EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005007718 (Gene tree)
Gene ID: 101478303
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 18729 bases
Position: chrLG23:37003705-37022433
Accession: 101478303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005010215	RNase_Zc3h12a	PF11977.8	6.5e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005010584	-	6709	XM_004573592	ENSMZEP00005010215	963 (aa)	XP_004573649	UPI000329BE77

Gene Model

Click here to download ENSMZEG00005007718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005007718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005007718	-	83	49.287	ENSAPOG00000001632	-	83	73.824	Acanthochromis_polyacanthus
ENSMZEG00005007718	-	79	83.984	ENSAPOG00000015355	-	82	83.464	Acanthochromis_polyacanthus
ENSMZEG00005007718	-	100	74.250	ENSACIG00000001362	-	97	75.670	Amphilophus_citrinellus
ENSMZEG00005007718	-	99	85.965	ENSAOCG00000003866	-	98	86.716	Amphiprion_ocellaris
ENSMZEG00005007718	-	72	80.258	ENSAPEG00000018582	-	99	86.441	Amphiprion_percula
ENSMZEG00005007718	-	100	78.395	ENSAPEG00000005727	-	99	87.315	Amphiprion_percula
ENSMZEG00005007718	-	83	48.201	ENSATEG00000002260	-	83	81.116	Anabas_testudineus
ENSMZEG00005007718	-	100	84.070	ENSATEG00000004134	-	100	83.762	Anabas_testudineus
ENSMZEG00005007718	-	100	99.896	ENSACLG00000027924	-	100	99.896	Astatotilapia_calliptera
ENSMZEG00005007718	-	64	53.736	ENSACLG00000018493	-	99	44.039	Astatotilapia_calliptera
ENSMZEG00005007718	-	83	47.872	ENSCSEG00000008542	-	99	44.161	Cynoglossus_semilaevis
ENSMZEG00005007718	-	86	77.984	ENSCSEG00000010073	-	96	83.860	Cynoglossus_semilaevis
ENSMZEG00005007718	-	100	76.543	ENSCVAG00000002328	-	100	76.410	Cyprinodon_variegatus
ENSMZEG00005007718	-	83	50.118	ENSELUG00000005470	-	100	47.473	Esox_lucius
ENSMZEG00005007718	-	83	57.875	ENSELUG00000009319	-	95	57.805	Esox_lucius
ENSMZEG00005007718	-	91	87.500	ENSFHEG00000021225	-	100	87.500	Fundulus_heteroclitus
ENSMZEG00005007718	-	70	50.000	ENSGMOG00000017975	-	100	50.000	Gadus_morhua
ENSMZEG00005007718	-	100	74.333	ENSGAFG00000005290	-	100	73.895	Gambusia_affinis
ENSMZEG00005007718	-	72	71.347	ENSGACG00000014201	-	100	77.565	Gasterosteus_aculeatus
ENSMZEG00005007718	-	72	46.341	ENSGACG00000001339	-	99	45.143	Gasterosteus_aculeatus
ENSMZEG00005007718	-	100	99.585	ENSHBUG00000006831	-	100	99.585	Haplochromis_burtoni
ENSMZEG00005007718	-	100	63.731	ENSHCOG00000008878	-	99	87.755	Hippocampus_comes
ENSMZEG00005007718	-	100	76.078	ENSKMAG00000011694	-	100	75.897	Kryptolebias_marmoratus
ENSMZEG00005007718	-	97	79.514	ENSLBEG00000012554	-	99	84.577	Labrus_bergylta
ENSMZEG00005007718	-	83	47.642	ENSLBEG00000012710	-	99	45.535	Labrus_bergylta
ENSMZEG00005007718	-	100	79.837	ENSLBEG00000003547	-	100	79.594	Labrus_bergylta
ENSMZEG00005007718	-	99	76.875	ENSMAMG00000021794	-	98	87.454	Mastacembelus_armatus
ENSMZEG00005007718	-	83	49.940	ENSMAMG00000020372	-	99	44.653	Mastacembelus_armatus
ENSMZEG00005007718	-	64	53.736	ENSMZEG00005019137	-	90	70.323	Maylandia_zebra
ENSMZEG00005007718	-	83	48.317	ENSMMOG00000019526	-	79	49.041	Mola_mola
ENSMZEG00005007718	-	91	84.722	ENSMMOG00000005728	-	99	84.069	Mola_mola
ENSMZEG00005007718	-	100	80.639	ENSMALG00000010501	-	100	80.844	Monopterus_albus
ENSMZEG00005007718	-	100	98.962	ENSNBRG00000006978	-	100	98.962	Neolamprologus_brichardi
ENSMZEG00005007718	-	64	51.962	ENSNBRG00000012175	-	90	70.323	Neolamprologus_brichardi
ENSMZEG00005007718	-	100	97.720	ENSONIG00000012268	-	100	97.720	Oreochromis_niloticus
ENSMZEG00005007718	-	86	79.831	ENSORLG00000029243	-	99	79.688	Oryzias_latipes
ENSMZEG00005007718	-	100	75.415	ENSORLG00020017005	-	100	76.349	Oryzias_latipes_hni
ENSMZEG00005007718	-	100	75.519	ENSORLG00015015211	-	100	75.723	Oryzias_latipes_hsok
ENSMZEG00005007718	-	100	76.971	ENSOMEG00000006666	-	100	77.098	Oryzias_melastigma
ENSMZEG00005007718	-	66	78.481	ENSPMGG00000009790	-	98	78.797	Periophthalmus_magnuspinnatus
ENSMZEG00005007718	-	100	75.873	ENSPLAG00000009867	-	100	75.437	Poecilia_latipinna
ENSMZEG00005007718	-	86	63.636	ENSPMEG00000011676	-	99	42.079	Poecilia_mexicana
ENSMZEG00005007718	-	100	76.289	ENSPMEG00000006624	-	100	75.851	Poecilia_mexicana
ENSMZEG00005007718	-	100	75.951	ENSPREG00000010838	-	100	75.514	Poecilia_reticulata
ENSMZEG00005007718	-	83	47.094	ENSPREG00000001607	-	73	80.263	Poecilia_reticulata
ENSMZEG00005007718	-	99	45.102	ENSSMAG00000007258	-	99	45.294	Scophthalmus_maximus
ENSMZEG00005007718	-	100	83.436	ENSSMAG00000007545	-	100	82.582	Scophthalmus_maximus
ENSMZEG00005007718	-	100	85.656	ENSSDUG00000021864	-	100	85.451	Seriola_dumerili
ENSMZEG00005007718	-	83	51.130	ENSSDUG00000013237	-	90	66.225	Seriola_dumerili
ENSMZEG00005007718	-	100	85.553	ENSSLDG00000012268	-	100	85.246	Seriola_lalandi_dorsalis
ENSMZEG00005007718	-	83	51.313	ENSSLDG00000004886	-	99	46.608	Seriola_lalandi_dorsalis
ENSMZEG00005007718	-	99	46.521	ENSSPAG00000001850	-	99	45.726	Stegastes_partitus
ENSMZEG00005007718	-	100	88.386	ENSSPAG00000009485	-	100	88.181	Stegastes_partitus
ENSMZEG00005007718	-	99	75.542	ENSTRUG00000022519	-	99	75.514	Takifugu_rubripes
ENSMZEG00005007718	-	62	76.333	ENSTNIG00000014519	-	97	90.244	Tetraodon_nigroviridis
ENSMZEG00005007718	-	83	47.337	ENSXMAG00000014715	-	83	80.435	Xiphophorus_maculatus
ENSMZEG00005007718	-	100	75.231	ENSXMAG00000027171	-	100	75.103	Xiphophorus_maculatus