100	100.000	Neolamprologus_brichardi
ENSMZEG00005007676	msi2a	94	92.000	ENSNLEG00000008059	MSI2	96	92.417	Nomascus_leucogenys
ENSMZEG00005007676	msi2a	72	82.895	ENSOPRG00000000872	-	64	82.895	Ochotona_princeps
ENSMZEG00005007676	msi2a	100	87.572	ENSODEG00000011974	MSI2	100	87.572	Octodon_degus
ENSMZEG00005007676	msi2a	62	100.000	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSMZEG00005007676	msi2a	93	91.880	ENSOANG00000005667	MSI2	99	78.723	Ornithorhynchus_anatinus
ENSMZEG00005007676	msi2a	94	93.160	ENSOCUG00000010440	MSI2	97	93.160	Oryctolagus_cuniculus
ENSMZEG00005007676	msi2a	100	99.588	ENSORLG00000009671	msi2a	100	99.588	Oryzias_latipes
ENSMZEG00005007676	msi2a	100	99.754	ENSORLG00020021556	msi2a	100	99.754	Oryzias_latipes_hni
ENSMZEG00005007676	msi2a	100	99.588	ENSORLG00015004592	msi2a	100	99.588	Oryzias_latipes_hsok
ENSMZEG00005007676	msi2a	96	99.660	ENSOMEG00000000146	msi2a	100	99.588	Oryzias_melastigma
ENSMZEG00005007676	msi2a	94	89.577	ENSOGAG00000005621	MSI2	99	89.577	Otolemur_garnettii
ENSMZEG00005007676	msi2a	97	85.047	ENSPPAG00000037697	MSI2	100	87.963	Pan_paniscus
ENSMZEG00005007676	msi2a	94	93.160	ENSPPRG00000001848	MSI2	94	93.160	Panthera_pardus
ENSMZEG00005007676	msi2a	78	74.895	ENSPTIG00000021873	-	91	74.895	Panthera_tigris_altaica
ENSMZEG00005007676	msi2a	94	87.460	ENSPTIG00000021678	MSI2	96	87.460	Panthera_tigris_altaica
ENSMZEG00005007676	msi2a	99	92.000	ENSPTRG00000009437	MSI2	100	87.963	Pan_troglodytes
ENSMZEG00005007676	msi2a	100	92.378	ENSPANG00000022319	MSI2	100	92.378	Papio_anubis
ENSMZEG00005007676	msi2a	96	89.490	ENSPKIG00000007038	-	96	92.593	Paramormyrops_kingsleyae
ENSMZEG00005007676	msi2a	52	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSMZEG00005007676	msi2a	100	94.697	ENSPSIG00000008618	MSI2	100	80.941	Pelodiscus_sinensis
ENSMZEG00005007676	msi2a	100	98.722	ENSPMGG00000005888	msi2a	100	98.722	Periophthalmus_magnuspinnatus
ENSMZEG00005007676	msi2a	55	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSMZEG00005007676	msi2a	100	85.876	ENSPCIG00000006063	MSI2	100	85.876	Phascolarctos_cinereus
ENSMZEG00005007676	msi2a	61	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSMZEG00005007676	msi2a	62	100.000	ENSPLAG00000000436	msi2a	76	96.479	Poecilia_latipinna
ENSMZEG00005007676	msi2a	56	100.000	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSMZEG00005007676	msi2a	100	99.263	ENSPREG00000000881	msi2a	100	99.263	Poecilia_reticulata
ENSMZEG00005007676	msi2a	94	89.496	ENSPPYG00000008244	-	100	89.496	Pongo_abelii
ENSMZEG00005007676	msi2a	90	63.866	ENSPCAG00000010552	MSI2	95	89.231	Procavia_capensis
ENSMZEG00005007676	msi2a	55	95.420	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSMZEG00005007676	msi2a	94	84.983	ENSPVAG00000017053	MSI2	100	84.983	Pteropus_vampyrus
ENSMZEG00005007676	msi2a	100	100.000	ENSPNYG00000018393	msi2a	100	100.000	Pundamilia_nyererei
ENSMZEG00005007676	msi2a	100	94.225	ENSPNAG00000014957	msi2a	100	94.225	Pygocentrus_nattereri
ENSMZEG00005007676	msi2a	100	93.631	ENSPNAG00000000844	msi2b	100	93.631	Pygocentrus_nattereri
ENSMZEG00005007676	msi2a	94	92.446	ENSRNOG00000025338	Msi2	100	92.446	Rattus_norvegicus
ENSMZEG00005007676	msi2a	51	73.626	ENSRBIG00000032064	-	84	88.158	Rhinopithecus_bieti
ENSMZEG00005007676	msi2a	55	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSMZEG00005007676	msi2a	94	92.411	ENSSBOG00000026425	MSI2	100	87.963	Saimiri_boliviensis_boliviensis
ENSMZEG00005007676	msi2a	97	85.047	ENSSHAG00000008672	MSI2	100	87.963	Sarcophilus_harrisii
ENSMZEG00005007676	msi2a	97	86.799	ENSSFOG00015021687	-	97	92.793	Scleropages_formosus
ENSMZEG00005007676	msi2a	95	83.265	ENSSFOG00015012168	msi2b	100	68.531	Scleropages_formosus
ENSMZEG00005007676	msi2a	100	99.754	ENSSMAG00000018484	msi2a	100	99.754	Scophthalmus_maximus
ENSMZEG00005007676	msi2a	100	99.509	ENSSDUG00000014507	msi2a	100	99.588	Seriola_dumerili
ENSMZEG00005007676	msi2a	100	84.320	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSMZEG00005007676	msi2a	100	99.588	ENSSLDG00000017172	msi2a	100	99.588	Seriola_lalandi_dorsalis
ENSMZEG00005007676	msi2a	62	92.405	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSMZEG00005007676	msi2a	100	99.588	ENSSPAG00000017793	msi2a	100	99.588	Stegastes_partitus
ENSMZEG00005007676	msi2a	100	92.378	ENSSSCG00000038505	MSI2	100	93.004	Sus_scrofa
ENSMZEG00005007676	msi2a	78	83.575	ENSTGUG00000008452	MSI2	100	83.575	Taeniopygia_guttata
ENSMZEG00005007676	msi2a	97	98.477	ENSTRUG00000021248	msi2a	95	98.477	Takifugu_rubripes
ENSMZEG00005007676	msi2a	79	77.273	ENSTBEG00000001241	MSI2	73	77.273	Tupaia_belangeri
ENSMZEG00005007676	msi2a	94	84.034	ENSTTRG00000002189	MSI2	91	94.079	Tursiops_truncatus
ENSMZEG00005007676	msi2a	94	93.160	ENSUAMG00000000700	MSI2	97	93.160	Ursus_americanus
ENSMZEG00005007676	msi2a	93	91.440	ENSUMAG00000000505	MSI2	100	93.264	Ursus_maritimus
ENSMZEG00005007676	msi2a	59	81.868	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSMZEG00005007676	msi2a	100	92.784	ENSVVUG00000011783	MSI2	100	91.694	Vulpes_vulpes
ENSMZEG00005007676	msi2a	96	98.438	ENSXCOG00000006113	msi2a	100	93.612	Xiphophorus_couchianus
ENSMZEG00005007676	msi2a	100	99.509	ENSXMAG00000000608	msi2a	100	99.509	Xiphophorus_maculatus